|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000012.1:478764..480820+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_54886-T1 ID=ASPNIDRAFT_54886-T1|Name=ASPNIDRAFT_54886-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2057bp|location=Sequence derived from alignment at ACJE01000012.1:478764..480820+ (Aspergillus niger ATCC 1015)
GATTACGCCCGTTTGAATTCATCCGAACGAAAGAACTATCGCCGATAATC
TCTACATGCTCGAGTCTACCACGCCGTGCGCTTTCCGCTACAATGACCGA
CTATTCTAAATGGAAGGTGACCGATCTTAAAGCCGAGCTGAAGCGGCGCG
GCATCGCGCAGACCGGTCTCCGCGTGAAACAACAGATTATTGACCGATTG
GTGGAGGAAGACGCTCGCGATGAGAAGGATGCTGTTGCGAACGGAGAGCC
GGCTGCCGAACAGGATGTTGCGCCGCAGGAAGCGCAGCCCGTTGACGCGG
AACAGCCTGTGCCAGAGGCAGAGCCAGCCGCGGATGCGCCAGCTCAACCC
GAGGCTACTGAGTCTGAGGTGATTGACAAACAGACAGAGGAGCCAGCACA
GGAACAGGAACAACAACAGGCACAAACGGAGGAACAGGGTGATGCGGTTC
CTGAGTCGAAGCCTCAGCCGGTGACTGACGAAGCGCCTGCCGAACAGGCT
GCTGAGCAAGGACAGCAACAGGAACAGCCAGAGCAACCGGTCCAGGAATC
ACCGAAACCAGAGGAACCAGCTCAACCCACCGATACTACTACTGTTAACC
AACCCGCCGATACTTCCATCCCGCAAGACCAGACCGAGAATGACACCGCT
GCAGCACCGGTAGAGCAGGCTCCTGGAGAAGCAGCACCGGAACAGTCTGA
GGACATGGAGCCAAAACCTGCAGAACCAGCCGCATCTGGTGAGACCGCTG
CGCCGCCCGCGGCAGTCCCCTCGGAGATGAACACCGGGTTGTCGACACCC
CTGCCTACAGAAGAAATGCTGGAGGACAGACGCAAGAGGAAGCGTCGCAG
TCAGAGTCCTGTGCCAACACCGGAAGCGCTTGCAAGTAAAAAGGCCAAAG
CCCTAGATGAGACACCCCGTGTCGTCTTGCCCGAGGACCGGGCTGCGGTG
GACAAAGAACACGAGTCACGGCCGGACGAAGCTCTTTCCGGTCCGCAAGG
AACCCCTGAAGAACGCGCGGGGCGCGAGGCCGCGCCGGAGGAAGCCCCGC
CTGTGCAAGATGAAACATCCAAGAAAGGCGCCCCCCTGAAACATGACGTT
CGCTTCAAGGGGCTTTTTGCTGCCAAGGAGACGGAACAGACTCGCCCCGT
CTCCCCTCCACCGGCGGATGCGGTTATGGAAGATGCCGACGTCGAGCCTG
CCGTGCATGCTGCCACAGCAGCTCTCTATGTCGGCGGACTGATGCGTCCT
CTCCAGCCGGTCGCGCTCAAGAACCATCTTGTCAGTCTCGCGTCCCCTCC
GGATGCCTCACCCAATCCGGATGTGGTCGTAGACTTTTACCTGGACCCCA
TCAAGACACATTGCTTTGCTAGCTTTAGGTCTGTCTCAGCAGCGTCGCGA
GTCCGCACCGCCCTCCATGGTACAGTATGGCCCAACGAACGCAACCGCAA
GACTCTATTCGTGGACTTTATTCCCGAAGACAAGTTGTCCCTCTGGATTG
AGAAGGAAGAAGGATCGCGACAGCGTGGTGGCCCTCCGGCGCGCTGGGAA
GTGCGATATGAGCCAACTGATGATGGGGTAGAGGCTGTTCTCGAAGAGGT
TGATCCCCGAAGCGCTTCATCTCAGCATATGCGTGCACCTGACGCCTCAG
GATTCTCCCGTCCGCCGCCTACCGGGCCACGGGCGGAACTGGGCACTCCT
CGACGTCCCAGTGGCCCAGTCACGGCAGACTCGAGTTCACGACCTGGGCA
AGGATTCAAGCCGCTGGATGAACTTTTCATGTCTACTACTACGAAGCCCA
AGCTCTACTACCTACCGGTTCCTCGAGAAGTGGCCGACCGGCGTTTGGAT
CGGTTTGACGACCTGCTACGGAAGGGAGAGTTTCCCCGACGAGGAGGGGA
CGAGCGCCGTCGCATCACCTTCGAGGATGAAGATTTCTTCGTCGATAACG
GACCGGACTTTGGTGGTGGGCGCAACCGACGAGGCCGAGGCCGTGGTGGT
CGCGGACGTGGAGGATTCGGAGATTCGTGGAGAGATGACCGACGTAGTCG
