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ASPNIDRAFT_55356-T1, ASPNIDRAFT_55356-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55356-T1
Unique NameASPNIDRAFT_55356-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2091883..2094487-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55356-T1 ID=ASPNIDRAFT_55356-T1|Name=ASPNIDRAFT_55356-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2605bp|location=Sequence derived from alignment at ACJE01000004.1:2091883..2094487- (Aspergillus niger ATCC 1015)
CCCGCCGTATCGTTCGACTCTCGATCGCTCTCCCGATCTCCACCTCCCCA
GGACTGCATCTCGAAACCGTGAGCAACCAGCATTGGCGAAATTGCTGCGG
TTGTGATTCCAGCGTATCCTTAGATTGGGGTGGTTCCGCTTCAGGACCCC
ATGTTGAAGAGAAGGAGAGAACGCATCCGATCCCCGACTCCTCTCTCTCC
TGCCACCGCCGCCTCCCCGAGCCCAACCCTGCCAGCCTCAACCTACCCTA
GGAACATTCAACCAATCGACCTACGGTCTCGTCTGCCACGTTAAATGGCA
GATGGTACCTACAGGTTCCAGCAGCCTGGGGCCGGGCAGTTCTTCTTCCA
AACACAAACGCAACAGCACTCTCACCAACGTCATCTCGTACGCAACGGGA
CCAACTCCCCCACTGGAAGACTAAAATTTAGTCACGACACTCCTTCTCCC
TCACGCTCACCTCCGATCAGCCAAGCTGCTGCCTTGAATCCCTTCACAAT
GTACACACAAACCCACCAAGGGCAGCATGTCATGATGAATGGCGGCCAGG
CCCACCAGCGATTTGGCATGCAGATCCCCAAGTTCCAATCGCAGAGCCAT
CACCCCCACCCCGCACAGCAGGCCCATCACCATGCCCATCACAACCAAGC
CTCTCATAGCATCAATCACCAGCACAACTTCTCCAGTGGGGCATTGGCTG
CCGCCACTCCGCACTTCACTCCCGGCCCCCTCCAAAATGGCGCTCATGTT
AATGTGGACGAAGATATTGACGAGACCATGAACGAACATTGGCAGCAGCA
ACTCCAGTTGGCTGCAGAGTCACGGCAGGCGAGCTCCCCGCATTATTACG
CCCGTACCGTCGCACAGCAAACCAAGGGCATCCAGATTGCGCCCAGCCAG
CCTGAGTCACAAGAGAACGGGAGCGGCGATCGCAATGGCCTGGTGAAGTC
CAAGCCTGCTCCTCGGCAAGGTTGGCATGCTCTTGATTTCGGCGGACAGG
GTCTCCGCGCGCTTGCGACATCTTTGTTCCACTATACCTTCCTAGAGAAA
TTGTACCTCAACCACAACAAGTTGAAGACGCTTCCTCCGGCAATTGGTCA
ACTGCGGAAGCTCACCCACTTGGATTTGTCGAGCAATGATATTTCGGAGC
TCCCTGAAGAGATCGGTATGCTCACAAGCTTGAAGCAGCTGCTTCTCTTC
GATAACAACATTCGCACGCTTCCGTTCGAAATGGGTTATCTGTATAGATT
AGAGATGCTGGGAATCGAAGGGAATCCTTTGAACGATGTTCTGAAGTCTC
AGATCATTAAGGAAGGAACCAAGGCCCTAGTCCGGTATTTGAGGGAAGAA
ATGCCAGGTTTGTGCTCACGACTTAAAGCTCTCACCATGCACTTCAGACT
AACTTTGTCTCCAAAAAGTTCATCTTCCTCCCCCGGATAGAGATTGGATC
ATCCTGGACGAGACCGCTAGCTCCTCCAACAGTCCCACCGAGAAGATTAC
CGTCCTTTCCCACAATGCCCTCTGCGACTCTTCCGCAACCCCGAGTCACT
TCGGTTATACCCCGTCCCGTGTTCTTTCTTGGGAGTTCAGACGCGAGCTT
ATCCTGAGCGAGCTGAGGTCGCACGACTCGGACATTATATGTCTCCAGGA
GATCGACCAAGGCAGTTACAATGGATTCTTCCGGGAGCAGCTGGCTTATA
