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ASPNIDRAFT_54938-T1, ASPNIDRAFT_54938-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54938-T1
Unique NameASPNIDRAFT_54938-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:872845..874545-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54938-T1 ID=ASPNIDRAFT_54938-T1|Name=ASPNIDRAFT_54938-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1701bp|location=Sequence derived from alignment at ACJE01000012.1:872845..874545- (Aspergillus niger ATCC 1015)
GGCAAATCGACCAGCCGTGAGGTATGTGACTTAATCATCTCTTTCCCGTT
CACCTTTGTCTTTGTGGTCATAGAACCATTGTCACCTCAGTTCCCTTTCT
CTTTTCACCGCTGACAGTTAGTATTCTAGCACCAGCAAGCCACACACTTA
ACGTCTTCTGGTCGTATCATATTGTTGCCTCGCCCAACATGAGCGCGGCT
CAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGAAGGTGAAGAAACT
CATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTCCATGATCTCTC
TTATCATTCGTACGTCTTCCGTCCAGTCAACTCGTCATTAGAATACTTCT
AATTATCGGTTCTTCTTTGCAGCCCCCAAGGATCAGATTTCTAGAGCAGC
AAAGATGTTGGCGGAAGAGTTTGTAAGTGGCTTGACTGAGGGAGACACGG
CCAGTCCAGTAAAGTTGCTAATCACATATTACAGGGCACTGCGTCTAACA
TCAAGTCTCGTGTCAACCGTCTTTCCGTCCTTTCCGCTATTACTTCGACG
CAACAACGTCTCAAGCTCTACAATAAGGTGCCGCCGAATGGTCTAGTGGT
TTATTGCGGTGAAATTATCACCTCTGAAGGAAAGGAGCGCAAGATCAACA
TTGATTTCGAGCCTTTCAAGCCAATCAACACCTCGTTGTATCTCTGTGAT
AACAAGTTCCACACTGAGGCTCTTAGTGAGCTTCTTGAATCCGATCAGAA
GTTTGGTTTCATCGTCATGGATGGAAACGGTGCCCTGTTCGGTACCTTGA
GCGGCAACACCAGAGAAATCCTGCAAAAGTTGAGCGTTGATCTGCCCAAG
AAGCACGGCCGTGGTGGTCAGTCAGCATTGCGTTTCGCTCGTCTTCGTGA
GGAGAAGCGCCACAACTACGTACGCAAGATTGCCGAGTTGGCTGTTCAGA
ACTACATCACCAATGACAAGGTCAATGTTGCAGGATTGATCTTGGCCGGT
TCTGCCGATTTTAAAAACGACCTGAATCAGTCCGATATGTTCGACCAGAG
ATTGCAGGCTAAGGTCATCAAGGTTGTCGACGTGTCTTATGGTGGCGAGA
ACGGCTTTAACCAGGCTATCGAACTGGCATCTGAGACCTTGAGCAACGTC
AAATTTGTTCAGGAGAAGAAGCTTATCGGAAAGTATTTCGAAGAAATCAG
TCAGGATACTGGAAAGGTCTGTTATGGCATTGACGATACATTGAAGGCTT
TGGAGCTTGGTGCGGCGGAGACACTGATCGTATATGAGAACCTTGACGTT
ACCCGGCACGTTCTCAAGAGCTCCAGCGGTTCGGATGTCGTCATCCACAC
TACCAAGTCACAGGAAGAGAACCGTGAACTGTTCATGGACAAGGAGACTG
GCGCTGAGATGGAAGTGAGCGAGCAGCAGTCGTTCCTTGAGTGGCTTGCT
GAAAGCTACAAGGACTTTGGAGCAACCCTGGAGTTCGTCTCCGACAAGTC
CAGTGAAGGAAATCAGTTTGTCAAAGGTTTCGGTGGTATCGGAGCCATCC
TTCGGTACAAGGTCAACTTTGAACAGCTTGCTGACTACGATGACGAGGAT
GAATTCTACGACGGTATGTTTAACTCAATGTCGGTGTTATTCGTGTGCTA
ACCACTCCCTATAGATTGACGGTTCAGCGGCCTCGCAGAGAGCGAGGATG
A
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Coding sequence (CDS) from alignment at ACJE01000012.1:872845..874545-

