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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:1470312..1471448+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_54246-T1 ID=ASPNIDRAFT_54246-T1|Name=ASPNIDRAFT_54246-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1137bp|location=Sequence derived from alignment at ACJE01000020.1:1470312..1471448+ (Aspergillus niger ATCC 1015)
CACCGGCTTTACTGCCAGCCACGCAACTCACTCTCCAGCTTGTCATTTTC
GCCCCAAACTTGACGACTTTTGCCCGCCATGGCTCCTTCAAAGTGGGGTA
TGTCCTCTTTTGGAGATTTTTGTGGCCCTCGCCCGCAATAGGGACATACA
TTGCGGGACAACATGGCGAATCATTCACGATACTGACGGCTTCTTTCAGA
TGACGAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGCCCGCCGCAAGT
TCGACGACGAGGAAGAGGAAGATGTGAGTTTTTGCCGCCCCTCCCCCCTC
CTTTTCCATTTTTGCCTCACAATTTGCCCCGCGCTGTTTCTCTTGGCCTC
AGTCGCTGAAAACTCGCGCCCCCCCCCCCCCCCCCCCCATCATTTTTTCC
CCCGTCCACGATCTGACCGAATGAACTAGGTCCTCGACTCCTGGGACGCC
GCCGAAGATTCCGAAGTAGAGCGTGAGAAGGCCGCCAAGGCAGCGGAGGC
CAAGGCTAAGGCCGAAGCCGAAGCCGCCGCCAACAAGAAGAGCAAGGCAC
AGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGCAGATGCCGATGCTGAG
GATTCGGACGACAGCGACGAGGACGAGGCCGAGCGGAGAGCCCGTCTCCG
CAAGACGGAGAAGGACGCTGACCTTAAGCACGCCGAGGACCTGTTCGGCG
ACATCGACCTGAACCGTATGCGCAACCGCAGCGCCCCCAAGGCCGTTGTC
ATCAGTGACGGGACCGACCCGACCCAGGCCGTCGATCTGTCGGCTATGCC
TCTCTTCAAGCCCGCCACCAAGGACCAGTTCACCCGCGTTACGACCACCC
TTATCCCTCTGTTGACGACCCAGTCGAAGAAGCCCCAGTATGCTCTGTGG
GCGCAGGACTTCATCAAGCAGCTCGTCAAGGACCTGCCCAGCGGTGATGT
CAAAAAGATCGCTTCCTCGCTGACTACTCTCAGCAATGAGAAGATGAAGG
AGGAGCGTGCTGCCGATAAGGGTAACAAGAAGACCAAGGCGGCCAAGACC
AAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGATTGAAACCAACTCTTA
TGATGATGATGGGTTGGATGACGATGACTTCATGTGA back to topCoding sequence (CDS) from alignment at ACJE01000020.1:1470312..1471448+ >ASPNIDRAFT_54246-T1 ID=ASPNIDRAFT_54246-T1|Name=ASPNIDRAFT_54246-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2403bp|location=Sequence derived from alignment at ACJE01000020.1:1470312..1471448+ (Aspergillus niger ATCC 1015)
ATGGCTCCTTCAAAGTGGGATGACGAAGAAGAGAGTGTCTCTCCCCCTCC
TGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTCCTCG
ACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAAGGCCGCC
AAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCGCCAACAA
GAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGCAG
ATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAGCGG
AGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGCCGA
GGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCGCCC
CCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTCGAT
CTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCACCCG
CGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGCCCC
AGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGACCTG
CCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAGCAA
TGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGACCA
AGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGATT
GAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCATGTG
AATGGCTCCTTCAAAGTGGGATGACGAAGAAGAGAGTGTCTCTCCCCCTC
CTGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTCCTC
GACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAAGGCCGC
CAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCGCCAACA
AGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGCA
GATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAGCG
GAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGCCG
AGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCGCC
CCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTCGA
TCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCACCC
GCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGCCC
CAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGACCT
GCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAGCA
ATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGACC
AAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGAT
TGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCATGT
GAATGGCTCCTTCAAAGTGGGATGACGAAGAAGAGAGTGTCTCTCCCCCT
CCTGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTCCT
CGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAAGGCCG
CCAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCGCCAAC
AAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGC
AGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAGC
GGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGCC
GAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCGC
CCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTCG
ATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCACC
CGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGCC
CCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGACC
TGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAGC
AATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGAC
CAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGA
TTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCATG
TGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023194 |
| DBxref | InterPro:IPR013906 |
| DBxref | PFAM:PF08597 |
| Product | Translation initiation factor 3 subunit J component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:1470312..1471448 + |
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