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ASPNIDRAFT_56583-T1, ASPNIDRAFT_56583-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56583-T1
Unique NameASPNIDRAFT_56583-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:979293..980915-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56583-T1 ID=ASPNIDRAFT_56583-T1|Name=ASPNIDRAFT_56583-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1623bp|location=Sequence derived from alignment at ACJE01000002.1:979293..980915- (Aspergillus niger ATCC 1015)
GCCATCTTACCTTTCCGTTTCATCTTCTTCCCAATTCCCTCCATCTTCTC
TCTCTTCCTCTTTTTCTTCCGACTCTCTCTTTCCCTCTCTACCTCATAGT
CATACCTTATCATCATCATGCCTGCTGGATCAGTTCTTGTCACCGGGTAA
GCTTCTAATCAATGCCTTTGTCTCTCTAACGCACCCGCTGACCCCGCAAT
TCTCCCCCAAACAGTGGAACGGGCTACATTGGCTCTTTCACCACCCTCGC
TCTCCTCGAGGCTGGCTACAAGGTCGTCGTCGCTGACAACCTCTACAACT
CCTCTGCTGAGGCTCTCAAGCGCATTGAGTTGATCAGCGGCAAGAAGGCC
GAGTTCGCTCAGCTCGATGTCACCGACGAGGCTGGCTTTGACCGTGTCTT
CGAGGCTCACCCCGACATTGACAGCGTTATCCACTTTGCTGCTCTGAAGG
TGCGCTTTCCCTCTAACGTCTTCCTCCATATGCCTCAATCTACCTCTCTG
CATATCTCTTGCGCATCAAATGGAGGGTTCCTGGCTGACAGCTATCTAGG
CCGTCGGTGAGTCCGGTGAGAAGCCTCTGGACTACTACCACGTCAACGTC
TACGGCACCATCTGCCTCCTGCGCTCCATGGTCCGCCACAATGTCACCAA
CATCGTCTTCTCCAGCTCCGCCACCGTCTACGGTGATGCCACTCGCTTCC
CCAACATGATCCCCATCCCTGAGGAGTGCCCTCTGGGTCCCACCAACCCC
TACGGCAACACCAAGTTCGCCGTCGAGACTGCCATCACCGATGTCATCAA
CGCTCAGCGCAACAACGCCATCAAGGCCGGCAACGAGGCCGAGGCCCAGA
AGTGGAACGGTGCCCTGCTCCGCTACTTCAACCCCGCCGGTGCTCACCCC
TCTGGTATCATGGGTGAGGACCCCCAGGGTGTCCCCTACAACCTGCTTCC
CCTCCTTGCCCAGGTGGCCACCGGCAAGCGCGAGAAGCTGCTCGTCTTCG
GAGATGGTACGTTACCTCTTGCAGTAGAACTTGAAATTCTCAGCACCTAA
ACTAACTGGGTCAGACTACGCCTCCCACGACGGAACCGCCATCCGCGACT
ACATCCACATCCTCGACCTGGCGGATGGTCACTTGAAGGCCCTGAACTAC
CTCCGCGCCAACAACCCCGGAGTCCGTGCCTGGAACTTGGGTACCGGCAA
GGGCAGCACTGTCTACGAGATGATCCGTGCCTTCTCGGCGGCCGTGGGCC
GTGACCTCCCCTACGAGGTTGCTCCCCGCCGTGCTGGTGACGTCCTCAAC
CTGACCTCCAACCCCACGCGCGCCAACAACGAGCTGGGCTGGAAGGCCGA
GCGCACCCTCGAGCAGGCCTGTGAGGACCTCTGGCTGTGGACCCGCAACA
ACCCCCAGGGTTACCGCCAACAGCCCCCGGCCGAGCTGCTGGAGAAGCTG
CAGAAATAAATAATGACCCCGCATATGTTTAGAATTTCTTCTTTGTTTTG
CCAGGAAAATCGATAGAGACACGATTGGACTTGCTAATTGGATGACGAAT
