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ASPNIDRAFT_55240-T1, ASPNIDRAFT_55240-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55240-T1
Unique NameASPNIDRAFT_55240-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3417513..3418466+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55240-T1 ID=ASPNIDRAFT_55240-T1|Name=ASPNIDRAFT_55240-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=954bp|location=Sequence derived from alignment at ACJE01000004.1:3417513..3418466+ (Aspergillus niger ATCC 1015)
CTCTTTTTTCCTTTTTCCCCCGTGAAAAAGCTACTGTATATACTAGCCGC
AAAAATGGGAGGCAAGAAAGCCGCCGGCGAGAACTCCAAGAAGGCTGCGG
GTAATGCTCGTGTGCGTACCACCTCTATACTGATCTATCTTCTCTCTGCA
AAATATTACCCCGCCCCCGCTCCATCACCACCAGAACCATATTCTCAACC
ACAACTACAGGAGTATAGGCAAAAGCTGACCAGATCCTCTATATGGGTGT
AGAAAGCCGAAGCAGCCGCCAACAAAAAGGCCGCCGAGGACGCCAAGCGC
GCCGCCGAGGAGGACGCTAAGTGGTCCAAGGGCGCGAAGGGTGGTAGCAA
GCGGTATGCAGACCCAAGTTATCAACATATCCCCTCCAAAACCAAAAAAG
CACCCACTAACATAGTCTTTTTTGATAAAAACAACAGCGACGACGCCGAA
GCCAAAAAAGCCGAAGCCGCGCGCAAGAAGGCCGAACGCGACGCCCTCCT
CGCCGCCGAAGAAGCCTCCCAGCCCAGCAAACCCAAGAACAACAAAGCCG
CAGCGAAGAAGAACGCGGGACCCAGCCGAGGCACATTGGATTTGTCGCAG
CTCGACGATACACCAGGGAGCAAGAAGGCTTCTGCGCTCAATGCCTCCGG
TATCGACAATGCGCTCGATGCACTGTCACTTACGGGCAAGGATAGCGGCA
AGATCGATCGGCATCCCGAGAGACGGTTCAAGGCGGCGTATGCGGCATTT
GAGGAGAGACGGTTACCTGAGATTGAGGCTGAGAATCCTGGACTGAGACG
TAACCAGCGCATTGAGATCTGTAAGAAGGAGTTTGAGAAGAGTGAGGAGA
ATCCGTTCAACCAGGCGCATGTGGCATTTGATGCTAGTCGGGAGGAGATT
GCGGCTGTGAAGGAGGCGGAGAGGAAGAAGGTTGAGGCGAGGTTGGCGAA
ATAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:3417513..3418466+

>ASPNIDRAFT_55240-T1 ID=ASPNIDRAFT_55240-T1|Name=ASPNIDRAFT_55240-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2025bp|location=Sequence derived from alignment at ACJE01000004.1:3417513..3418466+ (Aspergillus niger ATCC 1015)
ATGGGAGGCAAGAAAGCCGCCGGCGAGAACTCCAAGAAGGCTGCGGGTAA
TGCTCGTAAAGCCGAAGCAGCCGCCAACAAAAAGGCCGCCGAGGACGCCA
AGCGCGCCGCCGAGGAGGACGCTAAGTGGTCCAAGGGCGCGAAGGGTGGT
AGCAAGCGCGACGACGCCGAAGCCAAAAAAGCCGAAGCCGCGCGCAAGAA
GGCCGAACGCGACGCCCTCCTCGCCGCCGAAGAAGCCTCCCAGCCCAGCA
AACCCAAGAACAACAAAGCCGCAGCGAAGAAGAACGCGGGACCCAGCCGA
GGCACATTGGATTTGTCGCAGCTCGACGATACACCAGGGAGCAAGAAGGC
TTCTGCGCTCAATGCCTCCGGTATCGACAATGCGCTCGATGCACTGTCAC
TTACGGGCAAGGATAGCGGCAAGATCGATCGGCATCCCGAGAGACGGTTC
AAGGCGGCGTATGCGGCATTTGAGGAGAGACGGTTACCTGAGATTGAGGC
