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ASPNIDRAFT_56424-T1, ASPNIDRAFT_56424-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56424-T1
Unique NameASPNIDRAFT_56424-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1308527..1309469-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56424-T1 ID=ASPNIDRAFT_56424-T1|Name=ASPNIDRAFT_56424-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=943bp|location=Sequence derived from alignment at ACJE01000013.1:1308527..1309469- (Aspergillus niger ATCC 1015)
ATGGGCGCCGCCGAAAACAAATACTCGGTCATCCTGCCGACCTACAACGA
GCGCAAGAACCTCCCTATCATCGTCTGGCTCCTGGAGCGGACCTTTCGCG
AGAAGTACACACACCTCTCCATCACCTCCCTCCCCCCATCCCCCCAATCC
CATTACTAACGAAAAGACAAACGATAGCAACCTAAACTGGGAAATCATCA
TCGTTGACGACGGCAGCCCGGACGGCACTCTGGACATCGCGCGCCAACTC
CAAAAGCACTACGGCAGCAACCACATCCTGCTCCACCCCCGAGCGGGCAA
ACTCGGCCTGGGAACGGCGTACATCCACGGCCTTCAATTCACAACAGGCA
ACTACGTCATCATCATGGACGCGGACTTCAGCCACCACCCGAAATTCATC
CCGGAGATGATTCGCATCCAGAAGCTAGGGGACGCAGACATCGTGACGGG
CACACGGTACGCCAGTCGCGATGGCATTAAGGGTGGTGTGTACGGATGGG
ACCTGTTCAGGAAGTTTACCTCCCGCACGGCGAATCTCATTGCGGATGTG
ATGTTGATGCCTGGGGTGAGTGATCTTACGGGAAGCTTTCGCTTGTATAA
GAAGAGTGTGCTGGAGAAGGTCATTCATAGTACACAGAGTAAGGGGTATA
GTTTTCAGATGGAGATGATGGTTCGGGCTAAGGCCATGGGGTTCAGGGTT
GCGGAGTGTCCGATTACGTTTGTGGATCGGTTGTATGGGGAGAGTAAGTT
GGGCGGTCATGAGATTGTGGAGTATTTGAAGGGGGTAGTGAATCTTTGGT
TGAAGGTTTGAAATGATTTACTATTAAGAGGATGTTGGGGGTTGGTGTGG
GTGGTTTCTTTTATACCCTCTTTTTTTCTTTTATATAACTTTGAGTGCTC
TGTATAGTATTTACTGGGTTCAATGCATGTCGGTCTGCTGTCG
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Coding sequence (CDS) from alignment at ACJE01000013.1:1308527..1309469-

>ASPNIDRAFT_56424-T1 ID=ASPNIDRAFT_56424-T1|Name=ASPNIDRAFT_56424-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1476bp|location=Sequence derived from alignment at ACJE01000013.1:1308527..1309469- (Aspergillus niger ATCC 1015)
CAACCTAAACTGGGAAATCATCATCGTTGACGACGGCAGCCCGGACGGCA
CTCTGGACATCGCGCGCCAACTCCAAAAGCACTACGGCAGCAACCACATC
CTGCTCCACCCCCGAGCGGGCAAACTCGGCCTGGGAACGGCGTACATCCA
CGGCCTTCAATTCACAACAGGCAACTACGTCATCATCATGGACGCGGACT
TCAGCCACCACCCGAAATTCATCCCGGAGATGATTCGCATCCAGAAGCTA
GGGGACGCAGACATCGTGACGGGCACACGGTACGCCAGTCGCGATGGCAT
TAAGGGTGGTGTGTACGGATGGGACCTGTTCAGGAAGTTTACCTCCCGCA
CGGCGAATCTCATTGCGGATGTGATGTTGATGCCTGGGGTGAGTGATCTT
ACGGGAAGCTTTCGCTTGTATAAGAAGAGTGTGCTGGAGAAGGTCATTCA
TAGTACACAGAGTAAGGGGTATAGTTTTCAGATGGAGATGATGGTTCGGG
CTAAGGCCATGGGGTTCAGGGTTGCGGAGTGTCCGATTACGTTTGTGGAT
CGGTTGTATGGGGAGAGTAAGTTGGGCGGTCATGAGATTGTGGAGTATTT
GAAGGGGGTAGTGAATCTTTGGTTGAAGGTTTGAATGGGCGCCGCCGAAA
ACAAATACTCGGTCATCCTGCCGACCTACAACGAGCGCAAGAACCTCCCT
ATCATCGTCTGGCTCCTGGAGCGGACCTTTCGCGAGAACAACCTAAACTG
GGAAATCATCATCGTTGACGACGGCAGCCCGGACGGCACTCTGGACATCG
CGCGCCAACTCCAAAAGCACTACGGCAGCAACCACATCCTGCTCCACCCC
CGAGCGGGCAAACTCGGCCTGGGAACGGCGTACATCCACGGCCTTCAATT
CACAACAGGCAACTACGTCATCATCATGGACGCGGACTTCAGCCACCACC
CGAAATTCATCCCGGAGATGATTCGCATCCAGAAGCTAGGGGACGCAGAC
ATCGTGACGGGCACACGGTACGCCAGTCGCGATGGCATTAAGGGTGGTGT
GTACGGATGGGACCTGTTCAGGAAGTTTACCTCCCGCACGGCGAATCTCA
TTGCGGATGTGATGTTGATGCCTGGGGTGAGTGATCTTACGGGAAGCTTT
CGCTTGTATAAGAAGAGTGTGCTGGAGAAGGTCATTCATAGTACACAGAG
TAAGGGGTATAGTTTTCAGATGGAGATGATGGTTCGGGCTAAGGCCATGG
GGTTCAGGGTTGCGGAGTGTCCGATTACGTTTGTGGATCGGTTGTATGGG
GAGAGTAAGTTGGGCGGTCATGAGATTGTGGAGTATTTGAAGGGGGTAGT
GAATCTTTGGTTGAAGGTTTGAATGGGCGCCGCCGAAAACAAATACTCGG
TCATCCTGCCGACCTACAACGAGCGCAAGAACCTCCCTATCATCGTCTGG
CTCCTGGAGCGGACCTTTCGCGAGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DPM1ASPNIDRAFT_56424Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56424-T1ASPNIDRAFT_56424-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56424-T1.cdsASPNIDRAFT_56424-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56424-T1.utr3p1ASPNIDRAFT_56424-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56424-T1.exon2ASPNIDRAFT_56424-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56424-T1.exon1ASPNIDRAFT_56424-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09264272
NoteCAZy:GT2_Glycos_transf_2
DBxrefInterPro:IPR039528
DBxrefInterPro:IPR001173
DBxrefInterPro:IPR029044
DBxrefPFAM:PF13641
DBxrefPFAM:PF00535
Productdolichol-P-mannose synthesis
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1308527..1309469 -
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