TTCCTTTTTTTTCCCCCTTGTTGTATCTAGAGAGCAGAGCTTTGATGTTG
ATGTAACTGATTTCGCCATGCAA
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Coding sequence (CDS) from alignment at ACJE01000002.1:979293..980915-

>ASPNIDRAFT_56583-T1 ID=ASPNIDRAFT_56583-T1|Name=ASPNIDRAFT_56583-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4536bp|location=Sequence derived from alignment at ACJE01000002.1:979293..980915- (Aspergillus niger ATCC 1015)
ACTACGCCTCCCACGACGGAACCGCCATCCGCGACTACATCCACATCCTC
GACCTGGCGGATGGTCACTTGAAGGCCCTGAACTACCTCCGCGCCAACAA
CCCCGGAGTCCGTGCCTGGAACTTGGGTACCGGCAAGGGCAGCACTGTCT
ACGAGATGATCCGTGCCTTCTCGGCGGCCGTGGGCCGTGACCTCCCCTAC
GAGGTTGCTCCCCGCCGTGCTGGTGACGTCCTCAACCTGACCTCCAACCC
CACGCGCGCCAACAACGAGCTGGGCTGGAAGGCCGAGCGCACCCTCGAGC
AGGCCTGTGAGGACCTCTGGCTGTGGACCCGCAACAACCCCCAGGGTTAC
CGCCAACAGCCCCCGGCCGAGCTGCTGGAGAAGCTGCAGAAATAAGCCGT
CGGTGAGTCCGGTGAGAAGCCTCTGGACTACTACCACGTCAACGTCTACG
GCACCATCTGCCTCCTGCGCTCCATGGTCCGCCACAATGTCACCAACATC
GTCTTCTCCAGCTCCGCCACCGTCTACGGTGATGCCACTCGCTTCCCCAA
CATGATCCCCATCCCTGAGGAGTGCCCTCTGGGTCCCACCAACCCCTACG
GCAACACCAAGTTCGCCGTCGAGACTGCCATCACCGATGTCATCAACGCT
CAGCGCAACAACGCCATCAAGGCCGGCAACGAGGCCGAGGCCCAGAAGTG
GAACGGTGCCCTGCTCCGCTACTTCAACCCCGCCGGTGCTCACCCCTCTG
GTATCATGGGTGAGGACCCCCAGGGTGTCCCCTACAACCTGCTTCCCCTC
CTTGCCCAGGTGGCCACCGGCAAGCGCGAGAAGCTGCTCGTCTTCGGAGA
TGTGGAACGGGCTACATTGGCTCTTTCACCACCCTCGCTCTCCTCGAGGC
TGGCTACAAGGTCGTCGTCGCTGACAACCTCTACAACTCCTCTGCTGAGG
CTCTCAAGCGCATTGAGTTGATCAGCGGCAAGAAGGCCGAGTTCGCTCAG
CTCGATGTCACCGACGAGGCTGGCTTTGACCGTGTCTTCGAGGCTCACCC
CGACATTGACAGCGTTATCCACTTTGCTGCTCTGAAGGTGCGCTTTCCCT
CTAACATGCCTGCTGGATCAGTTCTTGTCACCGGACTACGCCTCCCACGA
CGGAACCGCCATCCGCGACTACATCCACATCCTCGACCTGGCGGATGGTC
ACTTGAAGGCCCTGAACTACCTCCGCGCCAACAACCCCGGAGTCCGTGCC
TGGAACTTGGGTACCGGCAAGGGCAGCACTGTCTACGAGATGATCCGTGC
CTTCTCGGCGGCCGTGGGCCGTGACCTCCCCTACGAGGTTGCTCCCCGCC
GTGCTGGTGACGTCCTCAACCTGACCTCCAACCCCACGCGCGCCAACAAC
GAGCTGGGCTGGAAGGCCGAGCGCACCCTCGAGCAGGCCTGTGAGGACCT
CTGGCTGTGGACCCGCAACAACCCCCAGGGTTACCGCCAACAGCCCCCGG
CCGAGCTGCTGGAGAAGCTGCAGAAATAAGCCGTCGGTGAGTCCGGTGAG
AAGCCTCTGGACTACTACCACGTCAACGTCTACGGCACCATCTGCCTCCT
GCGCTCCATGGTCCGCCACAATGTCACCAACATCGTCTTCTCCAGCTCCG
