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ASPNIDRAFT_55985-T1, ASPNIDRAFT_55985-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55985-T1
Unique NameASPNIDRAFT_55985-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1200870..1203122-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55985-T1 ID=ASPNIDRAFT_55985-T1|Name=ASPNIDRAFT_55985-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2253bp|location=Sequence derived from alignment at ACJE01000019.1:1200870..1203122- (Aspergillus niger ATCC 1015)
CCCACATACACCATGGCCGACCAGACCCCCGATTCCTGGGAGGATGAGCT
CTCCAGACAGACTGAGGGCGTCCGTCTGAACCCCAACGCACAAGGCCGCC
CTCAGCCTCAGGCTCCTTCTTTCCACCCTGGTGCTGCCACTTTCACCCCC
GGCGCTGCTTCCTTCGTCCCTGGACAGGCCTACCAGCCCTACGGCGGCGG
TTTCCCGCAATATGGCCAGTACGGCCAGCAGGCTTACGGTGGATACCCTT
ATGACCAGCAGCAGCAGGCCTATGCCCAATACGGCGCCTACGCTCAGCAA
CCTGGTGGCTTTAACAACAACCAGATCTACAACCAGCAATACGGTGGTTA
CCAGCAGCAGCAACAGCAGCCCCGTCAAGCTGCCGCCCCCGCTGCCGCCC
AGCCCGCTCAGCCCGCCCCGAAGCCTGCCGCAAGCAACGCTGCTCCCCCC
AAGGCCAAGGTCCTGTCTATTGGCGGCGCCAGCAACTCCCCCGCCGCTCC
CAAGACCAAGGTTCTTTCCATCGGCACCCCCTCCCCCGCTCCCACCTCGA
GCACGCCTTCTTCGACCTCCGGTGCCGCTACGCCTGGAGATACCAAGGGT
GCTGCCGCTGTTGAGGCGGCCGCTAAGGTGACGGCTTCCAAGGCCATCGA
GAAGACTGAGAAGAAGGCCGACGCGAAGGCTGCCGCCAGCGGCAAGTCGT
CCCCTACCCCCTCGGGTCGCTCCAGCCCCGGAAGATCCAGCCCTGCTCGC
GGCGAGGCTGCCAAGGCTGCTCGTAACGCCGACGCCGTCGCCATGGAGCA
ACAAGCCGATGTCGATGAGGCTACTTTGAAGGAAATCTACGGTGAGAAGA
AGGAGCACGTCAACATTGTCTTCATCGGTCACGTCGATGCCGGAAAGTCT
ACTTTGGGTGGATCCATCCTTTACGTGACCGGCATGGTGGACGAGCGTAC
TTTGGAGAAGTACAAGAGAGATGCCAAGGAGGCTGGTCGTGAGACCTGGT
ACCTCTCTTGGGCCTTGGATTTGACCAACGAGGAACGTGCCAAGGGTAAG
ACTGTTGAGGTTGGTCGTGCTCACTTCCAGCTCCCCGTCAAGGGAGCCGA
CGGCAGCACCATCACGAGACATTTCTCCATCCTGGATGCTCCTGGTCACA
AGTCTTATGTTCACCACATGATCGGTGGTGCTTCCCAGGCCGATGTTGGT
GTCCTTGTCATCTCCGCGCGTAAGGGTGAATACGAAACCGGTTTCGAGAA
GGGTGGTCAGACTCGTGAGCACGCCCTGCTTGCAAGAAACACCGGTGTGA
AGACCCTTATCGTCGCTGTCAACAAGATGGACGACCCTACCGTTGAGTGG
AGCAAGGCTCGTTTCGACGAGTGTACCGTCAAGGTGGGCAAGTACTTGGA
GAACCTCGGTTACAAGAAGAGCGATCTCTTCTTCATGCCCATCTCTGCCC
AGAGGACCACGGGTATCAAGGACCGCGTCCCCACGGACCTTGCTCCCTGG
TATGGCGGTCCCTCCCTTTTGGAGTTCCTGTCGGAGATGAAGGTGCCCGA
GCGTAAGATCAACGCACCTTTCATGATGCCCATCAGTGCCAAGTACCGTG
