|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000015.1:1009994..1012164+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_54716-T1 ID=ASPNIDRAFT_54716-T1|Name=ASPNIDRAFT_54716-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2171bp|location=Sequence derived from alignment at ACJE01000015.1:1009994..1012164+ (Aspergillus niger ATCC 1015)
ACTTCTTGTCTTTCCCTCGGACACTCGGTCCGTCGCATCCTTACCTCCTT
AAACACGCATACCGCGGTCTCAATTGCGCGTGTTAATCCATCGCACTTTT
GCTTCCTCCCAACGAGATTGCGTCGGCATTTTGATCCTATAACTTGGTTG
ATATACCATTTTACATCTTCCACTTGTTCCTGACACTCCTCTGGCTGAGA
CCCTCCAGCCTCTGTCCCATCTGTCATCCGGTTGCCTCCCGCACTCCCTT
ACCTTCTTGGAGGCGCCCGTGCTCCCGTCCGTTCGTGGGGTTAATCGATC
GAGTCAGACGCTTTTAGAATTTCGGTCCGCGAGGCATGAGTGGCAGTTCG
AATCAGTCCACCCGTACGAGTCCAGGCTCCTACAGCACTACTCAGCGCAC
GCCCTCGGTCTCTTCGGGCGCGTCGCCTACCCACCAGCCGCTTTCGGCCT
CTCAAGCGCCCTCGACGGCTCAGAATGCGATGTCGACCGACGTGTACAAT
ACGCCCGCATCGCAGGCACCAACTTCGTTAGGTCCTTCGTTTAGCTACCC
TTTCTCCCCGATCGGCCCCTCTCCCGCTTTTGACAACGTTTCCTCGTCTG
CTATGCGTCTGGGCGACTCGGATCGGTCGGCGCAGGGCCTGAATGGCTTT
ATCCGACCGACAAATGGAACAGGTGGAGGCGCGATCCTCATGCGCAAACT
CCCGCGCAACACCAGTCGCGATGCTCTGCGCAGCATGCTACTCTTCGCCA
AAGATTTTGTGGATGCCGACTTTGTGCCTTCTGACGCTCCGGAGGATAAC
GGATACTTGTGTGCGGTCGCGCGTTTCAGCACCCTGGCTGCCGCGGAAGA
AGCACGAGCACTTCTCGACGGCAAACCAAATTCGAAGAACGACGCCACCA
TGATTGTGGAAATGTTCTACGGCTCCGTTGGTTCTTCCTTGGTGCCCAGG
CGAAACACAATCGACCACACCGCGACTCGGGGCTTACTGGGACATGTTAA
TGGAGGCTTACCGCGACAGTCGTCACGCTTCAACGGAACCTTCCAGACCT
TGGAGAAGCTGAGCGCGACCACGGGACCTGCTACCGCTGGTGATACCCTA
CCCCCATCTGAACCTGGCTCCCGGCTTCACAGTCTCTTCTCCCCCCAGTC
CCCGATCGGCAACGGCGTTCCCGAGCTCCCGCGGGTCAGTGGCAAATCGA
TGATTGATCAGGATATTGATGAAGATACTGGAGAGTTGCTCAAGGATCCT
GTGGGCTATGCCGAAAACGGGCATTCGTCTTCTGTTTCTGTCCCTCGACG
CTCCACGAACCCTCAGATTCTGGGTAACCAGTTTGCCAACATGTCTTTGT
CTGGCAATCTCAATTCCCCTCCACTACCTAATTATAACCAAGGAGGAAAC
ACGCACATTGGCGTTCCAAACCCTCCATCGACGTTCCCCCAACCGATGAA
CAATAACATCGGGACGGGCCATGTGTTCCCTTATGGTAATCCGCATGTAC
CTCGCCATAGTCTCCCTGCAGCCAACCCGAACGACATGAACCCTCCATGC
AATACATTATACGTGGGAAACTTACCCCCAGATACCTCAGAGGAGGAGCT
GAAGGCTCTGTTCTCGAAGCAGCGTGGATACAAGCGGTTGTGCTTCCGAA
ACAAACAGAACGGGCCGATGTGCTTCGTGGAATTTGACGATGTGGGCACC
GCTGGAAAAGCGCTAAACGAGCTGTATGGCGTGAAGTTGTCCAACAGTAT
CAAGACCGGTATCCGCCTAAGCTTTTCGAAGAACCCTCTCGGGGTCCGAT
CAGGACAGCCCGGGTCCATGAGCGCGTCTAATGCCATGGCCTCTCAAGGT
GGTGTGCCTGGGGGCAGTAGTCTTGGTGGAATGCACAATCACATGTTTTC
GACGGTCAGTGGACCGCCACCGGGCCTGTCTGCGCCCCCGGGTTTGGTTC
CACCCGTGGCAATCAGAAACAACGGTGCCATGCATCCCTCCGGGAGTCCA
AATGCGCCATTGCCCAGCAACGGTACTTTCAATGCCAATTCGGGACTGGG