ACGATTACAAGGGTGTATACTGGCCCAGAGGCAGAGCCATGGGTATGCAG
GAGGAGGAAGCGAAGTCGGTCGATGGCTGTGCCACCTTCTTCAAGGGAAG
CAAGTTCATCCTCCTCGATAAGCAGATGATCAACTTCGGTCAAACAGCAG
TGCGGCGACCGGATGCCAAGGGTCAAGATGACATCTACAACAGACTCTGG
CAGAAGGATCATATTGCGGTGGTTATCTTCCTGGAGAACAGGCTGACAGG
CTCCCGCTTTATCGTCGTGAACGCGCATCTCTACTGGGATCCCGCTTTCA
AGGACGTGAAGTTGATTCAGACCGCCATTTTGATGGAGGAAATCACCAAA
CTCTCCGAGAAGTACGCGAAATTCCCGCCATGTACCGACAAGACTGCCTT
CCGCTTCTCGGAAGCAGAAGGTGAGTCGGACACTCCTCCACCTGAACCTG
CGCCATCTGTGGAGTATGCCAGTGGTGATCAGATCCCGCTTTTCATGTGC
GGAGACTTCAACTCGGCGCCTGGGTCGGCAGCGTACAACCTGGTCGCACA
CGGCCGGCTCACGGAGTCCCATCCGGACTTGGAGAAGAGGCTCTACGGCA
ACCTTAGTCGGGTCGGTATGACGCACCCGTTCAAGCTGAAGTCGGCATAC
AACTCGATTGGCGAGCTGAGCTTCACGAACTACACTCCGGACTTCAAAGA
TATTCTTGACTATATTTGGTATACTTCCAACACACTTCATGTCTCGGCGT
TACTTGGGGAGGTGGACAAGGAGTATCTGCAGAAGGTGCCCGGGTTCCCC
AATTTTCATTTTCCAAGTGATCATGTCGCATTATTTGCGGAGTTTACAGT
TAAAGGGAAAAAGGGAAAGGTTGTGGAAGCGGATTTTGGGCCGCAACGGA
ATTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:2091883..2094487-

>ASPNIDRAFT_55356-T1 ID=ASPNIDRAFT_55356-T1|Name=ASPNIDRAFT_55356-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4572bp|location=Sequence derived from alignment at ACJE01000004.1:2091883..2094487- (Aspergillus niger ATCC 1015)
ATTGGATCATCCTGGACGAGACCGCTAGCTCCTCCAACAGTCCCACCGAG
AAGATTACCGTCCTTTCCCACAATGCCCTCTGCGACTCTTCCGCAACCCC
GAGTCACTTCGGTTATACCCCGTCCCGTGTTCTTTCTTGGGAGTTCAGAC
GCGAGCTTATCCTGAGCGAGCTGAGGTCGCACGACTCGGACATTATATGT
CTCCAGGAGATCGACCAAGGCAGTTACAATGGATTCTTCCGGGAGCAGCT
GGCTTATAACGATTACAAGGGTGTATACTGGCCCAGAGGCAGAGCCATGG
GTATGCAGGAGGAGGAAGCGAAGTCGGTCGATGGCTGTGCCACCTTCTTC
AAGGGAAGCAAGTTCATCCTCCTCGATAAGCAGATGATCAACTTCGGTCA
AACAGCAGTGCGGCGACCGGATGCCAAGGGTCAAGATGACATCTACAACA
GACTCTGGCAGAAGGATCATATTGCGGTGGTTATCTTCCTGGAGAACAGG
CTGACAGGCTCCCGCTTTATCGTCGTGAACGCGCATCTCTACTGGGATCC
CGCTTTCAAGGACGTGAAGTTGATTCAGACCGCCATTTTGATGGAGGAAA
TCACCAAACTCTCCGAGAAGTACGCGAAATTCCCGCCATGTACCGACAAG
ACTGCCTTCCGCTTCTCGGAAGCAGAAGGTGAGTCGGACACTCCTCCACC
TGAACCTGCGCCATCTGTGGAGTATGCCAGTGGTGATCAGATCCCGCTTT
TCATGTGCGGAGACTTCAACTCGGCGCCTGGGTCGGCAGCGTACAACCTG
GTCGCACACGGCCGGCTCACGGAGTCCCATCCGGACTTGGAGAAGAGGCT
CTACGGCAACCTTAGTCGGGTCGGTATGACGCACCCGTTCAAGCTGAAGT
CGGCATACAACTCGATTGGCGAGCTGAGCTTCACGAACTACACTCCGGAC
TTCAAAGATATTCTTGACTATATTTGGTATACTTCCAACACACTTCATGT
CTCGGCGTTACTTGGGGAGGTGGACAAGGAGTATCTGCAGAAGGTGCCCG
