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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:810939..812021- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_56225-T1 ID=ASPNIDRAFT_56225-T1|Name=ASPNIDRAFT_56225-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1083bp|location=Sequence derived from alignment at ACJE01000009.1:810939..812021- (Aspergillus niger ATCC 1015)
CTCTCATCTTCACCTCGTTCTCCTGCCTTCTCCTCAAGAATTCTCTTTCT
TTACTCCCCTCTCCGACCAATAGACCCAGTAATGGCTGCCAACCCTGTGG
AAAATGGACTATTTGTCCATAACAACACTACCGCTCCAGCCCACCCCGGC
TTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGCCATCGTTACCGGCGC
CGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCCTGGCTGAAGCTGGTG
CAAATGTGGCCTTGTGGTATAGCAGCAACCCCAACTGCATCGAGCGGGCC
GCGGAAATTGCCTCCAAGTATGGTGTCCAGGGTCAGTAGCCCTCAAACCA
TTTTCCCCACTTACCGTCAGACATACTTTACTAACGCTCAATCTAGCCCA
GGCGTACAAGGTCGAAATCACCAAGCCCGAAGCCGTGCAGGCGGCCGTTG
ACCAGGTTGTGAAAGACTTCAATGGCCGACTAGACGTTTTCATCGCCAAT
GCCGGTATCCCCTGGACTAAAGGTCCCATGGTTGACGGTCCACTGGACCA
CTACTCGAGTGTTGTCGACGTCGACCTGAACGGAACTTTCTACTGCGCCA
GGGCAGCGGCAACCCACTGGAGGAGACAAAAGGAGGAGGGCACCGATATC
AATGGTAACGCGCTCAACAACTTCACCTATGGCAGCTTTGTGGCCACCGC
TTCCATGAGCGGTCACATTGTCAACTTCCCTCAGATGCAGGCAGCATACA
ACGCCTCCAAAGCGGGTGTCATCCATCTTTGTAAGTGGAATAACCTTGTA
GGCATAGACTTGCACTGTACTAATCCCCTATGCAGGCAAGTCGCTGGCTG
TCGAGTGGGTTAAGTTTGCGCGTGCCAACACCGTTTCTCCCGGATACATT
GCGACAGAGATCTCGAATTTCATCCCAGATGATGTCAAGGGCATCTGGAA
GGACAAGATTCCCATGGGTCGCGAGGGAGAACCCGAGGAGCTGAAGGGCG
CGTATCTGTACCTGGCATCGGATGCATCCAGCTACACCACTGGAGCAGAC
ATTGTGGTTGACGGCGGCTACTGCGCCCCGTAG back to topCoding sequence (CDS) from alignment at ACJE01000009.1:810939..812021- >ASPNIDRAFT_56225-T1 ID=ASPNIDRAFT_56225-T1|Name=ASPNIDRAFT_56225-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2646bp|location=Sequence derived from alignment at ACJE01000009.1:810939..812021- (Aspergillus niger ATCC 1015)
GCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGCGTGCCAACACCGTT
TCTCCCGGATACATTGCGACAGAGATCTCGAATTTCATCCCAGATGATGT
CAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCGCGAGGGAGAACCCG
AGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGGATGCATCCAGCTAC
ACCACTGGAGCAGACATTGTGGTTGACGGCGGCTACTGCGCCCCGTAGCC
CAGGCGTACAAGGTCGAAATCACCAAGCCCGAAGCCGTGCAGGCGGCCGT
TGACCAGGTTGTGAAAGACTTCAATGGCCGACTAGACGTTTTCATCGCCA
ATGCCGGTATCCCCTGGACTAAAGGTCCCATGGTTGACGGTCCACTGGAC
CACTACTCGAGTGTTGTCGACGTCGACCTGAACGGAACTTTCTACTGCGC
CAGGGCAGCGGCAACCCACTGGAGGAGACAAAAGGAGGAGGGCACCGATA
TCAATGGTAACGCGCTCAACAACTTCACCTATGGCAGCTTTGTGGCCACC
