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ASPNIDRAFT_55566-T1, ASPNIDRAFT_55566-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55566-T1
Unique NameASPNIDRAFT_55566-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1568657..1570410+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55566-T1 ID=ASPNIDRAFT_55566-T1|Name=ASPNIDRAFT_55566-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1754bp|location=Sequence derived from alignment at ACJE01000010.1:1568657..1570410+ (Aspergillus niger ATCC 1015)
CTTACTTTTAATCATTTTCTTTTATTCTCCTTCTTCCCCCCCATACATCA
TACTCTCCGCAATAGCTCTCTTTCTTGAGTGTTTTGTGTCTTAAACTCTA
CTGTCCCACTTTCCGCTTAATACTTACCCCTCCTCCTTTTACACATTCAC
CATGGCTGCCCGTCCTCAGAACATTGGTATCAAGGCCATTGAGGTCTACT
TCCCTCGTCAGGTTCGTGCCTCTTGCCACCCCATGACTATCTGCTGCTTC
CTATTTTGAGCTGTGTTCTAATATGTCCCCGTGCTTTCTAGTGTGTCGAC
CAGAGCGAGCTTGAGAAATTCGATGGCGTGAGCGAAGGCAAATACACCAT
TGGTCTTGGTCAGACCAAGATGAGCTTCTGTGATGACCGTGAAGGTATGC
TTTTGAGGAAATGACAGACATCGTCCGCATGTCATGATTGCGTGGCAATG
CTAACATGCACTTACCGGCAGACATCTACTCCATTGCTTTGACCACCTTC
TCCTCCCTTCTCCGCAAGTACAACATCGACCCCAACTCCATTGGCCGCCT
GGAGGTCGGTACCGAGACCTTGCTGGACAAGTCCAAGTCCGTCAAGTCCG
TCCTGATGCAGCTTCTGGCTCCCCACGGAAACACCAACGTTGAGGGTGTT
GACAACGTCAATGCTTGCTACGGTGGCACCAACGCTGTTTTCAACAGCAT
CAACTGGCTCGAGTCCTCTGCCTGGGATGGCAGAGATGCCGTTGTTGTCT
GCGGTGACATTGCCCTGTACGCCGAGGGTGCTGCTCGCCCTACCGGTGGT
GCTGGCTGTGTCGCCATGCTGATCGGTCCTGACGCCCCTATTGTGTTCGA
GCCCGGTCTTCGTGCCTCCTACGTCACCCACGCCTACGACTTCTTCAAGC
CCGACCTGACCAGCGAGTACCCTGTCGTGGATGGTCACTTCTCCCTCAGA
TGCTACACTGAGGCTGTCGACGCTTGCTACAAGGCCTACAATGCTCGTGA
GAAGACCTTGAAGGAGAAGGTTCAGAACGGTACCAACGGCACCGCCCAGG
ACGACTCCAAGACTGCCTTGGACCGCTTCGACTACCTCTGCTACCATGCT
CCTACCTGCAAGCTGGTGCAGAAATCCTTCGCTCGTATGCTGTACAACGA
CTACCTCACAAACCCCACTCACCCTGCTTTCGCCGAAGTGGCTCCTGAGC
TCCGTGATTTGGACTACGCCACCTCTCTCACTGACAAGAACGTGGAGAAG
ACCTTCATGGGCCTGACCAAGAAGCGCTTCGCTGAGCGTGTTAAGCCCGC
TCTCGAGGTTGCCACTCTTTGCGGTAACATGTACACTGCCACCGTTTGGG
CTGGTCTGGCTAGCTTGATCTCTCACGTCCCCTTCGATGCTAGCGAGTCC
AAGCGCATCGGTCTCTTCTCCTACGGCAGTGGTCTTGCCAGCTCCCTGCT
TAGCGTAAAGATTGTCGGAGACGTGTCCAACCTGGTGGAGAAGCTCGATC
TCAAGAACCGTCTTAGCAACCGCAACGTTCTCCCTCCTCAGTCCTACGTT
GACGTAAGTACTTCAACGACTATCTTTGACCCACACCTTGAACTCTAGTT
GCTAACGTCCACTTAGATGTGTGCCCTCCGTGAGCATGCTCACCTCAAGA
AGAACTTCAAGCCTTCCGGCAACACCGAGACTCTCTACCCTGGTACTTAC
TACTTGACTGAGGTGGACGATATGTTCCGCCGCAAGTACGACGTCAAGGC
ATGA