CCACCGTCTACGGTGATGCCACTCGCTTCCCCAACATGATCCCCATCCCT
GAGGAGTGCCCTCTGGGTCCCACCAACCCCTACGGCAACACCAAGTTCGC
CGTCGAGACTGCCATCACCGATGTCATCAACGCTCAGCGCAACAACGCCA
TCAAGGCCGGCAACGAGGCCGAGGCCCAGAAGTGGAACGGTGCCCTGCTC
CGCTACTTCAACCCCGCCGGTGCTCACCCCTCTGGTATCATGGGTGAGGA
CCCCCAGGGTGTCCCCTACAACCTGCTTCCCCTCCTTGCCCAGGTGGCCA
CCGGCAAGCGCGAGAAGCTGCTCGTCTTCGGAGATGTGGAACGGGCTACA
TTGGCTCTTTCACCACCCTCGCTCTCCTCGAGGCTGGCTACAAGGTCGTC
GTCGCTGACAACCTCTACAACTCCTCTGCTGAGGCTCTCAAGCGCATTGA
GTTGATCAGCGGCAAGAAGGCCGAGTTCGCTCAGCTCGATGTCACCGACG
AGGCTGGCTTTGACCGTGTCTTCGAGGCTCACCCCGACATTGACAGCGTT
ATCCACTTTGCTGCTCTGAAGGTGCGCTTTCCCTCTAACATGCCTGCTGG
ATCAGTTCTTGTCACCGGACTACGCCTCCCACGACGGAACCGCCATCCGC
GACTACATCCACATCCTCGACCTGGCGGATGGTCACTTGAAGGCCCTGAA
CTACCTCCGCGCCAACAACCCCGGAGTCCGTGCCTGGAACTTGGGTACCG
GCAAGGGCAGCACTGTCTACGAGATGATCCGTGCCTTCTCGGCGGCCGTG
GGCCGTGACCTCCCCTACGAGGTTGCTCCCCGCCGTGCTGGTGACGTCCT
CAACCTGACCTCCAACCCCACGCGCGCCAACAACGAGCTGGGCTGGAAGG
CCGAGCGCACCCTCGAGCAGGCCTGTGAGGACCTCTGGCTGTGGACCCGC
AACAACCCCCAGGGTTACCGCCAACAGCCCCCGGCCGAGCTGCTGGAGAA
GCTGCAGAAATAAGCCGTCGGTGAGTCCGGTGAGAAGCCTCTGGACTACT
ACCACGTCAACGTCTACGGCACCATCTGCCTCCTGCGCTCCATGGTCCGC
CACAATGTCACCAACATCGTCTTCTCCAGCTCCGCCACCGTCTACGGTGA
TGCCACTCGCTTCCCCAACATGATCCCCATCCCTGAGGAGTGCCCTCTGG
GTCCCACCAACCCCTACGGCAACACCAAGTTCGCCGTCGAGACTGCCATC
ACCGATGTCATCAACGCTCAGCGCAACAACGCCATCAAGGCCGGCAACGA
GGCCGAGGCCCAGAAGTGGAACGGTGCCCTGCTCCGCTACTTCAACCCCG
CCGGTGCTCACCCCTCTGGTATCATGGGTGAGGACCCCCAGGGTGTCCCC
TACAACCTGCTTCCCCTCCTTGCCCAGGTGGCCACCGGCAAGCGCGAGAA
GCTGCTCGTCTTCGGAGATGTGGAACGGGCTACATTGGCTCTTTCACCAC
CCTCGCTCTCCTCGAGGCTGGCTACAAGGTCGTCGTCGCTGACAACCTCT
ACAACTCCTCTGCTGAGGCTCTCAAGCGCATTGAGTTGATCAGCGGCAAG
AAGGCCGAGTTCGCTCAGCTCGATGTCACCGACGAGGCTGGCTTTGACCG
TGTCTTCGAGGCTCACCCCGACATTGACAGCGTTATCCACTTTGCTGCTC
TGAAGGTGCGCTTTCCCTCTAACATGCCTGCTGGATCAGTTCTTGTCACC
GGACTACGCCTCCCACGACGGAACCGCCATCCGCGACTACATCCACATCC
TCGACCTGGCGGATGGTCACTTGAAGGCCCTGAACTACCTCCGCGCCAAC
AACCCCGGAGTCCGTGCCTGGAACTTGGGTACCGGCAAGGGCAGCACTGT
CTACGAGATGATCCGTGCCTTCTCGGCGGCCGTGGGCCGTGACCTCCCCT
ACGAGGTTGCTCCCCGCCGTGCTGGTGACGTCCTCAACCTGACCTCCAAC
CCCACGCGCGCCAACAACGAGCTGGGCTGGAAGGCCGAGCGCACCCTCGA
