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ASPNIDRAFT_55560-T1, ASPNIDRAFT_55560-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55560-T1
Unique NameASPNIDRAFT_55560-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1465070..1467302+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55560-T1 ID=ASPNIDRAFT_55560-T1|Name=ASPNIDRAFT_55560-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2233bp|location=Sequence derived from alignment at ACJE01000010.1:1465070..1467302+ (Aspergillus niger ATCC 1015)
CGCGTCGTCAACCTCACGATGGCACAGTTGCACATGCGACAGACAAGGCC
AGGATTGTCTGTGGGCTGCGGAATCAACCGGGACCATGACTGTGGCCGTG
TCTGATTGGGATAGAAGCCAAAAGTAAGGGGAGGCGTGCAGGCCTGAAAA
TGCCCGCATGGCCAATCCGCTTTGGGCCTGCGTCATCGCCGCTCATTGGA
ACGGCCGGCACTGGTCCTGTTTGGATTGGCTTGGATTGGGCCTCATCGTG
ATCCATTAAGTCATAGGCAGTTAGTTTAGAATCATAGTAGTCAGTTAGTC
ACTGCGTGTGTCTCTGTTCCCCCACTTGCTGCAATTGGCCTGGGTATCGT
GAAAAAGTCTTGGTCCCATTCACCGTTGCACTTTCCCGTTGTTTCCATCG
TGGGTGCCTCATTCTCCCTCATTTCCCTCAATTCCCTCATTATACTTTAT
ATACCCCTCCATTCCCCCTCTTCTTTCTCTCCGTCTTCTGCTCTTCAATT
CTCAACCCTTCCTTTGTCTTCACAACACCACTCTTCTCTTTCGCGATATC
AAACATCCTTTCATACTCCTGATCATCTTGCTTTACTTTTGATCAGTCTT
CCAATTACACTCTATCTCCCTTCTACTATCAGACTTCCACTACATCATGG
GAAAGAAGGCTATCCAGTTCGGCGGTGGTAACATCGGCCGTGGCTTCGTC
GCCGAATTCCTCCACAAGGCGGGCTACGAAGTAGTCTTCGTCGATGTCAT
GGACAAGATGGTCGAGGCTCTGCAGCAGAACAAGTCGTACAAGGTGACCG
AGGTCAGTGAGGAGGGTGAGCACACAACGACTATCACCAACTACCGTGCC
ATCAACTCCAAGACCCACGAGAGCGACGTCATTCAAGAGATTGCGACGGC
TGATGTCGTGACCTGTGCCGTGGGCCCCCACATTCTCAAGTTCATCGCCC
CTGTCATTGCCAAGGGTATCGATGCTCGCACAGAGTCTAAGCCTGTCGCT
GTTATTGCCTGTGAGAATGCCATTGGCGCTACCGACACCCTGCACGGCTT
CATCAAGCAGCACACCAGCCAGGACCGCGTTGAATCCCTGTATGACCGCG
CTCAGTTTGCCAACTCTGCCATTGACCGCATCGTCCCTCAGCAAGCCCCC
AACAGTGGCCTCGACGTCCGCATTGAGAAGTTCTACGAATGGGCTGTCGA
GAAGACTCCCTTTGGCTCTGTCGGCCACCCAGACATTCCTGCCATTCACT
GGGTCGACAACCTGGAGCCTTACATTGAGCGCAAATTGTTCACTGTCAAC
ACCAGCCATGCTACTACTACTGCCTACTTTGGACACTTCCGGGGCAAGAA
GATGATTGCCGACGCTCTGGAGGACGAGGAGATCCGTGGACTTGTTCACA
AGGTTCTCGAGGAGACTGCCTCACTCATCGTGGCTAAGCACGACATCTCG
GAGGAGGAGCAGAAAGAGTATGTCAAGAAGATCGTTAGCCGCATCTCTAA
CCCCTATCTGGAGGACAAGGTCGAACGTGTGGGCCGTGCTCCCCTGCGCA
AGCTGTCTCGCAAGGAACGGTTCATTGGACCGGCTTCGCAGCTGGCCGAG
CGCGGCATGAAGTATGACTCCTTGATGGATGCTGTCGAGATGGCTCTGCG
CTTCCAGAACGTGCCTGGTGACGACGAGAGTGCGGAGCTCGCCAACATTC
TCAACGAACAGCGGGCTGAAGATGCCACCATCCACCTCACCGGCCTGGAT
GAGGAACACCCACTGTATCCTGCCGTGCTAGAGCGGGTGCGCAAGGTGCA
GCAGGGGACGAAGTAAAGGCATTGCTACTGTCGCAAACTGTCTTCTTTAA
TGTTCACGATTACGATTACGAAAACTGCGAAAGCATTCCGAGTCGATCAC
CTGCATGTACAACTGGCCACGCCGCAGGACGGTGACAGGCCATCTGGGAT
ACGGCGAACACTGGTCGGCGCGGATATGGAGCATGGGTATGGAAACGGAT
TAGCATAGTCATAACATGATAATTATGTACATAGTTGCAGGCAACTAGCA
CGAATACATGACTGAAACATGAACCTATCTTGCTCAGGTATTTCTTAAAT
ACTAGTTGATCATAGATCTCAAAAGTATCACAACTTACTATCCCTCCACA