ACATGGGTACCATGGTCGAGGGTCGCATTGAGTCTGGTGTGCTTAAGAAG
AACGGCAGCTGCATCATGATGCCCAACCGCACCAAGGTCGAAATTGCCGC
TCTCTATGGTGAGACTGAAGACGAAATCCCCACCGCTACCTGCGGTGACC
AGGTCCGTCTTCGTCTCCGTGGTGTGGAAGAAGAAGATATCTTGCCCGGA
TTCGTGCTCTGCTCCCCCAAGCGTCTGGTGAACTGTGTCAAGACTTTCGA
GGCCAAGATCAGGATTCTTGACCTGAAGAGCATTCTCACGGCTGGTTACA
ACTGCGTGATGCACGTGCACTCTGCTGTCGAAGAAGTTACTGTTGCAGCA
CTTCTGCACAAGTGCGAGCCCGGCACTGGACGTCGGAGCAAGCGCCCCCC
TCCTTTCGCTAGCAAGGGTCAGACCATCATCGCTCGTCTCGAGGTGACGA
GCACTGCTGGTGCCGTTTGTGTCGAGCGCTTTGAGGACTACAACCAGATG
GGTCGGTTTACTCTGCGTGATCAGGTAAGCAGTCATTTCCAAAGTGCCAT
TATTGAACAATGCTAACATACACAAAACCAGGGTCAAACCGTTGCCATTG
GTATGATTACCAAGCTCATCTCTGCCGAAGAGGTGGCGCAGGCGCAGGCG
TAA
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Coding sequence (CDS) from alignment at ACJE01000019.1:1200870..1203122-

>ASPNIDRAFT_55985-T1 ID=ASPNIDRAFT_55985-T1|Name=ASPNIDRAFT_55985-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4368bp|location=Sequence derived from alignment at ACJE01000019.1:1200870..1203122- (Aspergillus niger ATCC 1015)
GGTCAAACCGTTGCCATTGGTATGATTACCAAGCTCATCTCTGCCGAAGA
GGTGGCGCAGGCGCAGGCGTAAATGGCCGACCAGACCCCCGATTCCTGGG
AGGATGAGCTCTCCAGACAGACTGAGGGCGTCCGTCTGAACCCCAACGCA
CAAGGCCGCCCTCAGCCTCAGGCTCCTTCTTTCCACCCTGGTGCTGCCAC
TTTCACCCCCGGCGCTGCTTCCTTCGTCCCTGGACAGGCCTACCAGCCCT
ACGGCGGCGGTTTCCCGCAATATGGCCAGTACGGCCAGCAGGCTTACGGT
GGATACCCTTATGACCAGCAGCAGCAGGCCTATGCCCAATACGGCGCCTA
CGCTCAGCAACCTGGTGGCTTTAACAACAACCAGATCTACAACCAGCAAT
ACGGTGGTTACCAGCAGCAGCAACAGCAGCCCCGTCAAGCTGCCGCCCCC
GCTGCCGCCCAGCCCGCTCAGCCCGCCCCGAAGCCTGCCGCAAGCAACGC
TGCTCCCCCCAAGGCCAAGGTCCTGTCTATTGGCGGCGCCAGCAACTCCC
CCGCCGCTCCCAAGACCAAGGTTCTTTCCATCGGCACCCCCTCCCCCGCT
CCCACCTCGAGCACGCCTTCTTCGACCTCCGGTGCCGCTACGCCTGGAGA
TACCAAGGGTGCTGCCGCTGTTGAGGCGGCCGCTAAGGTGACGGCTTCCA
AGGCCATCGAGAAGACTGAGAAGAAGGCCGACGCGAAGGCTGCCGCCAGC
GGCAAGTCGTCCCCTACCCCCTCGGGTCGCTCCAGCCCCGGAAGATCCAG
CCCTGCTCGCGGCGAGGCTGCCAAGGCTGCTCGTAACGCCGACGCCGTCG
CCATGGAGCAACAAGCCGATGTCGATGAGGCTACTTTGAAGGAAATCTAC
GGTGAGAAGAAGGAGCACGTCAACATTGTCTTCATCGGTCACGTCGATGC
CGGAAAGTCTACTTTGGGTGGATCCATCCTTTACGTGACCGGCATGGTGG
ACGAGCGTACTTTGGAGAAGTACAAGAGAGATGCCAAGGAGGCTGGTCGT
GAGACCTGGTACCTCTCTTGGGCCTTGGATTTGACCAACGAGGAACGTGC
CAAGGGTAAGACTGTTGAGGTTGGTCGTGCTCACTTCCAGCTCCCCGTCA
