You are here

Home

ASPNIDRAFT_54838-T1, ASPNIDRAFT_54838-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54838-T1
Unique NameASPNIDRAFT_54838-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:748542..750138-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54838-T1 ID=ASPNIDRAFT_54838-T1|Name=ASPNIDRAFT_54838-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1597bp|location=Sequence derived from alignment at ACJE01000003.1:748542..750138- (Aspergillus niger ATCC 1015)
ATGGCGGAAGGAGTCATCACCGATCATGACGCCATGGGCGAAAAGGCTGA
GATCTCTCATGAGGAGGTCGTCCATTTGGCGCAGTTGACGCCGGAGGAAA
AGATTCTGGAGAGGCAATTGCGGCGGCGGATTGACACCCTCATCATGCCG
TTGGTAATCCTTGTTTATCTGATGAATTACATCGACCGGTACGTCTCACA
GATTCCTGGCATCGGATTGTTTTGAGTTGCGATGTGCTGACGTCTTTCTT
GATAGGAATAATTACGCCGCTGCAAAGCTTCAAGGATTAGAACAGGACCT
CTCCCTCGATGAAGCCAAGTACGAGACAGGGCTGTCCATTCTATTTGTGG
GCTATATCCTGATGCAGGTCCCATCGAACCTGCTCCTCAACTACATGGGC
CGTCCTTCACTATACCTTGGCTTCTTCACCACAGCGTGGGGCCTTGTCTC
GGCCTTGACCAGCCAGGTCTCAAGCTACGGTGGCATCGTGGCGTGTCGGT
TTATTCTCGGCTTGGTCGAGGCACCATTCTTTGCAGGTGTTCTATTTTAC
CTCTCCAAATGGTACACCAAGAAAGAGTTGGCCCTCCGCATGAGTATCTT
CTACTCTGGCTCATTGCTCAGCGGTGCCTTTGGAAACCTGATCGCTGCGG
GCATCCTTAATGGTCTTGCCGGAAAGAGAGGCATGTCGGCCTGGCAATGG
TTATACATCATCGAGGGTACCATCACTGTCGCAATCGGTCTAGCCATCTG
CGCTGTGCTGCCCGACTTTCCCGATACCTGGAAACTGTTGTCGCCGGAGA
TGAAGCATGTCGCCAATCGTCGCTTGGCCATTGAGGCAGCCGAAGCGGAT
GTCGATGACGGCGACAAGATGACCCAAATCAAGGGTCTGAAGCTGGCCTT
CACGGACGTCAAGACTTACGCCCTGGCTATTGCATACATGTCTCTCACGG
CCGCAAGTGGCTTCCAGAACTTCTTTCCAACTCTGACAGAGACCCTGGGG
TACAACCATATCATCTCTCTGCTCTTGGTAGCGCCGCCATACATATTCAT
GGTGGTATACAGTCTCTTCCACTCCTATCTCTCTGATCGTTTCGCCCATC
GATTCTGGTTCTTTGTCGGCCCCATCCCCATCACCATCGTGGGGTTTATT
ATCTTCATGACCACCCACTCCTTCGGACCTCGGTATTTCTCATTTTTCCT
CATGGTCTTTGTCTTTGCTCAGAACGGCACGATATACTCGTGGATCGCGA
ATGCGATTCCACGGCCTCCTGCCAAACGAGCTGCTGCGTATGCCTTTATC
AACTCGCTGGGAAACTCGGCCAGTATCTGGACTCCGTATACCTATCTGGA
ACGAGAGGCACCGTATTACTATACAGCTTTGGGAGTGTGCATTGGCATGC
AAGTTCTTGGCACTATAATGGCGACATTCCTGTACTTCCATCTGCGGTCG
CAAAACAAGCGACTGGCACGCCTGGAGGATGAGGACGCAGTTTTGACTGA
TAAGGAGCTTCGTCGGCTACAGAAGACGGCGGAGGTAGAGGGCATCGACA
