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ASPNIDRAFT_55540-T1, ASPNIDRAFT_55540-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55540-T1
Unique NameASPNIDRAFT_55540-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:880331..881580-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55540-T1 ID=ASPNIDRAFT_55540-T1|Name=ASPNIDRAFT_55540-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1250bp|location=Sequence derived from alignment at ACJE01000010.1:880331..881580- (Aspergillus niger ATCC 1015)
ATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGA
CAAGTGGAAGGTACGCTATATAACCCAAATCCAAAACATCGAAACACTCG
AACCCGACCGAAACTAACCTGCAAATTTGTTGCGACCAGGTCGAACCCTT
CCAAGCCGAAGACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCG
CCACTCTTTTCCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCC
GTGGTGACAAGAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTT
GGTCGAGGGTAGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTG
CTGCGATTCTCAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTG
CCGGTGCAACAGGTAAATAACCCTGAATTTATGATTTCTAGGTTACCGAT
AAAGTTACTAACACATTAAAACTAAATAGGCCCTCAAAATCCTCGAAGAC
GACGTCGCATGCGACATCATCAAGATCCGCAACCAAGTCCGCAACAAGGA
GCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCGGTGGATCCACCC
TGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTGGTCCAGGGTAAC
ACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGAAGTCCGTCGCAT
CATCAACGACTGCATGGCCAACATCCACCCGATCTACCACATTAAGGAAC
TCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTGGCGAACGAATCC
TGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCTGTCCAAGCGTCG
CGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGTACACTCCTTTCC
CGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATCGAGTCGGGCGAG
TACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAAGGAGGAGGTCAT
GGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGGAGCGCGAGAAGG
CGTTCGTGCCGCCCGAGGAGCTGGACGCAGAGGAGAAGAAGAAGGAAAAG
AAGGAGAAGAAGGAGAAGAAAGAGAAGAAGAAGCGGAAGCGCGATTCCGA
GGCCGCGGATGTAGATGGCGACGATGGTGCCGAGAAGAAGGAAAAGAAGA
AGAAGAAGAAGTCCAAGTCGAAAGAGGATGCGTCGGATGGAGAGGCGTGA
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Coding sequence (CDS) from alignment at ACJE01000010.1:880331..881580-

>ASPNIDRAFT_55540-T1 ID=ASPNIDRAFT_55540-T1|Name=ASPNIDRAFT_55540-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3312bp|location=Sequence derived from alignment at ACJE01000010.1:880331..881580- (Aspergillus niger ATCC 1015)
GCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATCAAGATCCG
CAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACGCATTC
TCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAAGCACC
TACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTACAAGGG
TCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAACATCCACC
CGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGGCCAAGGAC
CCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTCAAGAA
GCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAAGACGA
AGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGTGGAT
CTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGGATCG
GCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGAAGAGA
AGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGCTGGACGCA
GAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAAGAGAAGAA
GAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGACGATGGTG
CCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGAAAGAGGAT
GCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAAGACAATGT
CGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCCAAGT
ACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGCGCTC
GAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCATGAC
AGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAGGCCC
GTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGATGCCT
TCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGACAAGTG
GAAGGCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATCAAGA
TCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACGC
ATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAAG
CACCTACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTACA
AGGGTCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAACATC
CACCCGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGGCCAA
GGACCCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTCA
AGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAAG
ACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGT
GGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGG
ATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGAA
GAGAAGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGCTGGA
CGCAGAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAAGAGA
AGAAGAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGACGAT
GGTGCCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGAAAGA
GGATGCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAAGACA
ATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCC
AAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGC
GCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCA
TGACAGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAG
GCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGAT
GCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGACA
AGTGGAAGGCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATC
AAGATCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCA
ACGCATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCA
CAAGCACCTACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCC
TACAAGGGTCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAA
CATCCACCCGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGG
CCAAGGACCCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAAC
TTCAAGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGA
CAAGACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCA
AGGTGGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCG
AAGGATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCG
CGAAGAGAAGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGC
TGGACGCAGAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAA
GAGAAGAAGAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGA
CGATGGTGCCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGA
AAGAGGATGCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAA
GACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTT
CCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAA
GAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGT
AGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCT
CAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAAC
AGATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATT
GACAAGTGGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KRR1ASPNIDRAFT_55540Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55540-T1ASPNIDRAFT_55540-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55540-T1.cdsASPNIDRAFT_55540-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55540-T1.exon3ASPNIDRAFT_55540-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55540-T1.exon2ASPNIDRAFT_55540-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55540-T1.exon1ASPNIDRAFT_55540-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09263CG4
DBxrefInterPro:IPR041174
DBxrefInterPro:IPR024166
DBxrefInterPro:IPR036612
DBxrefInterPro:IPR004087
DBxrefPFAM:PF17903
Productribosomal RNA assembly protein krr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:880331..881580 -
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