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ASPNIDRAFT_54618-T1, ASPNIDRAFT_54618-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54618-T1
Unique NameASPNIDRAFT_54618-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:417890..419073+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54618-T1 ID=ASPNIDRAFT_54618-T1|Name=ASPNIDRAFT_54618-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1184bp|location=Sequence derived from alignment at ACJE01000016.1:417890..419073+ (Aspergillus niger ATCC 1015)
CTTGCTTGTTCGCTTTCCTTATCCTTTCCCCCTTTGATATTTTCCCTCGT
GCTCCTGGCTGACCTTTGGTCCCTCATCTCTGCTTTCCCCCCCGTCATCT
CCCGTTGCCTCTCTTCCTCCCCTCCCTCTCTCCCTTTGCCATCCAGCTGT
TTGTGGTCATCATGAACAGCTTGGTGGCTACACCACCTGTGCCTCCTCAT
CACTTTTACGAATACTCCCGTCCTTCTCCCTCCCGTCCAAGTAAGCATCT
CCCTGTCTTTTCCCAGGGCATTCGATGATAATTCCCTTGCTATGTGACCT
TTGATGACTGACTGATATCAGTGTCTACCCCCATTCACACTCCCAACAAC
CGCAAACGGAAAGCCGACGATGAGAATGATCACGATGGTCGAATGTCAGC
ATCACCTACCAACTCTCCCGCCTTGACCCCGAGAACCCTTCCAGTCAACC
GAAACATCAAGCGTGCTCGTCCGAATGTTAGCGGACGGCCTCTCGCTCTC
CCCCGACTGCTGGAGACCTTGGACACAGACGCTCTTCGGGGCATCCTTCG
GACCGTGTGTGAGCGTCATCCAGGTTTGGTTGATGAAGTGGTGCACACAG
CACCTCGACCCAGCGTGGCATCTGCCCTTCAAGTCCTTCGACATTACGAA
TCTGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTCCGAATCAGATTA
TGCATACAATCGTGTCCGACAACCGCTGGGGAATCTTCTAGATGCTCTGA
GCGACTTCACTCCACATTTCCTACCCCCTCACGAGACGCAGTCGTCTGTT
TCCTTGAGTTACCTGGATGGTGCGACCGACATAATTCACGCACTGCCCCG
TTGGAGTACACCACAGAACAACCTCGAGCGGGATTCTGCATACGATGAGA
TCTGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCCAAGCGTGGTGGT
GGAATTCAGTTACAATACGGTGGTTGGGATCAGAAGTTGGCGAAGCACAA
TCACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACGAGCTTGGTTCCA
GTTTGGGATGGATGCACAGACCGGATGCCCAAGGTTATGGAAGCCCAGGC
GGCAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTCGGGCACATACGG
GCTCGGTACCCCCGTCAAGGTTGGGCCATGGTGA
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Coding sequence (CDS) from alignment at ACJE01000016.1:417890..419073+

>ASPNIDRAFT_54618-T1 ID=ASPNIDRAFT_54618-T1|Name=ASPNIDRAFT_54618-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1884bp|location=Sequence derived from alignment at ACJE01000016.1:417890..419073+ (Aspergillus niger ATCC 1015)
ATGAACAGCTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGA
ATACTCCCGTCCTTCTCCCTCCCGTCCAATGTCTACCCCCATTCACACTC
CCAACAACCGCAAACGGAAAGCCGACGATGAGAATGATCACGATGGTCGA
ATGTCAGCATCACCTACCAACTCTCCCGCCTTGACCCCGAGAACCCTTCC
AGTCAACCGAAACATCAAGCGTGCTCGTCCGAATGTTAGCGGACGGCCTC
TCGCTCTCCCCCGACTGCTGGAGACCTTGGACACAGACGCTCTTCGGGGC
ATCCTTCGGACCGTGTGTGAGCGTCATCCAGGTTTGGTTGATGAAGTGGT
GCACACAGCACCTCGACCCAGCGTGGCATCTGCCCTTCAAGTCCTTCGAC
ATTACGAATCTGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTCCGAA
TCAGATTATGCATACAATCGTGTCCGACAACCGCTGGGGAATCTTCTAGA
TGCTCTGAGCGACTTCACTCCACATTTCCTACCCCCTCACGAGACGCAGT
CGTCTGTTTCCTTGAGTTACCTGGATGGTGCGACCGACATAATTCACGCA
CTGCCCCGTTGGAGTACACCACAGAACAACCTCGAGCGGGATTCTGCATA
CGATGAGATCTGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCCAAGC
GTGGTGGTGGAATTCAGTTACAATACGGTGGTTGGGATCAGAAGTTGGCG
AAGCACAATCACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACGAGCT
TGGTTCCAGTTTGGGATGGATGCACAGACCGGATGCCCAAGGTTATGGAA
GCCCAGGCGGCAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTCGGGC
ACATACGGGCTCGGTACCCCCGTCAAGGTTGGGCCATGGTGAATGAACAG
CTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGAATACTCCC
GTCCTTCTCCCTCCCGTCCAATGTCTACCCCCATTCACACTCCCAACAAC
CGCAAACGGAAAGCCGACGATGAGAATGATCACGATGGTCGAATGTCAGC
ATCACCTACCAACTCTCCCGCCTTGACCCCGAGAACCCTTCCAGTCAACC
GAAACATCAAGCGTGCTCGTCCGAATGTTAGCGGACGGCCTCTCGCTCTC
CCCCGACTGCTGGAGACCTTGGACACAGACGCTCTTCGGGGCATCCTTCG
GACCGTGTGTGAGCGTCATCCAGGTTTGGTTGATGAAGTGGTGCACACAG
CACCTCGACCCAGCGTGGCATCTGCCCTTCAAGTCCTTCGACATTACGAA
TCTGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTCCGAATCAGATTA
TGCATACAATCGTGTCCGACAACCGCTGGGGAATCTTCTAGATGCTCTGA
GCGACTTCACTCCACATTTCCTACCCCCTCACGAGACGCAGTCGTCTGTT
TCCTTGAGTTACCTGGATGGTGCGACCGACATAATTCACGCACTGCCCCG
TTGGAGTACACCACAGAACAACCTCGAGCGGGATTCTGCATACGATGAGA
TCTGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCCAAGCGTGGTGGT
GGAATTCAGTTACAATACGGTGGTTGGGATCAGAAGTTGGCGAAGCACAA
TCACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACGAGCTTGGTTCCA
GTTTGGGATGGATGCACAGACCGGATGCCCAAGGTTATGGAAGCCCAGGC
GGCAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTCGGGCACATACGG
GCTCGGTACCCCCGTCAAGGTTGGGCCATGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0071630nuclear protein quality control by the ubiquitin-proteasome system
GO:0031144proteasome localization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
STS1ASPNIDRAFT_54618Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54618-T1.utr5p1ASPNIDRAFT_54618-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54618-T1.exon1ASPNIDRAFT_54618-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54618-T1.exon2ASPNIDRAFT_54618-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54618-T1.cdsASPNIDRAFT_54618-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54618-T1ASPNIDRAFT_54618-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013868
DBxrefInterPro:IPR038422
DBxrefPFAM:PF08559
ProductTethering factor for nuclear proteasome sts1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:417890..419073 +
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