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ASPNIDRAFT_55136-T1, ASPNIDRAFT_55136-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55136-T1
Unique NameASPNIDRAFT_55136-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:240513..241736+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55136-T1 ID=ASPNIDRAFT_55136-T1|Name=ASPNIDRAFT_55136-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1224bp|location=Sequence derived from alignment at ACJE01000015.1:240513..241736+ (Aspergillus niger ATCC 1015)
CCACGATCCCAACCATTGATCTCTTTTGTTTGTTCCTCAGCGGATAAAGT
CATACGAAAATGAAATTCCTCAAAGCCAAGGGTAGCTTGCTGTCGTCTGG
CATATACCTCATTGCATTGGCCCCCTTTGTCAACGCAAAATGCGCTCTTC
CGTCGACATATAGTTGGACTTCGACCGATGCTCTCGCCACCCCAAAGTCC
GGATGGACTGCACTCAAGGACTTCACCGATGTCGTCTCTAACGGCAAACA
TATTGTCTATGCGTCCACTACCGACACACAGGGAAATTACGGCTCCATGG
GCTTTGGCGCCTTTTCGGACTGGTCGGACATGGCATCCGCTAGTCAAACG
GCCACAAGCTTCAGCGCCGTAGCTCCAACCTTGTTCTACTTCCAGCCAAA
GAGTATCTGGGTTCTGGCCTACCAATGGGGCTCCAGCACTTTCACCTACC
GCACCTCTCAAGATCCCACCAATGTCAACGGCTGGTCATCCGAGCAAGCT
CTTTTCACGGGCAAAATCAGCGGCTCAAGTACCGGTGCCATTGATCAGAC
TGTGATTGGTGATGATACGAATATGTATCTTTTCTTTGCCGGCGACAATG
GCAAGATCTACCGATCCAGCATGTCTATCAATGACTTCCCCGGAAGCTTC
GGCAGCCAGTACGAGGAGATCCTCAGCGGCGCGACCAACGATTTGTTCGA
GGCGGTCCAAGTGTACACCGTCGACGGCGGCGAGGGTGACAGCAAGTACC
TCATGATCGTCGAGGCGATCGGTTCCACCGGACATCGTTATTTCCGCTCC
TTCACGGCCAGCAGTCTCGGCGGAGAGTGGACAGCCCAGGCGGCAAGTGA
AGATCAACCCTTCGCGGGCAAAGCCAACAGTGGCGCCACCTGGACCGACG
ACATCAGTCATGGTGACTTGGTTCGCAACAACCCTGATCAAACCATGACG
GTCGATCCTTGCAACCTCCAGCTTCTCTACCAGGGCCATGACCCCAACAG
CAATAGTGACTACAACCTCTTGCCCTGGAAGCCAGGAGTTCTTACCTTGA
AGCAGTGAAAGGCTTATCATTTGGTTGCAGACCGGGGTTTTCTTCCCCTT
CCTTGAGTAGTATTGTTGGTGGAAGACAGCGGGATGGGGAGTGAATACTA
TCTTGGGCTCAATTGAGGTGGAATCCTGTCAGACTGTGTACATAGGCTAC
ATGCGAATGATTTGGTTTATTCAC
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Coding sequence (CDS) from alignment at ACJE01000015.1:240513..241736+

>ASPNIDRAFT_55136-T1 ID=ASPNIDRAFT_55136-T1|Name=ASPNIDRAFT_55136-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=999bp|location=Sequence derived from alignment at ACJE01000015.1:240513..241736+ (Aspergillus niger ATCC 1015)
ATGAAATTCCTCAAAGCCAAGGGTAGCTTGCTGTCGTCTGGCATATACCT
CATTGCATTGGCCCCCTTTGTCAACGCAAAATGCGCTCTTCCGTCGACAT
ATAGTTGGACTTCGACCGATGCTCTCGCCACCCCAAAGTCCGGATGGACT
GCACTCAAGGACTTCACCGATGTCGTCTCTAACGGCAAACATATTGTCTA
TGCGTCCACTACCGACACACAGGGAAATTACGGCTCCATGGGCTTTGGCG
CCTTTTCGGACTGGTCGGACATGGCATCCGCTAGTCAAACGGCCACAAGC
TTCAGCGCCGTAGCTCCAACCTTGTTCTACTTCCAGCCAAAGAGTATCTG
GGTTCTGGCCTACCAATGGGGCTCCAGCACTTTCACCTACCGCACCTCTC
AAGATCCCACCAATGTCAACGGCTGGTCATCCGAGCAAGCTCTTTTCACG
GGCAAAATCAGCGGCTCAAGTACCGGTGCCATTGATCAGACTGTGATTGG
TGATGATACGAATATGTATCTTTTCTTTGCCGGCGACAATGGCAAGATCT
ACCGATCCAGCATGTCTATCAATGACTTCCCCGGAAGCTTCGGCAGCCAG
TACGAGGAGATCCTCAGCGGCGCGACCAACGATTTGTTCGAGGCGGTCCA
AGTGTACACCGTCGACGGCGGCGAGGGTGACAGCAAGTACCTCATGATCG
TCGAGGCGATCGGTTCCACCGGACATCGTTATTTCCGCTCCTTCACGGCC
AGCAGTCTCGGCGGAGAGTGGACAGCCCAGGCGGCAAGTGAAGATCAACC
CTTCGCGGGCAAAGCCAACAGTGGCGCCACCTGGACCGACGACATCAGTC
ATGGTGACTTGGTTCGCAACAACCCTGATCAAACCATGACGGTCGATCCT
TGCAACCTCCAGCTTCTCTACCAGGGCCATGACCCCAACAGCAATAGTGA
CTACAACCTCTTGCCCTGGAAGCCAGGAGTTCTTACCTTGAAGCAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0046373L-arabinose metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046556alpha-L-arabinofuranosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55136ASPNIDRAFT_55136Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55136-T1.utr5p1ASPNIDRAFT_55136-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55136-T1.exon1ASPNIDRAFT_55136-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55136-T1.cdsASPNIDRAFT_55136-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55136-T1.utr3p1ASPNIDRAFT_55136-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55136-T1ASPNIDRAFT_55136-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:GH62
DBxrefInterPro:IPR005193
DBxrefInterPro:IPR023296
DBxrefPFAM:PF03664
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:240513..241736 +
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