GGTTCCCCAATTTTCATTTTCCAAGTGATCATGTCGCATTATTTGCGGAG
TTTACAGTTAAAGGGAAAAAGGGAAAGGTTGTGGAAGCGGATTTTGGGCC
GCAACGGAATTGAATGGCAGATGGTACCTACAGGTTCCAGCAGCCTGGGG
CCGGGCAGTTCTTCTTCCAAACACAAACGCAACAGCACTCTCACCAACGT
CATCTCGTACGCAACGGGACCAACTCCCCCACTGGAAGACTAAAATTTAG
TCACGACACTCCTTCTCCCTCACGCTCACCTCCGATCAGCCAAGCTGCTG
CCTTGAATCCCTTCACAATGTACACACAAACCCACCAAGGGCAGCATGTC
ATGATGAATGGCGGCCAGGCCCACCAGCGATTTGGCATGCAGATCCCCAA
GTTCCAATCGCAGAGCCATCACCCCCACCCCGCACAGCAGGCCCATCACC
ATGCCCATCACAACCAAGCCTCTCATAGCATCAATCACCAGCACAACTTC
TCCAGTGGGGCATTGGCTGCCGCCACTCCGCACTTCACTCCCGGCCCCCT
CCAAAATGGCGCTCATGTTAATGTGGACGAAGATATTGACGAGACCATGA
ACGAACATTGGCAGCAGCAACTCCAGTTGGCTGCAGAGTCACGGCAGGCG
AGCTCCCCGCATTATTACGCCCGTACCGTCGCACAGCAAACCAAGGGCAT
CCAGATTGCGCCCAGCCAGCCTGAGTCACAAGAGAACGGGAGCGGCGATC
GCAATGGCCTGGTGAAGTCCAAGCCTGCTCCTCGGCAAGGTTGGCATGCT
CTTGATTTCGGCGGACAGGGTCTCCGCGCGCTTGCGACATCTTTGTTCCA
CTATACCTTCCTAGAGAAATTGTACCTCAACCACAACAAGTTGAAGACGC
TTCCTCCGGCAATTGGTCAACTGCGGAAGCTCACCCACTTGGATTTGTCG
AGCAATGATATTTCGGAGCTCCCTGAAGAGATCGGTATGCTCACAAGCTT
GAAGCAGCTGCTTCTCTTCGATAACAACATTCGCACGCTTCCGTTCGAAA
TGGGTTATCTGTATAGATTAGAGATGCTGGGAATCGAAGGGAATCCTTTG
AACGATGTTCTGAAGTCTCAGATCATTAAGGAAGGAACCAAGGCCCTAGT
CCGGTATTTGAGGGAAGAAATGCCAGGTTTGTGCTCACGACTTAAAGCTC
TCACCATGCACTTCAGACTAACTTTGTCTCCAAAAAATTGGATCATCCTG
GACGAGACCGCTAGCTCCTCCAACAGTCCCACCGAGAAGATTACCGTCCT
TTCCCACAATGCCCTCTGCGACTCTTCCGCAACCCCGAGTCACTTCGGTT
ATACCCCGTCCCGTGTTCTTTCTTGGGAGTTCAGACGCGAGCTTATCCTG
AGCGAGCTGAGGTCGCACGACTCGGACATTATATGTCTCCAGGAGATCGA
CCAAGGCAGTTACAATGGATTCTTCCGGGAGCAGCTGGCTTATAACGATT
ACAAGGGTGTATACTGGCCCAGAGGCAGAGCCATGGGTATGCAGGAGGAG
GAAGCGAAGTCGGTCGATGGCTGTGCCACCTTCTTCAAGGGAAGCAAGTT
CATCCTCCTCGATAAGCAGATGATCAACTTCGGTCAAACAGCAGTGCGGC
GACCGGATGCCAAGGGTCAAGATGACATCTACAACAGACTCTGGCAGAAG
GATCATATTGCGGTGGTTATCTTCCTGGAGAACAGGCTGACAGGCTCCCG
CTTTATCGTCGTGAACGCGCATCTCTACTGGGATCCCGCTTTCAAGGACG
TGAAGTTGATTCAGACCGCCATTTTGATGGAGGAAATCACCAAACTCTCC
GAGAAGTACGCGAAATTCCCGCCATGTACCGACAAGACTGCCTTCCGCTT
CTCGGAAGCAGAAGGTGAGTCGGACACTCCTCCACCTGAACCTGCGCCAT
CTGTGGAGTATGCCAGTGGTGATCAGATCCCGCTTTTCATGTGCGGAGAC
TTCAACTCGGCGCCTGGGTCGGCAGCGTACAACCTGGTCGCACACGGCCG
GCTCACGGAGTCCCATCCGGACTTGGAGAAGAGGCTCTACGGCAACCTTA
GTCGGGTCGGTATGACGCACCCGTTCAAGCTGAAGTCGGCATACAACTCG
ATTGGCGAGCTGAGCTTCACGAACTACACTCCGGACTTCAAAGATATTCT