AATCCGGACAAATCCGATGAACGCAATGGTGTCCCCGCCACCTCAGCTCA
CCGGCGGAGCTTCAGGACCCAATGTGGGTGGCTACAATTCCTACTACCCG
GATTATATGATGGGTCGGTAG back to topCoding sequence (CDS) from alignment at ACJE01000015.1:1009994..1012164+ >ASPNIDRAFT_54716-T1 ID=ASPNIDRAFT_54716-T1|Name=ASPNIDRAFT_54716-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1836bp|location=Sequence derived from alignment at ACJE01000015.1:1009994..1012164+ (Aspergillus niger ATCC 1015)
ATGAGTGGCAGTTCGAATCAGTCCACCCGTACGAGTCCAGGCTCCTACAG
CACTACTCAGCGCACGCCCTCGGTCTCTTCGGGCGCGTCGCCTACCCACC
AGCCGCTTTCGGCCTCTCAAGCGCCCTCGACGGCTCAGAATGCGATGTCG
ACCGACGTGTACAATACGCCCGCATCGCAGGCACCAACTTCGTTAGGTCC
TTCGTTTAGCTACCCTTTCTCCCCGATCGGCCCCTCTCCCGCTTTTGACA
ACGTTTCCTCGTCTGCTATGCGTCTGGGCGACTCGGATCGGTCGGCGCAG
GGCCTGAATGGCTTTATCCGACCGACAAATGGAACAGGTGGAGGCGCGAT
CCTCATGCGCAAACTCCCGCGCAACACCAGTCGCGATGCTCTGCGCAGCA
TGCTACTCTTCGCCAAAGATTTTGTGGATGCCGACTTTGTGCCTTCTGAC
GCTCCGGAGGATAACGGATACTTGTGTGCGGTCGCGCGTTTCAGCACCCT
GGCTGCCGCGGAAGAAGCACGAGCACTTCTCGACGGCAAACCAAATTCGA
AGAACGACGCCACCATGATTGTGGAAATGTTCTACGGCTCCGTTGGTTCT
TCCTTGGTGCCCAGGCGAAACACAATCGACCACACCGCGACTCGGGGCTT
ACTGGGACATGTTAATGGAGGCTTACCGCGACAGTCGTCACGCTTCAACG
GAACCTTCCAGACCTTGGAGAAGCTGAGCGCGACCACGGGACCTGCTACC
GCTGGTGATACCCTACCCCCATCTGAACCTGGCTCCCGGCTTCACAGTCT
CTTCTCCCCCCAGTCCCCGATCGGCAACGGCGTTCCCGAGCTCCCGCGGG
TCAGTGGCAAATCGATGATTGATCAGGATATTGATGAAGATACTGGAGAG
TTGCTCAAGGATCCTGTGGGCTATGCCGAAAACGGGCATTCGTCTTCTGT
TTCTGTCCCTCGACGCTCCACGAACCCTCAGATTCTGGGTAACCAGTTTG
CCAACATGTCTTTGTCTGGCAATCTCAATTCCCCTCCACTACCTAATTAT
AACCAAGGAGGAAACACGCACATTGGCGTTCCAAACCCTCCATCGACGTT
CCCCCAACCGATGAACAATAACATCGGGACGGGCCATGTGTTCCCTTATG
GTAATCCGCATGTACCTCGCCATAGTCTCCCTGCAGCCAACCCGAACGAC
ATGAACCCTCCATGCAATACATTATACGTGGGAAACTTACCCCCAGATAC
CTCAGAGGAGGAGCTGAAGGCTCTGTTCTCGAAGCAGCGTGGATACAAGC
GGTTGTGCTTCCGAAACAAACAGAACGGGCCGATGTGCTTCGTGGAATTT
GACGATGTGGGCACCGCTGGAAAAGCGCTAAACGAGCTGTATGGCGTGAA
GTTGTCCAACAGTATCAAGACCGGTATCCGCCTAAGCTTTTCGAAGAACC
CTCTCGGGGTCCGATCAGGACAGCCCGGGTCCATGAGCGCGTCTAATGCC
ATGGCCTCTCAAGGTGGTGTGCCTGGGGGCAGTAGTCTTGGTGGAATGCA
CAATCACATGTTTTCGACGGTCAGTGGACCGCCACCGGGCCTGTCTGCGC
CCCCGGGTTTGGTTCCACCCGTGGCAATCAGAAACAACGGTGCCATGCAT
CCCTCCGGGAGTCCAAATGCGCCATTGCCCAGCAACGGTACTTTCAATGC
CAATTCGGGACTGGGAATCCGGACAAATCCGATGAACGCAATGGTGTCCC
CGCCACCTCAGCTCACCGGCGGAGCTTCAGGACCCAATGTGGGTGGCTAC
AATTCCTACTACCCGGATTATATGATGGGTCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000015.1 | supercontig | ACJE01000015.1:1009994..1012164 + |
|