AGGGAGCCGACGGCAGCACCATCACGAGACATTTCTCCATCCTGGATGCT
CCTGGTCACAAGTCTTATGTTCACCACATGATCGGTGGTGCTTCCCAGGC
CGATGTTGGTGTCCTTGTCATCTCCGCGCGTAAGGGTGAATACGAAACCG
GTTTCGAGAAGGGTGGTCAGACTCGTGAGCACGCCCTGCTTGCAAGAAAC
ACCGGTGTGAAGACCCTTATCGTCGCTGTCAACAAGATGGACGACCCTAC
CGTTGAGTGGAGCAAGGCTCGTTTCGACGAGTGTACCGTCAAGGTGGGCA
AGTACTTGGAGAACCTCGGTTACAAGAAGAGCGATCTCTTCTTCATGCCC
ATCTCTGCCCAGAGGACCACGGGTATCAAGGACCGCGTCCCCACGGACCT
TGCTCCCTGGTATGGCGGTCCCTCCCTTTTGGAGTTCCTGTCGGAGATGA
AGGTGCCCGAGCGTAAGATCAACGCACCTTTCATGATGCCCATCAGTGCC
AAGTACCGTGACATGGGTACCATGGTCGAGGGTCGCATTGAGTCTGGTGT
GCTTAAGAAGAACGGCAGCTGCATCATGATGCCCAACCGCACCAAGGTCG
AAATTGCCGCTCTCTATGGTGAGACTGAAGACGAAATCCCCACCGCTACC
TGCGGTGACCAGGTCCGTCTTCGTCTCCGTGGTGTGGAAGAAGAAGATAT
CTTGCCCGGATTCGTGCTCTGCTCCCCCAAGCGTCTGGTGAACTGTGTCA
AGACTTTCGAGGCCAAGATCAGGATTCTTGACCTGAAGAGCATTCTCACG
GCTGGTTACAACTGCGTGATGCACGTGCACTCTGCTGTCGAAGAAGTTAC
TGTTGCAGCACTTCTGCACAAGTGCGAGCCCGGCACTGGACGTCGGAGCA
AGCGCCCCCCTCCTTTCGCTAGCAAGGGTCAGACCATCATCGCTCGTCTC
GAGGTGACGAGCACTGCTGGTGCCGTTTGTGTCGAGCGCTTTGAGGACTA
CAACCAGATGGGTCGGTTTACTCTGCGTGATCAGGGTCAAACCGTTGCCA
TTGGTATGATTACCAAGCTCATCTCTGCCGAAGAGGTGGCGCAGGCGCAG
GCGTAAATGGCCGACCAGACCCCCGATTCCTGGGAGGATGAGCTCTCCAG
ACAGACTGAGGGCGTCCGTCTGAACCCCAACGCACAAGGCCGCCCTCAGC
CTCAGGCTCCTTCTTTCCACCCTGGTGCTGCCACTTTCACCCCCGGCGCT
GCTTCCTTCGTCCCTGGACAGGCCTACCAGCCCTACGGCGGCGGTTTCCC
GCAATATGGCCAGTACGGCCAGCAGGCTTACGGTGGATACCCTTATGACC
AGCAGCAGCAGGCCTATGCCCAATACGGCGCCTACGCTCAGCAACCTGGT
GGCTTTAACAACAACCAGATCTACAACCAGCAATACGGTGGTTACCAGCA
GCAGCAACAGCAGCCCCGTCAAGCTGCCGCCCCCGCTGCCGCCCAGCCCG
CTCAGCCCGCCCCGAAGCCTGCCGCAAGCAACGCTGCTCCCCCCAAGGCC
AAGGTCCTGTCTATTGGCGGCGCCAGCAACTCCCCCGCCGCTCCCAAGAC
CAAGGTTCTTTCCATCGGCACCCCCTCCCCCGCTCCCACCTCGAGCACGC
CTTCTTCGACCTCCGGTGCCGCTACGCCTGGAGATACCAAGGGTGCTGCC
GCTGTTGAGGCGGCCGCTAAGGTGACGGCTTCCAAGGCCATCGAGAAGAC
TGAGAAGAAGGCCGACGCGAAGGCTGCCGCCAGCGGCAAGTCGTCCCCTA
CCCCCTCGGGTCGCTCCAGCCCCGGAAGATCCAGCCCTGCTCGCGGCGAG
GCTGCCAAGGCTGCTCGTAACGCCGACGCCGTCGCCATGGAGCAACAAGC
CGATGTCGATGAGGCTACTTTGAAGGAAATCTACGGTGAGAAGAAGGAGC
ACGTCAACATTGTCTTCATCGGTCACGTCGATGCCGGAAAGTCTACTTTG
GGTGGATCCATCCTTTACGTGACCGGCATGGTGGACGAGCGTACTTTGGA
GAAGTACAAGAGAGATGCCAAGGAGGCTGGTCGTGAGACCTGGTACCTCT
CTTGGGCCTTGGATTTGACCAACGAGGAACGTGCCAAGGGTAAGACTGTT
