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ASPNIDRAFT_55082-T1, ASPNIDRAFT_55082-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55082-T1
Unique NameASPNIDRAFT_55082-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000014.1:205512..206483+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55082-T1 ID=ASPNIDRAFT_55082-T1|Name=ASPNIDRAFT_55082-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=972bp|location=Sequence derived from alignment at ACJE01000014.1:205512..206483+ (Aspergillus niger ATCC 1015)
GTTCTGCGCTCTTTATTCTGAACGTGCGCTCCCTGCTTCTGTTGACTCGC
TGAATCAGTTTTCTGGTCTTTCCCAGTCGTTGATATCTTGTCATCAAGTG
TTGGCGGCAAGTGCTCGTCCATTTGTCGCAAATCTAGTTCATCGCTTCAC
TCATTCATAGCGATTCGACTTACTCTGGACTAACGACACGGGCCACTCGA
AATATTCGAACCGCACGCATCCAATCCCCGGGAAACAGTAAGATACTGGC
TGAAGCTTGATCAATCGCGTGAATCGCACACCCCCCGCGCACCGGCTGTT
GAAACGAAATTTTGTATCATACTATCGACGATCGCAAGTGTACGACATGT
TTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGTCCTACTTC
GGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAACGAGGAGGAGGA
AGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGACATGGTTG
ATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAGAATATACT
ATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAGACCGTACG
TCTTGGAGTTGCATTGAACAGGGCTGCATTTGATTCTGACCATAGCCTTG
TAGGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTT
GGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAGTATGTCAACGACCGA
GTTTGAGTTGGATCACTTAGCCTTATCGGTTGCTAACGAGTTGGCAAGAA
CATTCCTTCCGACATCAAGTGGGAACCAAACACAGTACCGCCGCAATACA
CGGACCATGCGGACCAAGTCATCGAGAAGGGGACCAGTTTACGGCTTAAG
ATTCTTGGTGTGAAGCCCGACGTTGCGGCGATCAATGCCATTGGAACGAT
CAAGGAAGATTATCTCGGGTGA
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Coding sequence (CDS) from alignment at ACJE01000014.1:205512..206483+

>ASPNIDRAFT_55082-T1 ID=ASPNIDRAFT_55082-T1|Name=ASPNIDRAFT_55082-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1512bp|location=Sequence derived from alignment at ACJE01000014.1:205512..206483+ (Aspergillus niger ATCC 1015)
ATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGTCCTA
CTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAACGAGGAGG
AGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGACATG
GTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAGAATA
TACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAGACCG
TCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTTGGCC
GGTCCATTGTCTGTTTTTATTGCACGGAAAAACATTCCTTCCGACATCAA
GTGGGAACCAAACACAGTACCGCCGCAATACACGGACCATGCGGACCAAG
TCATCGAGAAGGGGACCAGTTTACGGCTTAAGATTCTTGGTGTGAAGCCC
GACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAGATTATCTCGG
GTGAATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGT
CCTACTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAACGAG
GAGGAGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGA
CATGGTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAG
AATATACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAG
ACCGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTT
GGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAAACATTCCTTCCGACA
TCAAGTGGGAACCAAACACAGTACCGCCGCAATACACGGACCATGCGGAC
CAAGTCATCGAGAAGGGGACCAGTTTACGGCTTAAGATTCTTGGTGTGAA
GCCCGACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAGATTATC
TCGGGTGAATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCAC
CCGTCCTACTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAA
CGAGGAGGAGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGA
TGGACATGGTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAG
GCAGAATATACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGG
AGAGACCGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTA
CTTTGGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAAACATTCCTTCC
GACATCAAGTGGGAACCAAACACAGTACCGCCGCAATACACGGACCATGC
GGACCAAGTCATCGAGAAGGGGACCAGTTTACGGCTTAAGATTCTTGGTG
TGAAGCCCGACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAGAT
TATCTCGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55082ASPNIDRAFT_55082Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55082-T1.utr5p1ASPNIDRAFT_55082-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55082-T1.exon1ASPNIDRAFT_55082-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55082-T1.exon2ASPNIDRAFT_55082-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55082-T1.exon3ASPNIDRAFT_55082-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55082-T1.cdsASPNIDRAFT_55082-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55082-T1ASPNIDRAFT_55082-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264RW6
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR036898
DBxrefInterPro:IPR003029
DBxrefInterPro:IPR005576
DBxrefPFAM:PF03876
DBxrefPFAM:PF00575
ProductDNA-directed RNA polymerase II
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000014.1supercontigACJE01000014.1:205512..206483 +
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