>ASPNIDRAFT_54938-T1 ID=ASPNIDRAFT_54938-T1|Name=ASPNIDRAFT_54938-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5472bp|location=Sequence derived from alignment at ACJE01000012.1:872845..874545- (Aspergillus niger ATCC 1015)
ATTGACGGTTCAGCGGCCTCGCAGAGAGCGAGGATGAGGCACTGCGTCTA
ACATCAAGTCTCGTGTCAACCGTCTTTCCGTCCTTTCCGCTATTACTTCG
ACGCAACAACGTCTCAAGCTCTACAATAAGGTGCCGCCGAATGGTCTAGT
GGTTTATTGCGGTGAAATTATCACCTCTGAAGGAAAGGAGCGCAAGATCA
ACATTGATTTCGAGCCTTTCAAGCCAATCAACACCTCGTTGTATCTCTGT
GATAACAAGTTCCACACTGAGGCTCTTAGTGAGCTTCTTGAATCCGATCA
GAAGTTTGGTTTCATCGTCATGGATGGAAACGGTGCCCTGTTCGGTACCT
TGAGCGGCAACACCAGAGAAATCCTGCAAAAGTTGAGCGTTGATCTGCCC
AAGAAGCACGGCCGTGGTGGTCAGTCAGCATTGCGTTTCGCTCGTCTTCG
TGAGGAGAAGCGCCACAACTACGTACGCAAGATTGCCGAGTTGGCTGTTC
AGAACTACATCACCAATGACAAGGTCAATGTTGCAGGATTGATCTTGGCC
GGTTCTGCCGATTTTAAAAACGACCTGAATCAGTCCGATATGTTCGACCA
GAGATTGCAGGCTAAGGTCATCAAGGTTGTCGACGTGTCTTATGGTGGCG
AGAACGGCTTTAACCAGGCTATCGAACTGGCATCTGAGACCTTGAGCAAC
GTCAAATTTGTTCAGGAGAAGAAGCTTATCGGAAAGTATTTCGAAGAAAT
CAGTCAGGATACTGGAAAGGTCTGTTATGGCATTGACGATACATTGAAGG
CTTTGGAGCTTGGTGCGGCGGAGACACTGATCGTATATGAGAACCTTGAC
GTTACCCGGCACGTTCTCAAGAGCTCCAGCGGTTCGGATGTCGTCATCCA
CACTACCAAGTCACAGGAAGAGAACCGTGAACTGTTCATGGACAAGGAGA
CTGGCGCTGAGATGGAAGTGAGCGAGCAGCAGTCGTTCCTTGAGTGGCTT
GCTGAAAGCTACAAGGACTTTGGAGCAACCCTGGAGTTCGTCTCCGACAA
GTCCAGTGAAGGAAATCAGTTTGTCAAAGGTTTCGGTGGTATCGGAGCCA
TCCTTCGGTACAAGGTCAACTTTGAACAGCTTGCTGACTACGATGACGAG
GATGAATTCTACGACGGTATGTTTAACTCAATGTCGGTGTTATTCGTCCC
CCAAGGATCAGATTTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTATG
AGCGCGGCTCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGAAGGT
GAAGAAACTCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTCCA
TGATCTCTCTTATCATTCATTGACGGTTCAGCGGCCTCGCAGAGAGCGAG
GATGAGGCACTGCGTCTAACATCAAGTCTCGTGTCAACCGTCTTTCCGTC
CTTTCCGCTATTACTTCGACGCAACAACGTCTCAAGCTCTACAATAAGGT
GCCGCCGAATGGTCTAGTGGTTTATTGCGGTGAAATTATCACCTCTGAAG
GAAAGGAGCGCAAGATCAACATTGATTTCGAGCCTTTCAAGCCAATCAAC
ACCTCGTTGTATCTCTGTGATAACAAGTTCCACACTGAGGCTCTTAGTGA
GCTTCTTGAATCCGATCAGAAGTTTGGTTTCATCGTCATGGATGGAAACG
GTGCCCTGTTCGGTACCTTGAGCGGCAACACCAGAGAAATCCTGCAAAAG
TTGAGCGTTGATCTGCCCAAGAAGCACGGCCGTGGTGGTCAGTCAGCATT
GCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCCACAACTACGTACGCAAGA
TTGCCGAGTTGGCTGTTCAGAACTACATCACCAATGACAAGGTCAATGTT
GCAGGATTGATCTTGGCCGGTTCTGCCGATTTTAAAAACGACCTGAATCA
GTCCGATATGTTCGACCAGAGATTGCAGGCTAAGGTCATCAAGGTTGTCG
ACGTGTCTTATGGTGGCGAGAACGGCTTTAACCAGGCTATCGAACTGGCA