GCTTCCATGAGCGGTCACATTGTCAACTTCCCTCAGATGCAGGCAGCATA
CAACGCCTCCAAAGCGGGTGTCATCCATCTTTATGGCTGCCAACCCTGTG
GAAAATGGACTATTTGTCCATAACAACACTACCGCTCCAGCCCACCCCGG
CTTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGCCATCGTTACCGGCG
CCGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCCTGGCTGAAGCTGGT
GCAAATGTGGCCTTGTGGTATAGCAGCAACCCCAACTGCATCGAGCGGGC
CGCGGAAATTGCCTCCAAGTATGGTGTCCAGGGCAAGTCGCTGGCTGTCG
AGTGGGTTAAGTTTGCGCGTGCCAACACCGTTTCTCCCGGATACATTGCG
ACAGAGATCTCGAATTTCATCCCAGATGATGTCAAGGGCATCTGGAAGGA
CAAGATTCCCATGGGTCGCGAGGGAGAACCCGAGGAGCTGAAGGGCGCGT
ATCTGTACCTGGCATCGGATGCATCCAGCTACACCACTGGAGCAGACATT
GTGGTTGACGGCGGCTACTGCGCCCCGTAGCCCAGGCGTACAAGGTCGAA
ATCACCAAGCCCGAAGCCGTGCAGGCGGCCGTTGACCAGGTTGTGAAAGA
CTTCAATGGCCGACTAGACGTTTTCATCGCCAATGCCGGTATCCCCTGGA
CTAAAGGTCCCATGGTTGACGGTCCACTGGACCACTACTCGAGTGTTGTC
GACGTCGACCTGAACGGAACTTTCTACTGCGCCAGGGCAGCGGCAACCCA
CTGGAGGAGACAAAAGGAGGAGGGCACCGATATCAATGGTAACGCGCTCA
ACAACTTCACCTATGGCAGCTTTGTGGCCACCGCTTCCATGAGCGGTCAC
ATTGTCAACTTCCCTCAGATGCAGGCAGCATACAACGCCTCCAAAGCGGG
TGTCATCCATCTTTATGGCTGCCAACCCTGTGGAAAATGGACTATTTGTC
CATAACAACACTACCGCTCCAGCCCACCCCGGCTTGCTGAGCATGTTCTC
ACTGAAGGGCAAGACTGCCATCGTTACCGGCGCCGGTGCTGGCATCGGCC
TTTCCGTAGCTATTGGCCTGGCTGAAGCTGGTGCAAATGTGGCCTTGTGG
TATAGCAGCAACCCCAACTGCATCGAGCGGGCCGCGGAAATTGCCTCCAA
GTATGGTGTCCAGGGCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGC
GTGCCAACACCGTTTCTCCCGGATACATTGCGACAGAGATCTCGAATTTC
ATCCCAGATGATGTCAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCG
CGAGGGAGAACCCGAGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGG
ATGCATCCAGCTACACCACTGGAGCAGACATTGTGGTTGACGGCGGCTAC
TGCGCCCCGTAGCCCAGGCGTACAAGGTCGAAATCACCAAGCCCGAAGCC
GTGCAGGCGGCCGTTGACCAGGTTGTGAAAGACTTCAATGGCCGACTAGA
CGTTTTCATCGCCAATGCCGGTATCCCCTGGACTAAAGGTCCCATGGTTG
ACGGTCCACTGGACCACTACTCGAGTGTTGTCGACGTCGACCTGAACGGA
ACTTTCTACTGCGCCAGGGCAGCGGCAACCCACTGGAGGAGACAAAAGGA
GGAGGGCACCGATATCAATGGTAACGCGCTCAACAACTTCACCTATGGCA
GCTTTGTGGCCACCGCTTCCATGAGCGGTCACATTGTCAACTTCCCTCAG
ATGCAGGCAGCATACAACGCCTCCAAAGCGGGTGTCATCCATCTTTATGG
CTGCCAACCCTGTGGAAAATGGACTATTTGTCCATAACAACACTACCGCT
CCAGCCCACCCCGGCTTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGC
CATCGTTACCGGCGCCGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCC
TGGCTGAAGCTGGTGCAAATGTGGCCTTGTGGTATAGCAGCAACCCCAAC
TGCATCGAGCGGGCCGCGGAAATTGCCTCCAAGTATGGTGTCCAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | L-xylulose reductase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:810939..812021 - |
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