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ASPNIDRAFT_55040-T1, ASPNIDRAFT_55040-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55040-T1
Unique NameASPNIDRAFT_55040-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:1226877..1227828-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55040-T1 ID=ASPNIDRAFT_55040-T1|Name=ASPNIDRAFT_55040-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=952bp|location=Sequence derived from alignment at ACJE01000016.1:1226877..1227828- (Aspergillus niger ATCC 1015)
AACTCTCCTCTCATCCCTCTAAACACCCCCGGGTCTATAGTAATAGTGCA
TCTTGCTCTGTTCCAATTATCGCTCACAATGGCTGCTTCCCTCGTCCGCA
CCTCTGCCCGTACGGCCCTGCGCGCCGGAGCTTCGGCTACTCCCAGAACT
GCCGGCATGGCGGGCTTGACCTTTGCCCGCGGCAAGGCTACTCTCCCTGA
CCTGTCCTGTATGCATCCAGCTGCCATTCTCGAGACGCATAGATCTTGAA
GTCACCGAACTGACTCCCTGTAGACGACTATGGCGCTCTCGAGCCCTCCA
TCTCCGGCAAGATCATGGAGCTTCACCACAAGAACCACCACCAGACCTAC
GTCAACAGCTACAACACTGCCATTGAGCAGCTCCAGGAGGCCCAGCACAA
GAACGACATTGCGGCCCAGATTGCCCTCAAGCCCCTGATCAACTTCCACG
GTGGTGGTCACCTGAACCACACCCTCTTCTGGGAGAACCTTGCTCCCAAG
AGCGCTGGCGGTGGTGAGCCCCCGTCCGGTGCCCTGTCGACTGCCATCAA
CGACACCTTCGGCAGCCTGGAGGAGTTCCAGAACAAGATGAACGCTGCTC
TTGCTGCTATCCAGGGTAGCGGCTGGGCCTGGCTCGTCAAGGACAAGCAG
ACCGGTCACATTGGCATCAAGGCCTACGCCGTAAGAATGCACCATGCATG
CGAAGAAAGTATTTGAGTTGGCTAACGATTTCACAGAACCAGGACCCCGT
TGTCGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCCT
ACTAGTAAGTGCACCTGACCCAACCCGTTGGAATCATCAGGAGCTAATAT
TGTCTATCTAGCCTCCAATACCAGAACCGCAAGGCCGAGTACTTCAAGGC
CATCTGGGAGGTCATCAACTGGAAGGCCGTGGAGAAGCGCTTCTCCGCCT
AA
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Coding sequence (CDS) from alignment at ACJE01000016.1:1226877..1227828-

>ASPNIDRAFT_55040-T1 ID=ASPNIDRAFT_55040-T1|Name=ASPNIDRAFT_55040-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2784bp|location=Sequence derived from alignment at ACJE01000016.1:1226877..1227828- (Aspergillus niger ATCC 1015)
CCTCCAATACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGG
TCATCAACTGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGAC
CCCGTTGTCGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCA
CGCCTACTAACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATC
ATGGAGCTTCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAA
CACTGCCATTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGG
CCCAGATTGCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTG
AACCACACCCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGG
TGAGCCCCCGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCA
GCCTGGAGGAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAG
GGTAGCGGCTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGG
CATCAAGGCCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTA
CGGCCCTGCGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCG
GGCTTGACCTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTC
CAATACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCAT
CAACTGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCG
TTGTCGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCC
TACTAACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGG
AGCTTCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACT
GCCATTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCA
GATTGCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACC
ACACCCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAG
CCCCCGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCT
GGAGGAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTA
GCGGCTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATC
AAGGCCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGC
CCTGCGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCT
TGACCTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTCCAAT
ACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCATCAAC
TGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCGTTGT
CGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCCTACT
AACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGGAGCT
TCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACTGCCA
TTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCAGATT
GCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACCACAC
CCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAGCCCC
CGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCTGGAG
GAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTAGCGG
CTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATCAAGG
CCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGCCCTG
CGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCTTGAC
CTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTCCAATACCA
GAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCATCAACTGGA
AGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCGTTGTCGGT
CAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCCTACTAACG
ACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGGAGCTTCAC
CACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACTGCCATTGA
GCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCAGATTGCCC
TCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACCACACCCTC
TTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAGCCCCCGTC
CGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCTGGAGGAGT
TCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTAGCGGCTGG
GCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATCAAGGCCTA
CGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGCCCTGCGCG
CCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCTTGACCTTT
GCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006801superoxide metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0004784superoxide dismutase activity
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55040ASPNIDRAFT_55040Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55040-T1ASPNIDRAFT_55040-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55040-T1.cdsASPNIDRAFT_55040-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55040-T1.exon4ASPNIDRAFT_55040-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55040-T1.exon3ASPNIDRAFT_55040-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55040-T1.exon2ASPNIDRAFT_55040-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55040-T1.exon1ASPNIDRAFT_55040-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55040-T1.utr5p1ASPNIDRAFT_55040-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019833
DBxrefInterPro:IPR019832
DBxrefInterPro:IPR019831
DBxrefInterPro:IPR036314
DBxrefInterPro:IPR036324
DBxrefInterPro:IPR001189
DBxrefPFAM:PF00081
DBxrefPFAM:PF02777
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:1226877..1227828 -
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