TCTGAGACCTTGAGCAACGTCAAATTTGTTCAGGAGAAGAAGCTTATCGG
AAAGTATTTCGAAGAAATCAGTCAGGATACTGGAAAGGTCTGTTATGGCA
TTGACGATACATTGAAGGCTTTGGAGCTTGGTGCGGCGGAGACACTGATC
GTATATGAGAACCTTGACGTTACCCGGCACGTTCTCAAGAGCTCCAGCGG
TTCGGATGTCGTCATCCACACTACCAAGTCACAGGAAGAGAACCGTGAAC
TGTTCATGGACAAGGAGACTGGCGCTGAGATGGAAGTGAGCGAGCAGCAG
TCGTTCCTTGAGTGGCTTGCTGAAAGCTACAAGGACTTTGGAGCAACCCT
GGAGTTCGTCTCCGACAAGTCCAGTGAAGGAAATCAGTTTGTCAAAGGTT
TCGGTGGTATCGGAGCCATCCTTCGGTACAAGGTCAACTTTGAACAGCTT
GCTGACTACGATGACGAGGATGAATTCTACGACGGTATGTTTAACTCAAT
GTCGGTGTTATTCGTCCCCCAAGGATCAGATTTCTAGAGCAGCAAAGATG
TTGGCGGAAGAGTTTATGAGCGCGGCTCAGCCGAACGAAGCGGAGAAGAA
CATCGAGATATGGAAGGTGAAGAAACTCATTAAGCGGCTTGAGGCCGCTA
GAGGAAACGGAACCTCCATGATCTCTCTTATCATTCATTGACGGTTCAGC
GGCCTCGCAGAGAGCGAGGATGAGGCACTGCGTCTAACATCAAGTCTCGT
GTCAACCGTCTTTCCGTCCTTTCCGCTATTACTTCGACGCAACAACGTCT
CAAGCTCTACAATAAGGTGCCGCCGAATGGTCTAGTGGTTTATTGCGGTG
AAATTATCACCTCTGAAGGAAAGGAGCGCAAGATCAACATTGATTTCGAG
CCTTTCAAGCCAATCAACACCTCGTTGTATCTCTGTGATAACAAGTTCCA
CACTGAGGCTCTTAGTGAGCTTCTTGAATCCGATCAGAAGTTTGGTTTCA
TCGTCATGGATGGAAACGGTGCCCTGTTCGGTACCTTGAGCGGCAACACC
AGAGAAATCCTGCAAAAGTTGAGCGTTGATCTGCCCAAGAAGCACGGCCG
TGGTGGTCAGTCAGCATTGCGTTTCGCTCGTCTTCGTGAGGAGAAGCGCC
ACAACTACGTACGCAAGATTGCCGAGTTGGCTGTTCAGAACTACATCACC
AATGACAAGGTCAATGTTGCAGGATTGATCTTGGCCGGTTCTGCCGATTT
TAAAAACGACCTGAATCAGTCCGATATGTTCGACCAGAGATTGCAGGCTA
AGGTCATCAAGGTTGTCGACGTGTCTTATGGTGGCGAGAACGGCTTTAAC
CAGGCTATCGAACTGGCATCTGAGACCTTGAGCAACGTCAAATTTGTTCA
GGAGAAGAAGCTTATCGGAAAGTATTTCGAAGAAATCAGTCAGGATACTG
GAAAGGTCTGTTATGGCATTGACGATACATTGAAGGCTTTGGAGCTTGGT
GCGGCGGAGACACTGATCGTATATGAGAACCTTGACGTTACCCGGCACGT
TCTCAAGAGCTCCAGCGGTTCGGATGTCGTCATCCACACTACCAAGTCAC
AGGAAGAGAACCGTGAACTGTTCATGGACAAGGAGACTGGCGCTGAGATG
GAAGTGAGCGAGCAGCAGTCGTTCCTTGAGTGGCTTGCTGAAAGCTACAA
GGACTTTGGAGCAACCCTGGAGTTCGTCTCCGACAAGTCCAGTGAAGGAA
ATCAGTTTGTCAAAGGTTTCGGTGGTATCGGAGCCATCCTTCGGTACAAG
GTCAACTTTGAACAGCTTGCTGACTACGATGACGAGGATGAATTCTACGA
CGGTATGTTTAACTCAATGTCGGTGTTATTCGTCCCCCAAGGATCAGATT
TCTAGAGCAGCAAAGATGTTGGCGGAAGAGTTTATGAGCGCGGCTCAGCC
GAACGAAGCGGAGAAGAACATCGAGATATGGAAGGTGAAGAAACTCATTA
AGCGGCTTGAGGCCGCTAGAGGAAACGGAACCTCCATGATCTCTCTTATC
ATTCATTGACGGTTCAGCGGCCTCGCAGAGAGCGAGGATGAGGCACTGCG
TCTAACATCAAGTCTCGTGTCAACCGTCTTTCCGTCCTTTCCGCTATTAC
TTCGACGCAACAACGTCTCAAGCTCTACAATAAGGTGCCGCCGAATGGTC
TAGTGGTTTATTGCGGTGAAATTATCACCTCTGAAGGAAAGGAGCGCAAG
ATCAACATTGATTTCGAGCCTTTCAAGCCAATCAACACCTCGTTGTATCT
CTGTGATAACAAGTTCCACACTGAGGCTCTTAGTGAGCTTCTTGAATCCG