GTATTGA back to topCoding sequence (CDS) from alignment at ACJE01000012.1:478764..480820+ >ASPNIDRAFT_54886-T1 ID=ASPNIDRAFT_54886-T1|Name=ASPNIDRAFT_54886-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1965bp|location=Sequence derived from alignment at ACJE01000012.1:478764..480820+ (Aspergillus niger ATCC 1015)
ATGACCGACTATTCTAAATGGAAGGTGACCGATCTTAAAGCCGAGCTGAA
GCGGCGCGGCATCGCGCAGACCGGTCTCCGCGTGAAACAACAGATTATTG
ACCGATTGGTGGAGGAAGACGCTCGCGATGAGAAGGATGCTGTTGCGAAC
GGAGAGCCGGCTGCCGAACAGGATGTTGCGCCGCAGGAAGCGCAGCCCGT
TGACGCGGAACAGCCTGTGCCAGAGGCAGAGCCAGCCGCGGATGCGCCAG
CTCAACCCGAGGCTACTGAGTCTGAGGTGATTGACAAACAGACAGAGGAG
CCAGCACAGGAACAGGAACAACAACAGGCACAAACGGAGGAACAGGGTGA
TGCGGTTCCTGAGTCGAAGCCTCAGCCGGTGACTGACGAAGCGCCTGCCG
AACAGGCTGCTGAGCAAGGACAGCAACAGGAACAGCCAGAGCAACCGGTC
CAGGAATCACCGAAACCAGAGGAACCAGCTCAACCCACCGATACTACTAC
TGTTAACCAACCCGCCGATACTTCCATCCCGCAAGACCAGACCGAGAATG
ACACCGCTGCAGCACCGGTAGAGCAGGCTCCTGGAGAAGCAGCACCGGAA
CAGTCTGAGGACATGGAGCCAAAACCTGCAGAACCAGCCGCATCTGGTGA
GACCGCTGCGCCGCCCGCGGCAGTCCCCTCGGAGATGAACACCGGGTTGT
CGACACCCCTGCCTACAGAAGAAATGCTGGAGGACAGACGCAAGAGGAAG
CGTCGCAGTCAGAGTCCTGTGCCAACACCGGAAGCGCTTGCAAGTAAAAA
GGCCAAAGCCCTAGATGAGACACCCCGTGTCGTCTTGCCCGAGGACCGGG
CTGCGGTGGACAAAGAACACGAGTCACGGCCGGACGAAGCTCTTTCCGGT
CCGCAAGGAACCCCTGAAGAACGCGCGGGGCGCGAGGCCGCGCCGGAGGA
AGCCCCGCCTGTGCAAGATGAAACATCCAAGAAAGGCGCCCCCCTGAAAC
ATGACGTTCGCTTCAAGGGGCTTTTTGCTGCCAAGGAGACGGAACAGACT
CGCCCCGTCTCCCCTCCACCGGCGGATGCGGTTATGGAAGATGCCGACGT
CGAGCCTGCCGTGCATGCTGCCACAGCAGCTCTCTATGTCGGCGGACTGA
TGCGTCCTCTCCAGCCGGTCGCGCTCAAGAACCATCTTGTCAGTCTCGCG
TCCCCTCCGGATGCCTCACCCAATCCGGATGTGGTCGTAGACTTTTACCT
GGACCCCATCAAGACACATTGCTTTGCTAGCTTTAGGTCTGTCTCAGCAG
CGTCGCGAGTCCGCACCGCCCTCCATGGTACAGTATGGCCCAACGAACGC
AACCGCAAGACTCTATTCGTGGACTTTATTCCCGAAGACAAGTTGTCCCT
CTGGATTGAGAAGGAAGAAGGATCGCGACAGCGTGGTGGCCCTCCGGCGC
GCTGGGAAGTGCGATATGAGCCAACTGATGATGGGGTAGAGGCTGTTCTC
GAAGAGGTTGATCCCCGAAGCGCTTCATCTCAGCATATGCGTGCACCTGA
CGCCTCAGGATTCTCCCGTCCGCCGCCTACCGGGCCACGGGCGGAACTGG
GCACTCCTCGACGTCCCAGTGGCCCAGTCACGGCAGACTCGAGTTCACGA
CCTGGGCAAGGATTCAAGCCGCTGGATGAACTTTTCATGTCTACTACTAC
GAAGCCCAAGCTCTACTACCTACCGGTTCCTCGAGAAGTGGCCGACCGGC
GTTTGGATCGGTTTGACGACCTGCTACGGAAGGGAGAGTTTCCCCGACGA
GGAGGGGACGAGCGCCGTCGCATCACCTTCGAGGATGAAGATTTCTTCGT
CGATAACGGACCGGACTTTGGTGGTGGGCGCAACCGACGAGGCCGAGGCC
GTGGTGGTCGCGGACGTGGAGGATTCGGAGATTCGTGGAGAGATGACCGA
CGTAGTCGGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR034257 |
| DBxref | InterPro:IPR032552 |
| DBxref | InterPro:IPR003034 |
| DBxref | InterPro:IPR036361 |
| DBxref | PFAM:PF02037 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000012.1 | supercontig | ACJE01000012.1:478764..480820 + |
|