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Coding sequence (CDS) from alignment at ACJE01000010.1:1568657..1570410+

>ASPNIDRAFT_55566-T1 ID=ASPNIDRAFT_55566-T1|Name=ASPNIDRAFT_55566-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5532bp|location=Sequence derived from alignment at ACJE01000010.1:1568657..1570410+ (Aspergillus niger ATCC 1015)
ATGGCTGCCCGTCCTCAGAACATTGGTATCAAGGCCATTGAGGTCTACTT
CCCTCGTCAGTGTGTCGACCAGAGCGAGCTTGAGAAATTCGATGGCGTGA
GCGAAGGCAAATACACCATTGGTCTTGGTCAGACCAAGATGAGCTTCTGT
GATGACCGTGAAGACATCTACTCCATTGCTTTGACCACCTTCTCCTCCCT
TCTCCGCAAGTACAACATCGACCCCAACTCCATTGGCCGCCTGGAGGTCG
GTACCGAGACCTTGCTGGACAAGTCCAAGTCCGTCAAGTCCGTCCTGATG
CAGCTTCTGGCTCCCCACGGAAACACCAACGTTGAGGGTGTTGACAACGT
CAATGCTTGCTACGGTGGCACCAACGCTGTTTTCAACAGCATCAACTGGC
TCGAGTCCTCTGCCTGGGATGGCAGAGATGCCGTTGTTGTCTGCGGTGAC
ATTGCCCTGTACGCCGAGGGTGCTGCTCGCCCTACCGGTGGTGCTGGCTG
TGTCGCCATGCTGATCGGTCCTGACGCCCCTATTGTGTTCGAGCCCGGTC
TTCGTGCCTCCTACGTCACCCACGCCTACGACTTCTTCAAGCCCGACCTG
ACCAGCGAGTACCCTGTCGTGGATGGTCACTTCTCCCTCAGATGCTACAC
TGAGGCTGTCGACGCTTGCTACAAGGCCTACAATGCTCGTGAGAAGACCT
TGAAGGAGAAGGTTCAGAACGGTACCAACGGCACCGCCCAGGACGACTCC
AAGACTGCCTTGGACCGCTTCGACTACCTCTGCTACCATGCTCCTACCTG
CAAGCTGGTGCAGAAATCCTTCGCTCGTATGCTGTACAACGACTACCTCA
CAAACCCCACTCACCCTGCTTTCGCCGAAGTGGCTCCTGAGCTCCGTGAT
TTGGACTACGCCACCTCTCTCACTGACAAGAACGTGGAGAAGACCTTCAT
GGGCCTGACCAAGAAGCGCTTCGCTGAGCGTGTTAAGCCCGCTCTCGAGG
TTGCCACTCTTTGCGGTAACATGTACACTGCCACCGTTTGGGCTGGTCTG
GCTAGCTTGATCTCTCACGTCCCCTTCGATGCTAGCGAGTCCAAGCGCAT
CGGTCTCTTCTCCTACGGCAGTGGTCTTGCCAGCTCCCTGCTTAGCGTAA
AGATTGTCGGAGACGTGTCCAACCTGGTGGAGAAGCTCGATCTCAAGAAC
CGTCTTAGCAACCGCAACGTTCTCCCTCCTCAGTCCTACGTTGACATGTG
TGCCCTCCGTGAGCATGCTCACCTCAAGAAGAACTTCAAGCCTTCCGGCA
ACACCGAGACTCTCTACCCTGGTACTTACTACTTGACTGAGGTGGACGAT
ATGTTCCGCCGCAAGTACGACGTCAAGGCATGAATGGCTGCCCGTCCTCA
GAACATTGGTATCAAGGCCATTGAGGTCTACTTCCCTCGTCAGTGTGTCG
ACCAGAGCGAGCTTGAGAAATTCGATGGCGTGAGCGAAGGCAAATACACC
ATTGGTCTTGGTCAGACCAAGATGAGCTTCTGTGATGACCGTGAAGACAT
CTACTCCATTGCTTTGACCACCTTCTCCTCCCTTCTCCGCAAGTACAACA
TCGACCCCAACTCCATTGGCCGCCTGGAGGTCGGTACCGAGACCTTGCTG
GACAAGTCCAAGTCCGTCAAGTCCGTCCTGATGCAGCTTCTGGCTCCCCA
CGGAAACACCAACGTTGAGGGTGTTGACAACGTCAATGCTTGCTACGGTG
GCACCAACGCTGTTTTCAACAGCATCAACTGGCTCGAGTCCTCTGCCTGG
GATGGCAGAGATGCCGTTGTTGTCTGCGGTGACATTGCCCTGTACGCCGA
GGGTGCTGCTCGCCCTACCGGTGGTGCTGGCTGTGTCGCCATGCTGATCG
GTCCTGACGCCCCTATTGTGTTCGAGCCCGGTCTTCGTGCCTCCTACGTC
ACCCACGCCTACGACTTCTTCAAGCCCGACCTGACCAGCGAGTACCCTGT