ATCAGAAGTTTGGTTTCATCGTCATGGATGGAAACGGTGCCCTGTTCGGT
ACCTTGAGCGGCAACACCAGAGAAATCCTGCAAAAGTTGAGCGTTGATCT
GCCCAAGAAGCACGGCCGTGGTGGTCAGTCAGCATTGCGTTTCGCTCGTC
TTCGTGAGGAGAAGCGCCACAACTACGTACGCAAGATTGCCGAGTTGGCT
GTTCAGAACTACATCACCAATGACAAGGTCAATGTTGCAGGATTGATCTT
GGCCGGTTCTGCCGATTTTAAAAACGACCTGAATCAGTCCGATATGTTCG
ACCAGAGATTGCAGGCTAAGGTCATCAAGGTTGTCGACGTGTCTTATGGT
GGCGAGAACGGCTTTAACCAGGCTATCGAACTGGCATCTGAGACCTTGAG
CAACGTCAAATTTGTTCAGGAGAAGAAGCTTATCGGAAAGTATTTCGAAG
AAATCAGTCAGGATACTGGAAAGGTCTGTTATGGCATTGACGATACATTG
AAGGCTTTGGAGCTTGGTGCGGCGGAGACACTGATCGTATATGAGAACCT
TGACGTTACCCGGCACGTTCTCAAGAGCTCCAGCGGTTCGGATGTCGTCA
TCCACACTACCAAGTCACAGGAAGAGAACCGTGAACTGTTCATGGACAAG
GAGACTGGCGCTGAGATGGAAGTGAGCGAGCAGCAGTCGTTCCTTGAGTG
GCTTGCTGAAAGCTACAAGGACTTTGGAGCAACCCTGGAGTTCGTCTCCG
ACAAGTCCAGTGAAGGAAATCAGTTTGTCAAAGGTTTCGGTGGTATCGGA
GCCATCCTTCGGTACAAGGTCAACTTTGAACAGCTTGCTGACTACGATGA
CGAGGATGAATTCTACGACGGTATGTTTAACTCAATGTCGGTGTTATTCG
TCCCCCAAGGATCAGATTTCTAGAGCAGCAAAGATGTTGGCGGAAGAGTT
TATGAGCGCGGCTCAGCCGAACGAAGCGGAGAAGAACATCGAGATATGGA
AGGTGAAGAAACTCATTAAGCGGCTTGAGGCCGCTAGAGGAAACGGAACC
TCCATGATCTCTCTTATCATTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SU2ASPNIDRAFT_54938Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54938-T1ASPNIDRAFT_54938-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54938-T1.cdsASPNIDRAFT_54938-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54938-T1.exon5ASPNIDRAFT_54938-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54938-T1.exon4ASPNIDRAFT_54938-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54938-T1.exon3ASPNIDRAFT_54938-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54938-T1.exon2ASPNIDRAFT_54938-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54938-T1.exon1ASPNIDRAFT_54938-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54938-T1.utr5p2ASPNIDRAFT_54938-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_54938-T1.utr5p1ASPNIDRAFT_54938-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262CDO
DBxrefInterPro:IPR042226
DBxrefInterPro:IPR005141
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR005142
DBxrefInterPro:IPR024049
DBxrefInterPro:IPR004403
DBxrefInterPro:IPR005140
DBxrefPFAM:PF03465
DBxrefPFAM:PF03464
DBxrefPFAM:PF03463
DBxrefPFAM:PF18854
DBxrefPFAM:PF18859
ProductEukaryotic peptide chain release factor subunit 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:872845..874545 -
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