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ASPNIDRAFT_54258-T1, ASPNIDRAFT_54258-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54258-T1
Unique NameASPNIDRAFT_54258-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1544019..1545317-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54258-T1 ID=ASPNIDRAFT_54258-T1|Name=ASPNIDRAFT_54258-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1299bp|location=Sequence derived from alignment at ACJE01000020.1:1544019..1545317- (Aspergillus niger ATCC 1015)
AAGATCCAGAGATTGAACCCCCTTTGAGTCAGGTCATCTCCGATTGAGTC
CTTCTTGATTCCGTGGTTCCATCTTTTACTGCTTTGGAAACCTTTCCCGT
TCCGGCGCTCGGCTCGCTCCCTCCTGGTCGGGTCATCCGAAAGCTCCAGC
TAGACTAGTACTACTATCTACTGACTCGATACACATCCCACCCGCAGCTG
CGACGTAAAACAGCTGCAAGCAAGAAGGGAGGGTTTCTAACCCGAGAACG
GACTGGTTAGTCAACCCACATCCCTCACGAACTGGATCGCTGTCCTCTGG
GGCGTACAGAACCAGTGTTTCTGCAACGCAGACGCTTCTGCAGCGCTTGT
CTGTCGGTCAGTGATCGGATTACACCGCGTCTTTACCAGTCGTATGGCGT
CTTCTCTTTCGAGTCAACGGACCTTATCGGGGTTTCCTTTACTCACTGCC
GAGGAATTTGAAACCGCCTGTCACGCCTTTCTAGGTCGGGTTCACGTGGT
GGATGATAGCAAGGTGGGATGGTCCTCCATCCGTCTCGATCAGCGGGTAA
GTTAGTTGCCTCGCTTCAGGTCGTTCGGCTTTGTTCCACCCTCCTTCTCT
TGTTGGCTGTCGCTTGAGGGAAAGAATCATGGGAATCTGCGCGACAGTGA
TTGGAACATTGGCTAGGAAGATGGCCTGAACTATACACATCAATCCTTTT
CCCCTTTCTTTTTTTCCCCCCCTCCTCTTCACCCTCCCCCTGCTACACCC
CACTCCTAGCTAAATCCATTAGGCAACCGGGCCCATCTTGAGTATTGCAA
GGGATATCGGTCATGTGGGTACTCGTGATCGCGACGAGCCCCTCCCGGAC
CCAGAGATGAACGAAGAACTACAGTGGAAGGCCTCGGAAGAAGATCCCGT
CCGTCGAGCTGGAACCCTTTCCATTCCGCTCTCAATTTTAAAAGTATCGT
CTAACATCAAACAGGAAGCTCTCATTCGTGCGCCCGAGACCAGTGTCCAT
TTACAGGTGATTTATAATATTCTGCTTTCTCCCACGTACCACGTCCCTGT
CTTGTATTTCCAGTTACGGCAGGACAACCATCCGGGGCCGCTGGGAATTG
ACGCAGTCTACCAATACCTGGTACCGGAACAGTACAGAAAGGAACTCCAG
AGCATTGGCATCATGGGTGGTATTAGTTTTGGCGTATGTGCAAGTTCTCG
AATCCCTAGCCCAAGCTGGAGCTTATGCTTCGTAGTATCGTCCAGACTCC
GGAACTCCAGCATTTTTCGTTCATCCATGCCAAACAACGGATGCGATGA
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Coding sequence (CDS) from alignment at ACJE01000020.1:1544019..1545317-

>ASPNIDRAFT_54258-T1 ID=ASPNIDRAFT_54258-T1|Name=ASPNIDRAFT_54258-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1962bp|location=Sequence derived from alignment at ACJE01000020.1:1544019..1545317- (Aspergillus niger ATCC 1015)
CCCAAGCTGGAGCTTATGCTTCGTAGTATCGTCCAGACTCCGGAACTCCA
GCATTTTTCGTTCATCCATGCCAAACAACGGATGCGATGAGCAACCGGGC
CCATCTTGAGTATTGCAAGGGATATCGGTCATGTGGGTACTCGTGATCGC
GACGAGCCCCTCCCGGACCCAGAGATGAACGAAGAACTACAGTGGAAGGC
CTCGGAAGAAGATCCCGTCCGTCGAGCTGGAACCCTTTCCATTCCGCTCT
CAATTTTAAAAGTATCGTCTAACATCAAACAGGAAGCTCTCATTCGTGCG
CCCGAGACCAGTGTCCATTTACAGGTGATTTATAATATTCTGCTTTCTCC