CGTGGATGGTCACTTCTCCCTCAGATGCTACACTGAGGCTGTCGACGCTT
GCTACAAGGCCTACAATGCTCGTGAGAAGACCTTGAAGGAGAAGGTTCAG
AACGGTACCAACGGCACCGCCCAGGACGACTCCAAGACTGCCTTGGACCG
CTTCGACTACCTCTGCTACCATGCTCCTACCTGCAAGCTGGTGCAGAAAT
CCTTCGCTCGTATGCTGTACAACGACTACCTCACAAACCCCACTCACCCT
GCTTTCGCCGAAGTGGCTCCTGAGCTCCGTGATTTGGACTACGCCACCTC
TCTCACTGACAAGAACGTGGAGAAGACCTTCATGGGCCTGACCAAGAAGC
GCTTCGCTGAGCGTGTTAAGCCCGCTCTCGAGGTTGCCACTCTTTGCGGT
AACATGTACACTGCCACCGTTTGGGCTGGTCTGGCTAGCTTGATCTCTCA
CGTCCCCTTCGATGCTAGCGAGTCCAAGCGCATCGGTCTCTTCTCCTACG
GCAGTGGTCTTGCCAGCTCCCTGCTTAGCGTAAAGATTGTCGGAGACGTG
TCCAACCTGGTGGAGAAGCTCGATCTCAAGAACCGTCTTAGCAACCGCAA
CGTTCTCCCTCCTCAGTCCTACGTTGACATGTGTGCCCTCCGTGAGCATG
CTCACCTCAAGAAGAACTTCAAGCCTTCCGGCAACACCGAGACTCTCTAC
CCTGGTACTTACTACTTGACTGAGGTGGACGATATGTTCCGCCGCAAGTA
CGACGTCAAGGCATGAATGGCTGCCCGTCCTCAGAACATTGGTATCAAGG
CCATTGAGGTCTACTTCCCTCGTCAGTGTGTCGACCAGAGCGAGCTTGAG
AAATTCGATGGCGTGAGCGAAGGCAAATACACCATTGGTCTTGGTCAGAC
CAAGATGAGCTTCTGTGATGACCGTGAAGACATCTACTCCATTGCTTTGA
CCACCTTCTCCTCCCTTCTCCGCAAGTACAACATCGACCCCAACTCCATT
GGCCGCCTGGAGGTCGGTACCGAGACCTTGCTGGACAAGTCCAAGTCCGT
CAAGTCCGTCCTGATGCAGCTTCTGGCTCCCCACGGAAACACCAACGTTG
AGGGTGTTGACAACGTCAATGCTTGCTACGGTGGCACCAACGCTGTTTTC
AACAGCATCAACTGGCTCGAGTCCTCTGCCTGGGATGGCAGAGATGCCGT
TGTTGTCTGCGGTGACATTGCCCTGTACGCCGAGGGTGCTGCTCGCCCTA
CCGGTGGTGCTGGCTGTGTCGCCATGCTGATCGGTCCTGACGCCCCTATT
GTGTTCGAGCCCGGTCTTCGTGCCTCCTACGTCACCCACGCCTACGACTT
CTTCAAGCCCGACCTGACCAGCGAGTACCCTGTCGTGGATGGTCACTTCT
CCCTCAGATGCTACACTGAGGCTGTCGACGCTTGCTACAAGGCCTACAAT
GCTCGTGAGAAGACCTTGAAGGAGAAGGTTCAGAACGGTACCAACGGCAC
CGCCCAGGACGACTCCAAGACTGCCTTGGACCGCTTCGACTACCTCTGCT
ACCATGCTCCTACCTGCAAGCTGGTGCAGAAATCCTTCGCTCGTATGCTG
TACAACGACTACCTCACAAACCCCACTCACCCTGCTTTCGCCGAAGTGGC
TCCTGAGCTCCGTGATTTGGACTACGCCACCTCTCTCACTGACAAGAACG
TGGAGAAGACCTTCATGGGCCTGACCAAGAAGCGCTTCGCTGAGCGTGTT
AAGCCCGCTCTCGAGGTTGCCACTCTTTGCGGTAACATGTACACTGCCAC
CGTTTGGGCTGGTCTGGCTAGCTTGATCTCTCACGTCCCCTTCGATGCTA
GCGAGTCCAAGCGCATCGGTCTCTTCTCCTACGGCAGTGGTCTTGCCAGC
TCCCTGCTTAGCGTAAAGATTGTCGGAGACGTGTCCAACCTGGTGGAGAA
GCTCGATCTCAAGAACCGTCTTAGCAACCGCAACGTTCTCCCTCCTCAGT
CCTACGTTGACATGTGTGCCCTCCGTGAGCATGCTCACCTCAAGAAGAAC
TTCAAGCCTTCCGGCAACACCGAGACTCTCTACCCTGGTACTTACTACTT
GACTGAGGTGGACGATATGTTCCGCCGCAAGTACGACGTCAAGGCATGAA
TGGCTGCCCGTCCTCAGAACATTGGTATCAAGGCCATTGAGGTCTACTTC
CCTCGTCAGTGTGTCGACCAGAGCGAGCTTGAGAAATTCGATGGCGTGAG
CGAAGGCAAATACACCATTGGTCTTGGTCAGACCAAGATGAGCTTCTGTG
