You are here

Home

ASPNIDRAFT_56275-T1, ASPNIDRAFT_56275-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56275-T1
Unique NameASPNIDRAFT_56275-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:109290..111999+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56275-T1 ID=ASPNIDRAFT_56275-T1|Name=ASPNIDRAFT_56275-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2710bp|location=Sequence derived from alignment at ACJE01000008.1:109290..111999+ (Aspergillus niger ATCC 1015)
CTCCGTCTTTTACCCCAGAATCCTCCGATAGCGGAGCAAGACATAATGCG
TGCCGTGTGATTGGTCGATCATTCGGGTCTGGGTCCGCGTCGGGGCTTCC
CTTTAGTTTGCCTTCAAGTGTGAACTTTGAGTCACTCAACTTTCTCCCAT
TTTCTTTCTTTGCTCTGTCCTTCCCCCATCCTTGACGCTTCTGTCTGAAG
ATGCAGTCGCGTTTGTTGCCCTCCGGCCCTGGCAGGCGCTGGATTTCTCT
TCGCGTGCCGAACACGCCTCAACGACGTGCCTTCGCCTCCACCCGCTTCC
TTTTCCAGGATGTCTTCCAGTCCCAGCTGGACGACCCTTCCTCCGCCGCC
CTCTTCTCCTCCCTGCAGTCCTCCCGGGCCGTGCCCCAGACCTTGACGGA
AAAGATCGTTCAGAAGTACGCCGTAGGTCTGCCCGATGGCAAGTTTGTCA
AGTCCGGCGACTATGTGACTATCGCTCCCCACCGGATTATGACCCATGAC
AACTCTTGGCCCGTCGCATTGAAGTTCATGTCGATCGGTGCCTCCAAGAT
GCACGATCCCAATCAGGTCGTGATGACTCTCGACCATGATGTCCAGAACA
AAACAGAGAAGAACCTGCAAAAGTACCGCCAGATCGAGGAGTTTGCCAAG
CAACACGGTGTCGAGTTCTATCCCGCCGGTCGAGGAATTGGTCACCAAAT
CATGGTTGAAGAAGGCTTTGCCTGGCCCGGCACTCTGGTGGTCGCCTCGG
ACAGTCACAGTAACACTTATGGTGCCGTGGCCTCCGTTGGAACTCCCATC
GTGAGAACCGATGCGGCCAGTATCTGGGCGACCGGTAAGACGTGGTGGCA
GATCCCCCCAGTGGCCAAGGTGACTTTTACCGGTATCCTGCCCCCTGGCG
TGACTGGCAAGGACGTCATCGTTGCTCTGTGCGGTCTATTCGACAAGGAC
GATGTCCTGAACCATGCAATTGAGTTCACTGGCTCTGAGGAAACCATGAG
AAGCTTGCCCATGGATAGCCGGTTGACCATTGCCAACATGACGACTGAGT
GGGGTGCTTTGTCAGGACTGTTCCCCATGGATGGTGTTCTGAAAGGCTGG
TTGAAGGGCAAGGCTACCACTGCGGCCATGGGCTTGGCTGATGGGCCGTT
CAAGACCCTGGCTGCTCGCAACTTCACCCACCCTGCCATCGAGCAGCTTT
TTGTGAACCCTCTCACTGCCGATAAGGGTGCCAAATATGCGAAGGAGCTC
TTCCTGGACCTTTCGACTCTTTCTCCCTACGTTTCCGGCCCCAACTCGGT
CAAGATTGCCACCCCCCTCAAGGAGCTGGAAGCCCAGGATATCAAGGTCG
ACAAGGCCTATCTGGTTTCCTGCACCAACTCTCGGGCTTCGGACATTGCT
GCTGCTGCTAAGGTGTTCAAGGATGCCGCGGAGAAGAACGGTGGGAAGGT
CCCGAAGATCGCTGATGGCGTCAAGTTTTACATTGCTGCCGCGTCCATTC
CCGAACAGCTCGCTGCGGAAGGAGCTGGTGACTGGCAGACCCTCCTGGAG
GCTGGAGCAACGGCCCTCCCCGCTGGATGCGGACCTTGCATCGGTCTGGG
AACGGGATTGCTGGAGCCCGGCGAGGTCGGCATCAGTGCGTCGAACCGCA
ACTTCAAGGGTCGCATGGGTAGCACTGAAGCCAAGGCATACTTGGGTAGC
CCCGAAATTGTTGCTGCCAGCGCCCTCAGCGGCAAGCTGAGCGGCCCTGG
CTGGTACCAGCCCCCTGAAGGGTGGACCGAAGTTGTCCGCGGTGAGGGCG