TGACTATATTTGGTATACTTCCAACACACTTCATGTCTCGGCGTTACTTG
GGGAGGTGGACAAGGAGTATCTGCAGAAGGTGCCCGGGTTCCCCAATTTT
CATTTTCCAAGTGATCATGTCGCATTATTTGCGGAGTTTACAGTTAAAGG
GAAAAAGGGAAAGGTTGTGGAAGCGGATTTTGGGCCGCAACGGAATTGAA
TGGCAGATGGTACCTACAGGTTCCAGCAGCCTGGGGCCGGGCAGTTCTTC
TTCCAAACACAAACGCAACAGCACTCTCACCAACGTCATCTCGTACGCAA
CGGGACCAACTCCCCCACTGGAAGACTAAAATTTAGTCACGACACTCCTT
CTCCCTCACGCTCACCTCCGATCAGCCAAGCTGCTGCCTTGAATCCCTTC
ACAATGTACACACAAACCCACCAAGGGCAGCATGTCATGATGAATGGCGG
CCAGGCCCACCAGCGATTTGGCATGCAGATCCCCAAGTTCCAATCGCAGA
GCCATCACCCCCACCCCGCACAGCAGGCCCATCACCATGCCCATCACAAC
CAAGCCTCTCATAGCATCAATCACCAGCACAACTTCTCCAGTGGGGCATT
GGCTGCCGCCACTCCGCACTTCACTCCCGGCCCCCTCCAAAATGGCGCTC
ATGTTAATGTGGACGAAGATATTGACGAGACCATGAACGAACATTGGCAG
CAGCAACTCCAGTTGGCTGCAGAGTCACGGCAGGCGAGCTCCCCGCATTA
TTACGCCCGTACCGTCGCACAGCAAACCAAGGGCATCCAGATTGCGCCCA
GCCAGCCTGAGTCACAAGAGAACGGGAGCGGCGATCGCAATGGCCTGGTG
AAGTCCAAGCCTGCTCCTCGGCAAGGTTGGCATGCTCTTGATTTCGGCGG
ACAGGGTCTCCGCGCGCTTGCGACATCTTTGTTCCACTATACCTTCCTAG
AGAAATTGTACCTCAACCACAACAAGTTGAAGACGCTTCCTCCGGCAATT
GGTCAACTGCGGAAGCTCACCCACTTGGATTTGTCGAGCAATGATATTTC
GGAGCTCCCTGAAGAGATCGGTATGCTCACAAGCTTGAAGCAGCTGCTTC
TCTTCGATAACAACATTCGCACGCTTCCGTTCGAAATGGGTTATCTGTAT
AGATTAGAGATGCTGGGAATCGAAGGGAATCCTTTGAACGATGTTCTGAA
GTCTCAGATCATTAAGGAAGGAACCAAGGCCCTAGTCCGGTATTTGAGGG
AAGAAATGCCAGGTTTGTGCTCACGACTTAAAGCTCTCACCATGCACTTC
AGACTAACTTTGTCTCCAAAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CCR4ASPNIDRAFT_55356Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55356-T1ASPNIDRAFT_55356-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55356-T1.cdsASPNIDRAFT_55356-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55356-T1.exon2ASPNIDRAFT_55356-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55356-T1.exon1ASPNIDRAFT_55356-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55356-T1.utr5p1ASPNIDRAFT_55356-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09260WGT
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR005135
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR036691
DBxrefInterPro:IPR003591
DBxrefPFAM:PF13855
DBxrefPFAM:PF12799
DBxrefPFAM:PF03372
ProductGlucose-repressible alcohol dehydrogenase transcriptional effector
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2091883..2094487 -
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