You are here

Home

ASPNIDRAFT_55755-T1, ASPNIDRAFT_55755-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55755-T1
Unique NameASPNIDRAFT_55755-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1557996..1558903-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55755-T1 ID=ASPNIDRAFT_55755-T1|Name=ASPNIDRAFT_55755-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=908bp|location=Sequence derived from alignment at ACJE01000021.1:1557996..1558903- (Aspergillus niger ATCC 1015)
ATGTCTACCTTCCTCCAGCAGATCTACCGCCTCGCGGTTCCCATCTCGGC
GGGAGTCTACATCTTCAACTCCTCCATTTACGATGTTCGTGGTGGTACCC
GCGCTGTCATCTTCGACCGATTGTCCGGAGTGCAGGAGAAGGTCATGAAC
GAGGGCACACACTTCCTCATCCCTTGGTTGCAGCGAGCTATTATCTATGA
TGTTCGCACCAAGCCCCGCAACATTTCCACCACCACGGGTAGTAAGGACT
TGCAGATGGTCAGCTTGACTCTGCGTGTGCTGCACCGTCCTGAGGTCCCG
AAGCTGCCGGCCATCTACCAGGTAAGATGCCTGTGCCCTTTTTATACCCG
ACTGGGTCCATTCCCTCTAACCATGACTCTCCCAAATAGTCCTACGGTAT
CGACTACGATGAGCGTGTGCTCCCATCCATCGGAAACGAAGTTCTCAAAG
CCATTGTCGCTCAGTTCGATGCCGCCGAACTGATCACCCAGCGTGAAGCT
GTCTCCAACCGCATCCGCACAGACCTCATGAAGAGAGCTTCTCAGTTCAA
CATCGCCCTTGAGGACGTCTCCATTACCCACATGACCTTCGGAAAGGAAT
TCACCCGTGCCGTCGAGCAGAAGCAGATCGCCCAGCAGGACGCCGAGCGG
GCCCGTTTCATTGTCGAGAGGGCCGAGCAGGAACGTCAGGCCAATGTCAT
CCGCGCCGAGGGTGAAGCCGAGAGTGCCGATATTATCAGCAAGGCTGTTG
CCAAGGCGGGCAGCGGCTTGATTGAGATTCGTCGTATCGATGCCAGCAAG
GAGATCGCGACGACGCTTGCCAACAACCCCAACGTCACGTATCTGCCTGG
TAACGATGGCAAGGAAGGCGGAAAGAGCACTAGCCTCTTGCTGGGCTTGA
GAAACTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1557996..1558903-

>ASPNIDRAFT_55755-T1 ID=ASPNIDRAFT_55755-T1|Name=ASPNIDRAFT_55755-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1680bp|location=Sequence derived from alignment at ACJE01000021.1:1557996..1558903- (Aspergillus niger ATCC 1015)
TCCTACGGTATCGACTACGATGAGCGTGTGCTCCCATCCATCGGAAACGA
AGTTCTCAAAGCCATTGTCGCTCAGTTCGATGCCGCCGAACTGATCACCC
AGCGTGAAGCTGTCTCCAACCGCATCCGCACAGACCTCATGAAGAGAGCT
TCTCAGTTCAACATCGCCCTTGAGGACGTCTCCATTACCCACATGACCTT
CGGAAAGGAATTCACCCGTGCCGTCGAGCAGAAGCAGATCGCCCAGCAGG
ACGCCGAGCGGGCCCGTTTCATTGTCGAGAGGGCCGAGCAGGAACGTCAG
GCCAATGTCATCCGCGCCGAGGGTGAAGCCGAGAGTGCCGATATTATCAG
CAAGGCTGTTGCCAAGGCGGGCAGCGGCTTGATTGAGATTCGTCGTATCG
ATGCCAGCAAGGAGATCGCGACGACGCTTGCCAACAACCCCAACGTCACG
TATCTGCCTGGTAACGATGGCAAGGAAGGCGGAAAGAGCACTAGCCTCTT
GCTGGGCTTGAGAAACTAGATGTCTACCTTCCTCCAGCAGATCTACCGCC
TCGCGGTTCCCATCTCGGCGGGAGTCTACATCTTCAACTCCTCCATTTAC
GATGTTCGTGGTGGTACCCGCGCTGTCATCTTCGACCGATTGTCCGGAGT
GCAGGAGAAGGTCATGAACGAGGGCACACACTTCCTCATCCCTTGGTTGC
AGCGAGCTATTATCTATGATGTTCGCACCAAGCCCCGCAACATTTCCACC
ACCACGGGTAGTAAGGACTTGCAGATGGTCAGCTTGACTCTGCGTGTGCT
GCACCGTCCTGAGGTCCCGAAGCTGCCGGCCATCTACCAGTCCTACGGTA
TCGACTACGATGAGCGTGTGCTCCCATCCATCGGAAACGAAGTTCTCAAA
GCCATTGTCGCTCAGTTCGATGCCGCCGAACTGATCACCCAGCGTGAAGC
TGTCTCCAACCGCATCCGCACAGACCTCATGAAGAGAGCTTCTCAGTTCA
ACATCGCCCTTGAGGACGTCTCCATTACCCACATGACCTTCGGAAAGGAA
TTCACCCGTGCCGTCGAGCAGAAGCAGATCGCCCAGCAGGACGCCGAGCG
GGCCCGTTTCATTGTCGAGAGGGCCGAGCAGGAACGTCAGGCCAATGTCA
TCCGCGCCGAGGGTGAAGCCGAGAGTGCCGATATTATCAGCAAGGCTGTT
GCCAAGGCGGGCAGCGGCTTGATTGAGATTCGTCGTATCGATGCCAGCAA
GGAGATCGCGACGACGCTTGCCAACAACCCCAACGTCACGTATCTGCCTG
GTAACGATGGCAAGGAAGGCGGAAAGAGCACTAGCCTCTTGCTGGGCTTG
AGAAACTAGATGTCTACCTTCCTCCAGCAGATCTACCGCCTCGCGGTTCC
CATCTCGGCGGGAGTCTACATCTTCAACTCCTCCATTTACGATGTTCGTG
GTGGTACCCGCGCTGTCATCTTCGACCGATTGTCCGGAGTGCAGGAGAAG
GTCATGAACGAGGGCACACACTTCCTCATCCCTTGGTTGCAGCGAGCTAT
TATCTATGATGTTCGCACCAAGCCCCGCAACATTTCCACCACCACGGGTA
GTAAGGACTTGCAGATGGTCAGCTTGACTCTGCGTGTGCTGCACCGTCCT
GAGGTCCCGAAGCTGCCGGCCATCTACCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PHB1ASPNIDRAFT_55755Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55755-T1ASPNIDRAFT_55755-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55755-T1.cdsASPNIDRAFT_55755-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55755-T1.exon2ASPNIDRAFT_55755-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55755-T1.exon1ASPNIDRAFT_55755-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036013
DBxrefInterPro:IPR001107
DBxrefInterPro:IPR000163
DBxrefPFAM:PF01145
Product subunit of the prohibitin complex (Phb1p-Phb2p)
ProductProhibitin-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1557996..1558903 -
Powered by Drupal