ATGGTATCCGCGAGGAGGACCGCATGCTCAATACCGAGCAAGCTCTTGAG
AAGCTCCTTGGTCAGTTGGATGACCTTGTTGCCGATGGGGAGAAGCGCTT
CGCTCCGGAGGAGAAGGTTGAGGAAGAGGGTGGCCTGACGGAGGTGTATC
CTGGTTTCCCTGAACGCGTCTCTGGCGAGATTGTGTTCTGTGATGCTGAC
AACCTGAACACGGACGCCATCTATCCCGGTTACTGGACCTACCAAGACAA
TGTCCCCGTGGAGAAGATGGCTGAAGTATGCATGTCCAACTACGATAAGG
AGTTCGCCTCCATTGCCAAGGAGGGTGACATCCTGGTTGTCGGATACAAC
TTCGGCTGTGGTAGCTCTCGTGAACAGGCGGCCACTGCTCTCTTGGCGAA
GCAGATTCCCCTGGTTGTTTCGGGTAGCTTTGGCAACATCTTCTCCCGGA
ACAGCATTAACAATGCTCTCATGGGTCTGGAGGTCCCTCGCTTGGTTAGC
CGTCTGCGCGAGGAGTTTGGCGACAAGCAGCTTACCCGTCGGACCGGTTG
GACCCTGACCTGGGATGTCCGGCGCAGTCAGATTGAGATCCAGGAAGGCC
AGAACGGACCCAAGTGGACTCACAAGGTGGGCGAGCTGCCGCCCAACGTG
CAGGAGATCATTGCGAAGGGTGGTCTGGAGAAATGGGTCAAGAACGCCAT
TGAGGCGTAGAGCAAGTGGTTCAGCAGAAATGAAACGCGCATGACTGTCG
ACAAAGTGATTCTTATGATACCCAAGCCTTCCAGTCTTCGTTATGGGGTT
GCGGCGTGGATGTTTCTTGGATAGAGACGATACGCATGGAAAAAAATATC
AAACTCAAGAGATGACTCTGCATGTATAGAAAGGAAAGAGATTTCCCTTA
TTAGATGTAC
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:109290..111999+

>ASPNIDRAFT_56275-T1 ID=ASPNIDRAFT_56275-T1|Name=ASPNIDRAFT_56275-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2310bp|location=Sequence derived from alignment at ACJE01000008.1:109290..111999+ (Aspergillus niger ATCC 1015)
ATGCAGTCGCGTTTGTTGCCCTCCGGCCCTGGCAGGCGCTGGATTTCTCT
TCGCGTGCCGAACACGCCTCAACGACGTGCCTTCGCCTCCACCCGCTTCC
TTTTCCAGGATGTCTTCCAGTCCCAGCTGGACGACCCTTCCTCCGCCGCC
CTCTTCTCCTCCCTGCAGTCCTCCCGGGCCGTGCCCCAGACCTTGACGGA
AAAGATCGTTCAGAAGTACGCCGTAGGTCTGCCCGATGGCAAGTTTGTCA
AGTCCGGCGACTATGTGACTATCGCTCCCCACCGGATTATGACCCATGAC
AACTCTTGGCCCGTCGCATTGAAGTTCATGTCGATCGGTGCCTCCAAGAT
GCACGATCCCAATCAGGTCGTGATGACTCTCGACCATGATGTCCAGAACA
AAACAGAGAAGAACCTGCAAAAGTACCGCCAGATCGAGGAGTTTGCCAAG
CAACACGGTGTCGAGTTCTATCCCGCCGGTCGAGGAATTGGTCACCAAAT
CATGGTTGAAGAAGGCTTTGCCTGGCCCGGCACTCTGGTGGTCGCCTCGG
ACAGTCACAGTAACACTTATGGTGCCGTGGCCTCCGTTGGAACTCCCATC
GTGAGAACCGATGCGGCCAGTATCTGGGCGACCGGTAAGACGTGGTGGCA
GATCCCCCCAGTGGCCAAGGTGACTTTTACCGGTATCCTGCCCCCTGGCG
TGACTGGCAAGGACGTCATCGTTGCTCTGTGCGGTCTATTCGACAAGGAC
GATGTCCTGAACCATGCAATTGAGTTCACTGGCTCTGAGGAAACCATGAG
AAGCTTGCCCATGGATAGCCGGTTGACCATTGCCAACATGACGACTGAGT
GGGGTGCTTTGTCAGGACTGTTCCCCATGGATGGTGTTCTGAAAGGCTGG
TTGAAGGGCAAGGCTACCACTGCGGCCATGGGCTTGGCTGATGGGCCGTT
CAAGACCCTGGCTGCTCGCAACTTCACCCACCCTGCCATCGAGCAGCTTT
TTGTGAACCCTCTCACTGCCGATAAGGGTGCCAAATATGCGAAGGAGCTC