ATGACCGTGAAGACATCTACTCCATTGCTTTGACCACCTTCTCCTCCCTT
CTCCGCAAGTACAACATCGACCCCAACTCCATTGGCCGCCTGGAGGTCGG
TACCGAGACCTTGCTGGACAAGTCCAAGTCCGTCAAGTCCGTCCTGATGC
AGCTTCTGGCTCCCCACGGAAACACCAACGTTGAGGGTGTTGACAACGTC
AATGCTTGCTACGGTGGCACCAACGCTGTTTTCAACAGCATCAACTGGCT
CGAGTCCTCTGCCTGGGATGGCAGAGATGCCGTTGTTGTCTGCGGTGACA
TTGCCCTGTACGCCGAGGGTGCTGCTCGCCCTACCGGTGGTGCTGGCTGT
GTCGCCATGCTGATCGGTCCTGACGCCCCTATTGTGTTCGAGCCCGGTCT
TCGTGCCTCCTACGTCACCCACGCCTACGACTTCTTCAAGCCCGACCTGA
CCAGCGAGTACCCTGTCGTGGATGGTCACTTCTCCCTCAGATGCTACACT
GAGGCTGTCGACGCTTGCTACAAGGCCTACAATGCTCGTGAGAAGACCTT
GAAGGAGAAGGTTCAGAACGGTACCAACGGCACCGCCCAGGACGACTCCA
AGACTGCCTTGGACCGCTTCGACTACCTCTGCTACCATGCTCCTACCTGC
AAGCTGGTGCAGAAATCCTTCGCTCGTATGCTGTACAACGACTACCTCAC
AAACCCCACTCACCCTGCTTTCGCCGAAGTGGCTCCTGAGCTCCGTGATT
TGGACTACGCCACCTCTCTCACTGACAAGAACGTGGAGAAGACCTTCATG
GGCCTGACCAAGAAGCGCTTCGCTGAGCGTGTTAAGCCCGCTCTCGAGGT
TGCCACTCTTTGCGGTAACATGTACACTGCCACCGTTTGGGCTGGTCTGG
CTAGCTTGATCTCTCACGTCCCCTTCGATGCTAGCGAGTCCAAGCGCATC
GGTCTCTTCTCCTACGGCAGTGGTCTTGCCAGCTCCCTGCTTAGCGTAAA
GATTGTCGGAGACGTGTCCAACCTGGTGGAGAAGCTCGATCTCAAGAACC
GTCTTAGCAACCGCAACGTTCTCCCTCCTCAGTCCTACGTTGACATGTGT
GCCCTCCGTGAGCATGCTCACCTCAAGAAGAACTTCAAGCCTTCCGGCAA
CACCGAGACTCTCTACCCTGGTACTTACTACTTGACTGAGGTGGACGATA
TGTTCCGCCGCAAGTACGACGTCAAGGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004421hydroxymethylglutaryl-CoA synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERG13ASPNIDRAFT_55566Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55566-T1ASPNIDRAFT_55566-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55566-T1.utr5p1ASPNIDRAFT_55566-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55566-T1.exon1ASPNIDRAFT_55566-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55566-T1.exon2ASPNIDRAFT_55566-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55566-T1.exon3ASPNIDRAFT_55566-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55566-T1.exon4ASPNIDRAFT_55566-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55566-T1.cdsASPNIDRAFT_55566-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR000590
DBxrefInterPro:IPR013528
DBxrefInterPro:IPR013746
DBxrefInterPro:IPR016039
DBxrefInterPro:IPR010122
DBxrefPFAM:PF01154
DBxrefPFAM:PF08540
Product3-hydroxy-3-methylglutaryl coenzyme A synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1568657..1570410 +
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