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ASPNIDRAFT_55644-T1, ASPNIDRAFT_55644-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55644-T1
Unique NameASPNIDRAFT_55644-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3472604..3473730-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55644-T1 ID=ASPNIDRAFT_55644-T1|Name=ASPNIDRAFT_55644-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1127bp|location=Sequence derived from alignment at ACJE01000010.1:3472604..3473730- (Aspergillus niger ATCC 1015)
TGTACGACAACCTCGCGACAAGCCGCAATCAGCAGTCATGGCCCCCGTCC
CGTGAGTATACGACCGGCGATCAACCACACCTGTATCGCATCATTCTAAT
AGCAATTTTCTCAACAGCCGCGTTTACTCCAAGACCTACAAGGTCCCCCG
TCGTCGTAAGTAGCCTTATCAGTCTTTGCAAAAATTCGAGACTTCGCGAC
ATTGAATCTTGGACTAACATATCGGTATAGCTTTCGAGTCGGCCCGTCTG
TTAGTACTCTCCGGCCACTGATCAGAAGCGTGCTTCTGTTTATGTCGTGT
GTTCCCATGCCTAACTGTCATCGCTAGTGACTCGGAACTGAAGATTGTCG
GCGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACC
CTGTCCAAGATTCGTCGTGCTGCTCGGTATGCGCACCCCACTTCGCATGG
ATCATCGACCTTGAGAATGGCCAGGAGAAATTGATGGAACAATGGCTGAC
TGTTAGAACAGTGAGCTTCTCACCCTCGACGAGAAGGACCCCAAGCGTCT
TTTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGCATCGGTGTCCTCG
ATGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCTCCGCGTTGAGGAC
TTCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGCTCGGCCTTGCCAA
GTCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGTCACATCCGGTATG
CGCATTCGATAACTTTTTCGGCCGATGACGCCAAGATGCTAACTCGAAGA
ACAGTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTCCGCCTG
GACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCTACGGTGGTGG
CCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCGGTGGTG
GTGACGACGAGGCTGAGGAGGATGAGGAGTAAAGGATTAAAAATTGGAGT
ACGGACGGGTTTCGTTAGCCAAAATAAAATTGCGGGGCTCCGTTATGGCT
GCAGCATAGCGTATAACGTTGTACGATCATGCGATTCCATGAATGAACTA
GTAGCCTACGGCTCGATTCCCATACCC
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Coding sequence (CDS) from alignment at ACJE01000010.1:3472604..3473730-

>ASPNIDRAFT_55644-T1 ID=ASPNIDRAFT_55644-T1|Name=ASPNIDRAFT_55644-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3492bp|location=Sequence derived from alignment at ACJE01000010.1:3472604..3473730- (Aspergillus niger ATCC 1015)
TGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTCCGCCTGGACT
CCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCTACGGTGGTGGCCGC
CCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGA
CGACGAGGCTGAGGAGGATGAGGAGTAATGAGCTTCTCACCCTCGACGAG
AAGGACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTGGT
CCGCATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCTGG
CCCTCCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCTAC
AAGCTCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAGCA
GCGTCACATCCGTGACTCGGAACTGAAGATTGTCGGCGAGTACGGCCTGC
GCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACCCTGTCCAAGATTCGT
CGTGCTGCTCGCTTTCGAGTCGGCCCGTCTCCGCGTTTACTCCAAGACCT
ACAAGGTCCCCCGTCGTCATGGCCCCCGTCCCTGTCGGCAAGCAGATCGT
CAACGTCCCCTCCTACATGGTCCGCCTGGACTCCCAGAAGCACATCGACT
TCGCCCTCACCTCCCCCTACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGC
AAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGACGACGAGGCTGAGGAGGA
TGAGGAGTAATGAGCTTCTCACCCTCGACGAGAAGGACCCCAAGCGTCTT
TTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGCATCGGTGTCCTCGA
TGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCTCCGCGTTGAGGACT
TCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGCTCGGCCTTGCCAAG
TCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGTCACATCCGTGACTC
GGAACTGAAGATTGTCGGCGAGTACGGCCTGCGCAACAAGCGTGAGGTGT
GGCGTGTCCAGCTCACCCTGTCCAAGATTCGTCGTGCTGCTCGCTTTCGA
GTCGGCCCGTCTCCGCGTTTACTCCAAGACCTACAAGGTCCCCCGTCGTC
ATGGCCCCCGTCCCTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACAT
GGTCCGCCTGGACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCT
ACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCT
GCCGGTGGTGGTGACGACGAGGCTGAGGAGGATGAGGAGTAATGAGCTTC
TCACCCTCGACGAGAAGGACCCCAAGCGTCTTTTCGAAGGTAACGCTTTG
ATTCGCCGTCTGGTCCGCATCGGTGTCCTCGATGAGTCCCGCATGAAGCT
CGATTACGTCCTGGCCCTCCGCGTTGAGGACTTCTTGGAGCGTCGTCTTC
AGACTTGCGTCTACAAGCTCGGCCTTGCCAAGTCCATCCACCACGCCCGT
GTCCTGATCAAGCAGCGTCACATCCGTGACTCGGAACTGAAGATTGTCGG
CGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACCC
TGTCCAAGATTCGTCGTGCTGCTCGCTTTCGAGTCGGCCCGTCTCCGCGT
TTACTCCAAGACCTACAAGGTCCCCCGTCGTCATGGCCCCCGTCCCTGTC
GGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTCCGCCTGGACTCCCA
GAAGCACATCGACTTCGCCCTCACCTCCCCCTACGGTGGTGGCCGCCCTG
GCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGACGAC
GAGGCTGAGGAGGATGAGGAGTAATGAGCTTCTCACCCTCGACGAGAAGG
ACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGC
ATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCT
CCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGC
TCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGT
CACATCCGTGACTCGGAACTGAAGATTGTCGGCGAGTACGGCCTGCGCAA
CAAGCGTGAGGTGTGGCGTGTCCAGCTCACCCTGTCCAAGATTCGTCGTG
CTGCTCGCTTTCGAGTCGGCCCGTCTCCGCGTTTACTCCAAGACCTACAA
GGTCCCCCGTCGTCATGGCCCCCGTCCCTGTCGGCAAGCAGATCGTCAAC
GTCCCCTCCTACATGGTCCGCCTGGACTCCCAGAAGCACATCGACTTCGC
CCTCACCTCCCCCTACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGA
AGGCTGCCGCTGCTGCCGGTGGTGGTGACGACGAGGCTGAGGAGGATGAG
GAGTAATGAGCTTCTCACCCTCGACGAGAAGGACCCCAAGCGTCTTTTCG
AAGGTAACGCTTTGATTCGCCGTCTGGTCCGCATCGGTGTCCTCGATGAG
TCCCGCATGAAGCTCGATTACGTCCTGGCCCTCCGCGTTGAGGACTTCTT
GGAGCGTCGTCTTCAGACTTGCGTCTACAAGCTCGGCCTTGCCAAGTCCA
TCCACCACGCCCGTGTCCTGATCAAGCAGCGTCACATCCGTGACTCGGAA
CTGAAGATTGTCGGCGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCG
TGTCCAGCTCACCCTGTCCAAGATTCGTCGTGCTGCTCGCTTTCGAGTCG
GCCCGTCTCCGCGTTTACTCCAAGACCTACAAGGTCCCCCGTCGTCATGG
CCCCCGTCCCTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTC
CGCCTGGACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCTACGG
TGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCG
GTGGTGGTGACGACGAGGCTGAGGAGGATGAGGAGTAATGAGCTTCTCAC
CCTCGACGAGAAGGACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTC
GCCGTCTGGTCCGCATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGAT
TACGTCCTGGCCCTCCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGAC
TTGCGTCTACAAGCTCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCC
TGATCAAGCAGCGTCACATCCGTGACTCGGAACTGAAGATTGTCGGCGAG
TACGGCCTGCGCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACCCTGTC
CAAGATTCGTCGTGCTGCTCGCTTTCGAGTCGGCCCGTCTCCGCGTTTAC
TCCAAGACCTACAAGGTCCCCCGTCGTCATGGCCCCCGTCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS9ASPNIDRAFT_55644Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55644-T1ASPNIDRAFT_55644-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55644-T1.cdsASPNIDRAFT_55644-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55644-T1.utr3p1ASPNIDRAFT_55644-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55644-T1.exon6ASPNIDRAFT_55644-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55644-T1.exon5ASPNIDRAFT_55644-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55644-T1.exon4ASPNIDRAFT_55644-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55644-T1.exon3ASPNIDRAFT_55644-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55644-T1.exon2ASPNIDRAFT_55644-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55644-T1.exon1ASPNIDRAFT_55644-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55644-T1.utr5p1ASPNIDRAFT_55644-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018079
DBxrefInterPro:IPR036986
DBxrefInterPro:IPR005710
DBxrefInterPro:IPR001912
DBxrefInterPro:IPR002942
DBxrefPFAM:PF01479
DBxrefPFAM:PF00163
Product40S ribosomal protein S9
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3472604..3473730 -
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