TTCCTGGACCTTTCGACTCTTTCTCCCTACGTTTCCGGCCCCAACTCGGT
CAAGATTGCCACCCCCCTCAAGGAGCTGGAAGCCCAGGATATCAAGGTCG
ACAAGGCCTATCTGGTTTCCTGCACCAACTCTCGGGCTTCGGACATTGCT
GCTGCTGCTAAGGTGTTCAAGGATGCCGCGGAGAAGAACGGTGGGAAGGT
CCCGAAGATCGCTGATGGCGTCAAGTTTTACATTGCTGCCGCGTCCATTC
CCGAACAGCTCGCTGCGGAAGGAGCTGGTGACTGGCAGACCCTCCTGGAG
GCTGGAGCAACGGCCCTCCCCGCTGGATGCGGACCTTGCATCGGTCTGGG
AACGGGATTGCTGGAGCCCGGCGAGGTCGGCATCAGTGCGTCGAACCGCA
ACTTCAAGGGTCGCATGGGTAGCACTGAAGCCAAGGCATACTTGGGTAGC
CCCGAAATTGTTGCTGCCAGCGCCCTCAGCGGCAAGCTGAGCGGCCCTGG
CTGGTACCAGCCCCCTGAAGGGTGGACCGAAGTTGTCCGCGGTGAGGGCG
ATGGTATCCGCGAGGAGGACCGCATGCTCAATACCGAGCAAGCTCTTGAG
AAGCTCCTTGGTCAGTTGGATGACCTTGTTGCCGATGGGGAGAAGCGCTT
CGCTCCGGAGGAGAAGGTTGAGGAAGAGGGTGGCCTGACGGAGGTGTATC
CTGGTTTCCCTGAACGCGTCTCTGGCGAGATTGTGTTCTGTGATGCTGAC
AACCTGAACACGGACGCCATCTATCCCGGTTACTGGACCTACCAAGACAA
TGTCCCCGTGGAGAAGATGGCTGAAGTATGCATGTCCAACTACGATAAGG
AGTTCGCCTCCATTGCCAAGGAGGGTGACATCCTGGTTGTCGGATACAAC
TTCGGCTGTGGTAGCTCTCGTGAACAGGCGGCCACTGCTCTCTTGGCGAA
GCAGATTCCCCTGGTTGTTTCGGGTAGCTTTGGCAACATCTTCTCCCGGA
ACAGCATTAACAATGCTCTCATGGGTCTGGAGGTCCCTCGCTTGGTTAGC
CGTCTGCGCGAGGAGTTTGGCGACAAGCAGCTTACCCGTCGGACCGGTTG
GACCCTGACCTGGGATGTCCGGCGCAGTCAGATTGAGATCCAGGAAGGCC
AGAACGGACCCAAGTGGACTCACAAGGTGGGCGAGCTGCCGCCCAACGTG
CAGGAGATCATTGCGAAGGGTGGTCTGGAGAAATGGGTCAAGAACGCCAT
TGAGGCGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009085lysine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004409homoaconitate hydratase activity
GO:00515394 iron, 4 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56275ASPNIDRAFT_56275Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56275-T1.utr5p1ASPNIDRAFT_56275-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56275-T1.exon1ASPNIDRAFT_56275-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56275-T1.cdsASPNIDRAFT_56275-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56275-T1.utr3p1ASPNIDRAFT_56275-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56275-T1ASPNIDRAFT_56275-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036008
DBxrefInterPro:IPR039386
DBxrefInterPro:IPR018136
DBxrefInterPro:IPR015928
DBxrefInterPro:IPR000573
DBxrefInterPro:IPR004418
DBxrefInterPro:IPR015931
DBxrefInterPro:IPR001030
DBxrefPFAM:PF00694
DBxrefPFAM:PF00330
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:109290..111999 +
Powered by Drupal