CACGTACCACGTCCCTGTCTTGTATTTCCAGTTACGGCAGGACAACCATC
CGGGGCCGCTGGGAATTGACGCAGTCTACCAATACCTGGTACCGGAACAG
TACAGAAAGGAACTCCAGAGCATTGGCATCATGGGTGGTATTAGTTTTGG
CATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGGGTTTCCTTTAC
TCACTGCCGAGGAATTTGAAACCGCCTGTCACGCCTTTCTAGGTCGGGTT
CACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATCCGTCTCGATCA
GCGGCCCAAGCTGGAGCTTATGCTTCGTAGTATCGTCCAGACTCCGGAAC
TCCAGCATTTTTCGTTCATCCATGCCAAACAACGGATGCGATGAGCAACC
GGGCCCATCTTGAGTATTGCAAGGGATATCGGTCATGTGGGTACTCGTGA
TCGCGACGAGCCCCTCCCGGACCCAGAGATGAACGAAGAACTACAGTGGA
AGGCCTCGGAAGAAGATCCCGTCCGTCGAGCTGGAACCCTTTCCATTCCG
CTCTCAATTTTAAAAGTATCGTCTAACATCAAACAGGAAGCTCTCATTCG
TGCGCCCGAGACCAGTGTCCATTTACAGGTGATTTATAATATTCTGCTTT
CTCCCACGTACCACGTCCCTGTCTTGTATTTCCAGTTACGGCAGGACAAC
CATCCGGGGCCGCTGGGAATTGACGCAGTCTACCAATACCTGGTACCGGA
ACAGTACAGAAAGGAACTCCAGAGCATTGGCATCATGGGTGGTATTAGTT
TTGGCATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGGGTTTCCT
TTACTCACTGCCGAGGAATTTGAAACCGCCTGTCACGCCTTTCTAGGTCG
GGTTCACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATCCGTCTCG
ATCAGCGGCCCAAGCTGGAGCTTATGCTTCGTAGTATCGTCCAGACTCCG
GAACTCCAGCATTTTTCGTTCATCCATGCCAAACAACGGATGCGATGAGC
AACCGGGCCCATCTTGAGTATTGCAAGGGATATCGGTCATGTGGGTACTC
GTGATCGCGACGAGCCCCTCCCGGACCCAGAGATGAACGAAGAACTACAG
TGGAAGGCCTCGGAAGAAGATCCCGTCCGTCGAGCTGGAACCCTTTCCAT
TCCGCTCTCAATTTTAAAAGTATCGTCTAACATCAAACAGGAAGCTCTCA
TTCGTGCGCCCGAGACCAGTGTCCATTTACAGGTGATTTATAATATTCTG
CTTTCTCCCACGTACCACGTCCCTGTCTTGTATTTCCAGTTACGGCAGGA
CAACCATCCGGGGCCGCTGGGAATTGACGCAGTCTACCAATACCTGGTAC
CGGAACAGTACAGAAAGGAACTCCAGAGCATTGGCATCATGGGTGGTATT
AGTTTTGGCATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGGGTT
TCCTTTACTCACTGCCGAGGAATTTGAAACCGCCTGTCACGCCTTTCTAG
GTCGGGTTCACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATCCGT
CTCGATCAGCGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54258ASPNIDRAFT_54258Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54258-T1ASPNIDRAFT_54258-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54258-T1.cdsASPNIDRAFT_54258-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54258-T1.exon3ASPNIDRAFT_54258-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54258-T1.exon2ASPNIDRAFT_54258-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54258-T1.exon1ASPNIDRAFT_54258-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54258-T1.utr5p1ASPNIDRAFT_54258-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007135
DBxrefPFAM:PF03987
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1544019..1545317 -
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