You are here

Home

ASPNIDRAFT_56436-T1, ASPNIDRAFT_56436-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56436-T1
Unique NameASPNIDRAFT_56436-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1184166..1186667-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56436-T1 ID=ASPNIDRAFT_56436-T1|Name=ASPNIDRAFT_56436-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2502bp|location=Sequence derived from alignment at ACJE01000013.1:1184166..1186667- (Aspergillus niger ATCC 1015)
CTGCCGCTCTCCTTCTCCCGCTCAACCGGCTCTCCGTTACCTTCTAACCC
TCTTCCAGTCCCGATTGTGTGTGTGTCTCCGCGCGCGCGAAGGCCAGCTT
CCATCTGAGAGCTACTGGTTGTCTGGTTCAGCTGTCCCCTCAGCGTACCA
AACTATCCTCTCCTTGCTTCCCTAATCAATCAGGCCCACCGTTACCTTCT
GGAACCGTTCTATGGTCCTCGCATTCCCCGGATAAACACCAGGAACTATC
TCTCTGCTGAATACCACCGCCATCCAACTGCCAGCGTTAAATTGCCCAGG
ATAACGACCCGTTTGACCCCTCAAGGATCCGTTTCCATTTCAGTCGCCTG
TACCATCACTGAATCAAAATCTTCTTGTTTGGGCCACATTCCCGCAAGGC
CAGAAGTATTGCGATTGCGATTTGCTTGTTAGTCCGCCTGGACGGATTTC
GCCTCGACCAATTGTGTGTGCTGTGCTAGTCTTACCTCTTTCACCATCTA
CTATCCGCCATGACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCT
CCCCCGCAATGGTATGAAGCCATCTACAAAGTCTCCTTAGGTCTCCTTGT
TTTCTCTTCAACCCGCTCTGGATGTTACCCTTCTTGTCCACCTCTATCTT
CGACACAAAGATCGGGATGTTCCGCTGGATCGTCATGCGTCTGGATTGAC
CTCCCTGAGTCACCGAGATTCCCCCTCCCCTCGGGAGATTGACGGCGGAT
TTTCCTTCATTTTGTTTCAATCTTCCTTGCTTGTATCACGGTAATCTCAG
TGTTCCGGATACCGGGTTGGCAGCTTCGAACTCAAAAATCAAGTTGTCTC
GGTTGTTTGTTCCTTCAAGTCCATTCGCAGTAAGCTGACATTTTACTCAC
GGCGCCCCTGTTGGGCGCCATTAGTGGGGTTTCTTTTACAGTGACCAAAC
AGGATATCGAGGAGCATTTCAGCACCCATGGTTCCGGAAAGATTACAGAG
ATCAAGCTCATGAATGGCTTCGGTTTCATTGAATATGAGGACGCGATGGA
TGCTAGAGATGTTGTACCCGGTAAGTCACCCTATTATGCGCCCTAGCTGT
CGCGGGAGCCTGCTAACGTAGGACGATTATCTAGCCTTCCGTATGTACCA
ACGCAAGCACCAGTTTGAAAGATCTTCATGGTTGACATAACCCCTCATGC
AGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCCGTG
GACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCCAATATG
CCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACTCCCGGA
AACAAGTTGGCAGGTTAGCAGCCCAAGTCCCCTTTCTTCTGGATCCACCG
GACGCCTTGCATCTCGGCCGATTTGCGTTCCCTGATTCATTTTTGCCCTG
TACTCCATTCTATGTTCTTCCACCGACGGCCCAAGGGAATCCTGGCGACG
ATGATCAGCTCCTCTTGATGTATGGGTCGTTCACCAACCAACTTTCGGAC
CCCACCTAACTGAAAGGAAGGCTGGATGGCTGCCTCCCATGATCGAACCC
CAGCTCTGAGTGCTGAGAACCGAGGCCGGACAACCCCGTCCAGAATGGAA
CGGCCCCGCAGTCATTGAAGGATCCCTTCGCCTACTACCCTGCATTGCTT
GGGTCCTTTCCTGGCCTGTTTTTCCATCTTGTATTTTTCTACTTGCGGGC
ACCCGGACACATCGGATACCACTGTACCACTTTTGCACCTGGATATGGAC
TCACACCCTGGGGTTATCTAGGATCTTAAAGACTTTGCACGTCAATCTGG
CTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAGAGGGTGGG
TTAATCCTTCAACTTTCTATCCGGTCGGACAGGGCCCCATTGACACATGC
TCCCAAGATTCGTGGAATTTGAAACCGCCAACGACCTGAAGACGGCCATT
GAGAAACTGGATGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCATTGC
CGATGTAAGCAACTTTACTGGTACCTGTGATCTGAGTGGAACGAGAATTC
TCATACCCTTCCTAGATTCAAACTTACCCGGATGAACGTGCCATTCGTGA
CCCGTACCGGTCTCGATCCCCGCGTCGGAGCTACCCTCCCATGGATGAAT
ATGACCGGCGGTTCCCTGCGCCACGGGGATACAGCCCCCGGGCTCACTAT
CGGGAACGCTCCCCCATTCCAATCCGGAGGGACTATTATGACCGGGATGG
ATATGGACGTCGTACTCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCC
CGCGTCGTCCCTACGATGACCCGTACGATGTCCGCCCGCCACCACCACCT
CGCCATTATGACGACCCCTACGCACCCCCTCGCCCTTATGGACGGCCTCG
CAGTCCACCTCGGGGCGAGTACATGCCTTACGACCGCCGCGGATACTGGT
AG
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:1184166..1186667-

>ASPNIDRAFT_56436-T1 ID=ASPNIDRAFT_56436-T1|Name=ASPNIDRAFT_56436-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5400bp|location=Sequence derived from alignment at ACJE01000013.1:1184166..1186667- (Aspergillus niger ATCC 1015)
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGACGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTCCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGACGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTCCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGACGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTCCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGACGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTCCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGACGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTCCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGACGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTCCCCCGCAATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56436ASPNIDRAFT_56436Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56436-T1ASPNIDRAFT_56436-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56436-T1.cdsASPNIDRAFT_56436-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56436-T1.exon6ASPNIDRAFT_56436-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56436-T1.exon5ASPNIDRAFT_56436-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56436-T1.exon4ASPNIDRAFT_56436-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56436-T1.exon3ASPNIDRAFT_56436-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56436-T1.exon2ASPNIDRAFT_56436-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56436-T1.exon1ASPNIDRAFT_56436-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56436-T1.utr5p1ASPNIDRAFT_56436-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1184166..1186667 -
Powered by Drupal