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ASPNIDRAFT_56084-T1, ASPNIDRAFT_56084-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56084-T1
Unique NameASPNIDRAFT_56084-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2680963..2682016+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56084-T1 ID=ASPNIDRAFT_56084-T1|Name=ASPNIDRAFT_56084-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1054bp|location=Sequence derived from alignment at ACJE01000019.1:2680963..2682016+ (Aspergillus niger ATCC 1015)
ATGGGCGACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCA
GGAATTCAACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAG
AAGCCTACGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGC
GTCGCTAACCGCATCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCA
ATATCAACTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTC
GTGGATGGGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGAT
GGAAAGACCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGG
ATACCCAGGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGG
TGGAGAATGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAG
TTGGTGGGCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAG
GTATGTCTGTCACATTTAATCTAAATCACTGAAGCGATAGGATACTGATT
ATCTCAAACAGCTACTTCAACCTCAACGGTGGCCCAACCACCGAAGGCAC
CATCACCAAACTATCAACACAGGACTACCTACCCCTAGAGAACGGCATCC
CATTGGGCCCCATTGAGCCCTACCCCAGCGAAGTCACCAAGGAATTCACC
TTCGGCCCGCAGAACCAATTCGACGACGTCTTCGTTATGGACCGCGACCT
GTCCCGCGTTCCCCTCGATACGCGGGGTGAGCCCCTCCGCCTGCTGGCCG
AGTTCCAGCACCCAGACACGCGTCTGCACCTGCAAGTGCACAGCACGGAG
CCGGCCTTCCAATTCTACACGGGCCAAGGCATCGACGTACCCGAGACAGA
CGGGAAACCGAGTCGGGGCCCATTTGCGGGGTTCTGCATCGAACCCAGTC
GGTTTGTCAATGCGGTCAATGAGCCCGGATGGCGGCACACGGTCATTCTC
CCGAAGGGGAAGAAGTACGGTAGTACAATTGTGTATAAGGCCTGGAGGGA
GTAG
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Coding sequence (CDS) from alignment at ACJE01000019.1:2680963..2682016+

>ASPNIDRAFT_56084-T1 ID=ASPNIDRAFT_56084-T1|Name=ASPNIDRAFT_56084-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1986bp|location=Sequence derived from alignment at ACJE01000019.1:2680963..2682016+ (Aspergillus niger ATCC 1015)
ATGGGCGACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCA
GGAATTCAACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAG
AAGCCTACGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGC
GTCGCTAACCGCATCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCA
ATATCAACTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTC
GTGGATGGGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGAT
GGAAAGACCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGG
ATACCCAGGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGG
TGGAGAATGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAG
TTGGTGGGCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAG
CTACTTCAACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCAAAC
TATCAACACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGCCCC
ATTGAGCCCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCCGCA
GAACCAATTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCGTTC
CCCTCGATACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAGCAC
CCAGACACGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTTCCA
ATTCTACACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAACCGA
GTCGGGGCCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTCAAT
GCGGTCAATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGGGAA
GAAGTACGGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAGATGGGCG
ACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCAGGAATTC
AACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAGAAGCCTA
CGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGCGTCGCTA
ACCGCATCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCAATATCAA
CTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTCGTGGATG
GGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGATGGAAAGA
CCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGGATACCCA
GGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGGTGGAGAA
TGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAGTTGGTGG
GCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAGCTACTTC
AACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCAAACTATCAAC
ACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGCCCCATTGAGC
CCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCCGCAGAACCAA
TTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCGTTCCCCTCGA
TACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAGCACCCAGACA
CGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTTCCAATTCTAC
ACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAACCGAGTCGGGG
CCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTCAATGCGGTCA
ATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGGGAAGAAGTAC
GGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030246carbohydrate binding
GO:0016853isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56084ASPNIDRAFT_56084Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56084-T1.exon1ASPNIDRAFT_56084-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56084-T1.exon2ASPNIDRAFT_56084-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56084-T1.cdsASPNIDRAFT_56084-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56084-T1ASPNIDRAFT_56084-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR018052
DBxrefInterPro:IPR014718
DBxrefInterPro:IPR008183
DBxrefPFAM:PF01263
Productaldose 1-epimerase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2680963..2682016 +
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