GAGGTTGGTCGTGCTCACTTCCAGCTCCCCGTCAAGGGAGCCGACGGCAG
CACCATCACGAGACATTTCTCCATCCTGGATGCTCCTGGTCACAAGTCTT
ATGTTCACCACATGATCGGTGGTGCTTCCCAGGCCGATGTTGGTGTCCTT
GTCATCTCCGCGCGTAAGGGTGAATACGAAACCGGTTTCGAGAAGGGTGG
TCAGACTCGTGAGCACGCCCTGCTTGCAAGAAACACCGGTGTGAAGACCC
TTATCGTCGCTGTCAACAAGATGGACGACCCTACCGTTGAGTGGAGCAAG
GCTCGTTTCGACGAGTGTACCGTCAAGGTGGGCAAGTACTTGGAGAACCT
CGGTTACAAGAAGAGCGATCTCTTCTTCATGCCCATCTCTGCCCAGAGGA
CCACGGGTATCAAGGACCGCGTCCCCACGGACCTTGCTCCCTGGTATGGC
GGTCCCTCCCTTTTGGAGTTCCTGTCGGAGATGAAGGTGCCCGAGCGTAA
GATCAACGCACCTTTCATGATGCCCATCAGTGCCAAGTACCGTGACATGG
GTACCATGGTCGAGGGTCGCATTGAGTCTGGTGTGCTTAAGAAGAACGGC
AGCTGCATCATGATGCCCAACCGCACCAAGGTCGAAATTGCCGCTCTCTA
TGGTGAGACTGAAGACGAAATCCCCACCGCTACCTGCGGTGACCAGGTCC
GTCTTCGTCTCCGTGGTGTGGAAGAAGAAGATATCTTGCCCGGATTCGTG
CTCTGCTCCCCCAAGCGTCTGGTGAACTGTGTCAAGACTTTCGAGGCCAA
GATCAGGATTCTTGACCTGAAGAGCATTCTCACGGCTGGTTACAACTGCG
TGATGCACGTGCACTCTGCTGTCGAAGAAGTTACTGTTGCAGCACTTCTG
CACAAGTGCGAGCCCGGCACTGGACGTCGGAGCAAGCGCCCCCCTCCTTT
CGCTAGCAAGGGTCAGACCATCATCGCTCGTCTCGAGGTGACGAGCACTG
CTGGTGCCGTTTGTGTCGAGCGCTTTGAGGACTACAACCAGATGGGTCGG
TTTACTCTGCGTGATCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
GO:0000288nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0003747translation release factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SUP35ASPNIDRAFT_55985Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55985-T1ASPNIDRAFT_55985-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55985-T1.cdsASPNIDRAFT_55985-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55985-T1.exon2ASPNIDRAFT_55985-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55985-T1.exon1ASPNIDRAFT_55985-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55985-T1.utr5p1ASPNIDRAFT_55985-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261PUF
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR004160
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR000795
DBxrefInterPro:IPR003285
DBxrefPFAM:PF03143
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
Producttranslation termination factor GTPase eRF3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1200870..1203122 -
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