GCAGGCCTGTGAGGACCTCTGGCTGTGGACCCGCAACAACCCCCAGGGTT
ACCGCCAACAGCCCCCGGCCGAGCTGCTGGAGAAGCTGCAGAAATAAGCC
GTCGGTGAGTCCGGTGAGAAGCCTCTGGACTACTACCACGTCAACGTCTA
CGGCACCATCTGCCTCCTGCGCTCCATGGTCCGCCACAATGTCACCAACA
TCGTCTTCTCCAGCTCCGCCACCGTCTACGGTGATGCCACTCGCTTCCCC
AACATGATCCCCATCCCTGAGGAGTGCCCTCTGGGTCCCACCAACCCCTA
CGGCAACACCAAGTTCGCCGTCGAGACTGCCATCACCGATGTCATCAACG
CTCAGCGCAACAACGCCATCAAGGCCGGCAACGAGGCCGAGGCCCAGAAG
TGGAACGGTGCCCTGCTCCGCTACTTCAACCCCGCCGGTGCTCACCCCTC
TGGTATCATGGGTGAGGACCCCCAGGGTGTCCCCTACAACCTGCTTCCCC
TCCTTGCCCAGGTGGCCACCGGCAAGCGCGAGAAGCTGCTCGTCTTCGGA
GATGTGGAACGGGCTACATTGGCTCTTTCACCACCCTCGCTCTCCTCGAG
GCTGGCTACAAGGTCGTCGTCGCTGACAACCTCTACAACTCCTCTGCTGA
GGCTCTCAAGCGCATTGAGTTGATCAGCGGCAAGAAGGCCGAGTTCGCTC
AGCTCGATGTCACCGACGAGGCTGGCTTTGACCGTGTCTTCGAGGCTCAC
CCCGACATTGACAGCGTTATCCACTTTGCTGCTCTGAAGGTGCGCTTTCC
CTCTAACATGCCTGCTGGATCAGTTCTTGTCACCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006012galactose metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003978UDP-glucose 4-epimerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56583ASPNIDRAFT_56583Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56583-T1ASPNIDRAFT_56583-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56583-T1.cdsASPNIDRAFT_56583-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56583-T1.utr3p1ASPNIDRAFT_56583-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56583-T1.exon4ASPNIDRAFT_56583-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56583-T1.exon3ASPNIDRAFT_56583-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56583-T1.exon2ASPNIDRAFT_56583-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56583-T1.exon1ASPNIDRAFT_56583-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56583-T1.utr5p1ASPNIDRAFT_56583-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR005886
DBxrefInterPro:IPR016040
DBxrefPFAM:PF04321
DBxrefPFAM:PF08659
DBxrefPFAM:PF16363
DBxrefPFAM:PF01370
DBxrefPFAM:PF00106
DBxrefPFAM:PF01073
ProductUDP-glucose 4-epimerase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:979293..980915 -
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