TGAGAATCCTGGACTGAGACGTAACCAGCGCATTGAGATCTGTAAGAAGG
AGTTTGAGAAGAGTGAGGAGAATCCGTTCAACCAGGCGCATGTGGCATTT
GATGCTAGTCGGGAGGAGATTGCGGCTGTGAAGGAGGCGGAGAGGAAGAA
GGTTGAGGCGAGGTTGGCGAAATAGATGGGAGGCAAGAAAGCCGCCGGCG
AGAACTCCAAGAAGGCTGCGGGTAATGCTCGTAAAGCCGAAGCAGCCGCC
AACAAAAAGGCCGCCGAGGACGCCAAGCGCGCCGCCGAGGAGGACGCTAA
GTGGTCCAAGGGCGCGAAGGGTGGTAGCAAGCGCGACGACGCCGAAGCCA
AAAAAGCCGAAGCCGCGCGCAAGAAGGCCGAACGCGACGCCCTCCTCGCC
GCCGAAGAAGCCTCCCAGCCCAGCAAACCCAAGAACAACAAAGCCGCAGC
GAAGAAGAACGCGGGACCCAGCCGAGGCACATTGGATTTGTCGCAGCTCG
ACGATACACCAGGGAGCAAGAAGGCTTCTGCGCTCAATGCCTCCGGTATC
GACAATGCGCTCGATGCACTGTCACTTACGGGCAAGGATAGCGGCAAGAT
CGATCGGCATCCCGAGAGACGGTTCAAGGCGGCGTATGCGGCATTTGAGG
AGAGACGGTTACCTGAGATTGAGGCTGAGAATCCTGGACTGAGACGTAAC
CAGCGCATTGAGATCTGTAAGAAGGAGTTTGAGAAGAGTGAGGAGAATCC
GTTCAACCAGGCGCATGTGGCATTTGATGCTAGTCGGGAGGAGATTGCGG
CTGTGAAGGAGGCGGAGAGGAAGAAGGTTGAGGCGAGGTTGGCGAAATAG
ATGGGAGGCAAGAAAGCCGCCGGCGAGAACTCCAAGAAGGCTGCGGGTAA
TGCTCGTAAAGCCGAAGCAGCCGCCAACAAAAAGGCCGCCGAGGACGCCA
AGCGCGCCGCCGAGGAGGACGCTAAGTGGTCCAAGGGCGCGAAGGGTGGT
AGCAAGCGCGACGACGCCGAAGCCAAAAAAGCCGAAGCCGCGCGCAAGAA
GGCCGAACGCGACGCCCTCCTCGCCGCCGAAGAAGCCTCCCAGCCCAGCA
AACCCAAGAACAACAAAGCCGCAGCGAAGAAGAACGCGGGACCCAGCCGA
GGCACATTGGATTTGTCGCAGCTCGACGATACACCAGGGAGCAAGAAGGC
TTCTGCGCTCAATGCCTCCGGTATCGACAATGCGCTCGATGCACTGTCAC
TTACGGGCAAGGATAGCGGCAAGATCGATCGGCATCCCGAGAGACGGTTC
AAGGCGGCGTATGCGGCATTTGAGGAGAGACGGTTACCTGAGATTGAGGC
TGAGAATCCTGGACTGAGACGTAACCAGCGCATTGAGATCTGTAAGAAGG
AGTTTGAGAAGAGTGAGGAGAATCCGTTCAACCAGGCGCATGTGGCATTT
GATGCTAGTCGGGAGGAGATTGCGGCTGTGAAGGAGGCGGAGAGGAAGAA
GGTTGAGGCGAGGTTGGCGAAATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55240ASPNIDRAFT_55240Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55240-T1.utr5p1ASPNIDRAFT_55240-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55240-T1.exon1ASPNIDRAFT_55240-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55240-T1.exon2ASPNIDRAFT_55240-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55240-T1.exon3ASPNIDRAFT_55240-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55240-T1.cdsASPNIDRAFT_55240-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55240-T1ASPNIDRAFT_55240-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010422
DBxrefPFAM:PF06244
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3417513..3418466 +
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