CAGGCTTCCTCTTCTCGACAAACGCCCTCAACCCCTCCTTAATATTCTCC
CCCTGATTCAACTTCTCCGACCACTCTTGAATC
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Coding sequence (CDS) from alignment at ACJE01000010.1:1465070..1467302+

>ASPNIDRAFT_55560-T1 ID=ASPNIDRAFT_55560-T1|Name=ASPNIDRAFT_55560-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1170bp|location=Sequence derived from alignment at ACJE01000010.1:1465070..1467302+ (Aspergillus niger ATCC 1015)
ATGGGAAAGAAGGCTATCCAGTTCGGCGGTGGTAACATCGGCCGTGGCTT
CGTCGCCGAATTCCTCCACAAGGCGGGCTACGAAGTAGTCTTCGTCGATG
TCATGGACAAGATGGTCGAGGCTCTGCAGCAGAACAAGTCGTACAAGGTG
ACCGAGGTCAGTGAGGAGGGTGAGCACACAACGACTATCACCAACTACCG
TGCCATCAACTCCAAGACCCACGAGAGCGACGTCATTCAAGAGATTGCGA
CGGCTGATGTCGTGACCTGTGCCGTGGGCCCCCACATTCTCAAGTTCATC
GCCCCTGTCATTGCCAAGGGTATCGATGCTCGCACAGAGTCTAAGCCTGT
CGCTGTTATTGCCTGTGAGAATGCCATTGGCGCTACCGACACCCTGCACG
GCTTCATCAAGCAGCACACCAGCCAGGACCGCGTTGAATCCCTGTATGAC
CGCGCTCAGTTTGCCAACTCTGCCATTGACCGCATCGTCCCTCAGCAAGC
CCCCAACAGTGGCCTCGACGTCCGCATTGAGAAGTTCTACGAATGGGCTG
TCGAGAAGACTCCCTTTGGCTCTGTCGGCCACCCAGACATTCCTGCCATT
CACTGGGTCGACAACCTGGAGCCTTACATTGAGCGCAAATTGTTCACTGT
CAACACCAGCCATGCTACTACTACTGCCTACTTTGGACACTTCCGGGGCA
AGAAGATGATTGCCGACGCTCTGGAGGACGAGGAGATCCGTGGACTTGTT
CACAAGGTTCTCGAGGAGACTGCCTCACTCATCGTGGCTAAGCACGACAT
CTCGGAGGAGGAGCAGAAAGAGTATGTCAAGAAGATCGTTAGCCGCATCT
CTAACCCCTATCTGGAGGACAAGGTCGAACGTGTGGGCCGTGCTCCCCTG
CGCAAGCTGTCTCGCAAGGAACGGTTCATTGGACCGGCTTCGCAGCTGGC
CGAGCGCGGCATGAAGTATGACTCCTTGATGGATGCTGTCGAGATGGCTC
TGCGCTTCCAGAACGTGCCTGGTGACGACGAGAGTGCGGAGCTCGCCAAC
ATTCTCAACGAACAGCGGGCTGAAGATGCCACCATCCACCTCACCGGCCT
GGATGAGGAACACCCACTGTATCCTGCCGTGCTAGAGCGGGTGCGCAAGG
TGCAGCAGGGGACGAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019594mannitol metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008926mannitol-1-phosphate 5-dehydrogenase activity
GO:0050662obsolete coenzyme binding
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55560ASPNIDRAFT_55560Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55560-T1.utr5p1ASPNIDRAFT_55560-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55560-T1.exon1ASPNIDRAFT_55560-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55560-T1.cdsASPNIDRAFT_55560-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55560-T1.utr3p1ASPNIDRAFT_55560-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55560-T1ASPNIDRAFT_55560-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR023028
DBxrefInterPro:IPR013118
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR013131
DBxrefInterPro:IPR000669
DBxrefPFAM:PF08125
DBxrefPFAM:PF01232
Productmannitol-1-phosphate 5-dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1465070..1467302 +
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