TCGCTGCCGCCCGCCAGCTCCAGAAGGGGTTCCGATATGTCACCTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000003.1:748542..750138-

>ASPNIDRAFT_54838-T1 ID=ASPNIDRAFT_54838-T1|Name=ASPNIDRAFT_54838-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3060bp|location=Sequence derived from alignment at ACJE01000003.1:748542..750138- (Aspergillus niger ATCC 1015)
GAATAATTACGCCGCTGCAAAGCTTCAAGGATTAGAACAGGACCTCTCCC
TCGATGAAGCCAAGTACGAGACAGGGCTGTCCATTCTATTTGTGGGCTAT
ATCCTGATGCAGGTCCCATCGAACCTGCTCCTCAACTACATGGGCCGTCC
TTCACTATACCTTGGCTTCTTCACCACAGCGTGGGGCCTTGTCTCGGCCT
TGACCAGCCAGGTCTCAAGCTACGGTGGCATCGTGGCGTGTCGGTTTATT
CTCGGCTTGGTCGAGGCACCATTCTTTGCAGGTGTTCTATTTTACCTCTC
CAAATGGTACACCAAGAAAGAGTTGGCCCTCCGCATGAGTATCTTCTACT
CTGGCTCATTGCTCAGCGGTGCCTTTGGAAACCTGATCGCTGCGGGCATC
CTTAATGGTCTTGCCGGAAAGAGAGGCATGTCGGCCTGGCAATGGTTATA
CATCATCGAGGGTACCATCACTGTCGCAATCGGTCTAGCCATCTGCGCTG
TGCTGCCCGACTTTCCCGATACCTGGAAACTGTTGTCGCCGGAGATGAAG
CATGTCGCCAATCGTCGCTTGGCCATTGAGGCAGCCGAAGCGGATGTCGA
TGACGGCGACAAGATGACCCAAATCAAGGGTCTGAAGCTGGCCTTCACGG
ACGTCAAGACTTACGCCCTGGCTATTGCATACATGTCTCTCACGGCCGCA
AGTGGCTTCCAGAACTTCTTTCCAACTCTGACAGAGACCCTGGGGTACAA
CCATATCATCTCTCTGCTCTTGGTAGCGCCGCCATACATATTCATGGTGG
TATACAGTCTCTTCCACTCCTATCTCTCTGATCGTTTCGCCCATCGATTC
TGGTTCTTTGTCGGCCCCATCCCCATCACCATCGTGGGGTTTATTATCTT
CATGACCACCCACTCCTTCGGACCTCGGTATTTCTCATTTTTCCTCATGG
TCTTTGTCTTTGCTCAGAACGGCACGATATACTCGTGGATCGCGAATGCG
ATTCCACGGCCTCCTGCCAAACGAGCTGCTGCGTATGCCTTTATCAACTC
GCTGGGAAACTCGGCCAGTATCTGGACTCCGTATACCTATCTGGAACGAG
AGGCACCGTATTACTATACAGCTTTGGGAGTGTGCATTGGCATGCAAGTT
CTTGGCACTATAATGGCGACATTCCTGTACTTCCATCTGCGGTCGCAAAA
CAAGCGACTGGCACGCCTGGAGGATGAGGACGCAGTTTTGACTGATAAGG
AGCTTCGTCGGCTACAGAAGACGGCGGAGGTAGAGGGCATCGACATCGCT
GCCGCCCGCCAGCTCCAGAAGGGGTTCCGATATGTCACCTAAATGGCGGA
AGGAGTCATCACCGATCATGACGCCATGGGCGAAAAGGCTGAGATCTCTC
ATGAGGAGGTCGTCCATTTGGCGCAGTTGACGCCGGAGGAAAAGATTCTG
GAGAGGCAATTGCGGCGGCGGATTGACACCCTCATCATGCCGTTGGTAAT
CCTTGTTTATCTGATGAATTACATCGACCGGAATAATTACGCCGCTGCAA
AGCTTCAAGGATTAGAACAGGACCTCTCCCTCGATGAAGCCAAGTACGAG
ACAGGGCTGTCCATTCTATTTGTGGGCTATATCCTGATGCAGGTCCCATC
GAACCTGCTCCTCAACTACATGGGCCGTCCTTCACTATACCTTGGCTTCT
TCACCACAGCGTGGGGCCTTGTCTCGGCCTTGACCAGCCAGGTCTCAAGC
TACGGTGGCATCGTGGCGTGTCGGTTTATTCTCGGCTTGGTCGAGGCACC
ATTCTTTGCAGGTGTTCTATTTTACCTCTCCAAATGGTACACCAAGAAAG
AGTTGGCCCTCCGCATGAGTATCTTCTACTCTGGCTCATTGCTCAGCGGT
GCCTTTGGAAACCTGATCGCTGCGGGCATCCTTAATGGTCTTGCCGGAAA
GAGAGGCATGTCGGCCTGGCAATGGTTATACATCATCGAGGGTACCATCA
CTGTCGCAATCGGTCTAGCCATCTGCGCTGTGCTGCCCGACTTTCCCGAT
ACCTGGAAACTGTTGTCGCCGGAGATGAAGCATGTCGCCAATCGTCGCTT
GGCCATTGAGGCAGCCGAAGCGGATGTCGATGACGGCGACAAGATGACCC
AAATCAAGGGTCTGAAGCTGGCCTTCACGGACGTCAAGACTTACGCCCTG
GCTATTGCATACATGTCTCTCACGGCCGCAAGTGGCTTCCAGAACTTCTT
TCCAACTCTGACAGAGACCCTGGGGTACAACCATATCATCTCTCTGCTCT
TGGTAGCGCCGCCATACATATTCATGGTGGTATACAGTCTCTTCCACTCC
TATCTCTCTGATCGTTTCGCCCATCGATTCTGGTTCTTTGTCGGCCCCAT
CCCCATCACCATCGTGGGGTTTATTATCTTCATGACCACCCACTCCTTCG
GACCTCGGTATTTCTCATTTTTCCTCATGGTCTTTGTCTTTGCTCAGAAC
GGCACGATATACTCGTGGATCGCGAATGCGATTCCACGGCCTCCTGCCAA
ACGAGCTGCTGCGTATGCCTTTATCAACTCGCTGGGAAACTCGGCCAGTA
TCTGGACTCCGTATACCTATCTGGAACGAGAGGCACCGTATTACTATACA
GCTTTGGGAGTGTGCATTGGCATGCAAGTTCTTGGCACTATAATGGCGAC
ATTCCTGTACTTCCATCTGCGGTCGCAAAACAAGCGACTGGCACGCCTGG
AGGATGAGGACGCAGTTTTGACTGATAAGGAGCTTCGTCGGCTACAGAAG
ACGGCGGAGGTAGAGGGCATCGACATCGCTGCCGCCCGCCAGCTCCAGAA
GGGGTTCCGATATGTCACCTAAATGGCGGAAGGAGTCATCACCGATCATG
ACGCCATGGGCGAAAAGGCTGAGATCTCTCATGAGGAGGTCGTCCATTTG
GCGCAGTTGACGCCGGAGGAAAAGATTCTGGAGAGGCAATTGCGGCGGCG
GATTGACACCCTCATCATGCCGTTGGTAATCCTTGTTTATCTGATGAATT
ACATCGACCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54838ASPNIDRAFT_54838Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54838-T1ASPNIDRAFT_54838-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54838-T1.cdsASPNIDRAFT_54838-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54838-T1.exon2ASPNIDRAFT_54838-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54838-T1.exon1ASPNIDRAFT_54838-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000031.4
NoteEggNog:ENOG41
NoteSMCOG1106:major facilitator transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:748542..750138 -
Powered by Drupal