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ASPNIDRAFT_56666-T1, ASPNIDRAFT_56666-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56666-T1
Unique NameASPNIDRAFT_56666-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1340340..1341518+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56666-T1 ID=ASPNIDRAFT_56666-T1|Name=ASPNIDRAFT_56666-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1179bp|location=Sequence derived from alignment at ACJE01000006.1:1340340..1341518+ (Aspergillus niger ATCC 1015)
TCCCACTCGAGTTCCAACCTTATATACATACATACATCTATATACTACCC
TCCTCCCTCTATACCACCTCACCTCCATCACCACTCACCTATTACCTTCC
TACCTATCTACTACCTCAACACTCAACATGGATCTCGCCAGCCTCATCTC
CCACCCGGGACCCGATCCCATCATGAAGTCTAGAGCCTCATACAGCCCTC
CCATGACTTCCTACAAGCGCTCCATCGAACACACCTCGGACTCCTACTTC
CCCTCCGTCCCGATCTCCTACACCCGCTCCCCGCAGCCTCCTCTCTCCCC
GCCTGTCGAGGACCAGTCCCCCAAGTGCTCTCTTCCCTCCATCTCTACCT
TGCTCGAGGGCGCAGATGGCGCAGCTATGCATGCAGCAAGTATGGCCCCC
AATGCTTAGGGAAATTGTCCGGAGAAGACCGAAGGAGTCAATGCTGACAA
GAGATTCCTGCAGAGCGCACTAGAATGACCCCTCCTCTGCAACGCGACCT
TGATTCCCGCCAACAGTCGCAAGCATATGACCTCAAAGCTAACGGCCCCC
AAATCGCCTTGCCCCCCACCCCCCCATTGCGCCCCGGTTCTAGCTTCCAC
AGCGCCGGACACTCCCCCGCCTCCTCCATCTCTGCTGCCAGCGATGCTGC
TGCGCCCAAGCGCTCCGACTCCTACCCTCAAGTGCCCATGGCTCTGCCTA
GCCCCTCGGATCGCTCGTCCATCTCCAGCCAGGGTTCAGTTCAGGGTGTC
TCCAGTGCTTCCTACGCTTCTCCCGCTCCCAGCGTCTCTTCCTACTCCTC
TCCCATTGAGCCTTCGGCCTCGTCCGCCATGTTCTACCAACGCACGGCTC
CCTCCACTTCCGCCGCTCCTCTCCCGACGCCAGCAGCACCGCAACAGATT
ATCTCCCCTGTGAACCCTGCCTGGCAGCACCACCACTACTTCCCTCCCTC
CAGCACCACGCCCTACCAGCAGAACCATGATCGCTATATCTGCCGCACCT
GCCACAAGGCCTTCTCGAGACCCTCCAGCCTGCGCATCCACTCCCACAGC
CACACGGGCGAGAAGCCCTTCCGCTGCACCCACGCCGGTTGTGGGAAGGC
CTTCAGCGTGCGCAGCAACATGAAGCGTCATGAGCGTGGCTGCCACAGTG
GTCGGCCCGTCGCAACCGCCATGGTTTAA
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Coding sequence (CDS) from alignment at ACJE01000006.1:1340340..1341518+

>ASPNIDRAFT_56666-T1 ID=ASPNIDRAFT_56666-T1|Name=ASPNIDRAFT_56666-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1956bp|location=Sequence derived from alignment at ACJE01000006.1:1340340..1341518+ (Aspergillus niger ATCC 1015)
ATGGATCTCGCCAGCCTCATCTCCCACCCGGGACCCGATCCCATCATGAA
GTCTAGAGCCTCATACAGCCCTCCCATGACTTCCTACAAGCGCTCCATCG
AACACACCTCGGACTCCTACTTCCCCTCCGTCCCGATCTCCTACACCCGC
TCCCCGCAGCCTCCTCTCTCCCCGCCTGTCGAGGACCAGTCCCCCAAGTG
CTCTCTTCCCTCCATCTCTACCTTGCTCGAGGGCGCAGATGGCGCAGCTA
TGCATGCAGCAAAGCGCACTAGAATGACCCCTCCTCTGCAACGCGACCTT
GATTCCCGCCAACAGTCGCAAGCATATGACCTCAAAGCTAACGGCCCCCA
AATCGCCTTGCCCCCCACCCCCCCATTGCGCCCCGGTTCTAGCTTCCACA
GCGCCGGACACTCCCCCGCCTCCTCCATCTCTGCTGCCAGCGATGCTGCT
GCGCCCAAGCGCTCCGACTCCTACCCTCAAGTGCCCATGGCTCTGCCTAG
CCCCTCGGATCGCTCGTCCATCTCCAGCCAGGGTTCAGTTCAGGGTGTCT
CCAGTGCTTCCTACGCTTCTCCCGCTCCCAGCGTCTCTTCCTACTCCTCT
CCCATTGAGCCTTCGGCCTCGTCCGCCATGTTCTACCAACGCACGGCTCC
CTCCACTTCCGCCGCTCCTCTCCCGACGCCAGCAGCACCGCAACAGATTA
TCTCCCCTGTGAACCCTGCCTGGCAGCACCACCACTACTTCCCTCCCTCC
AGCACCACGCCCTACCAGCAGAACCATGATCGCTATATCTGCCGCACCTG
CCACAAGGCCTTCTCGAGACCCTCCAGCCTGCGCATCCACTCCCACAGCC
ACACGGGCGAGAAGCCCTTCCGCTGCACCCACGCCGGTTGTGGGAAGGCC
TTCAGCGTGCGCAGCAACATGAAGCGTCATGAGCGTGGCTGCCACAGTGG
TCGGCCCGTCGCAACCGCCATGGTTTAAATGGATCTCGCCAGCCTCATCT
CCCACCCGGGACCCGATCCCATCATGAAGTCTAGAGCCTCATACAGCCCT
CCCATGACTTCCTACAAGCGCTCCATCGAACACACCTCGGACTCCTACTT
CCCCTCCGTCCCGATCTCCTACACCCGCTCCCCGCAGCCTCCTCTCTCCC
CGCCTGTCGAGGACCAGTCCCCCAAGTGCTCTCTTCCCTCCATCTCTACC
TTGCTCGAGGGCGCAGATGGCGCAGCTATGCATGCAGCAAAGCGCACTAG
AATGACCCCTCCTCTGCAACGCGACCTTGATTCCCGCCAACAGTCGCAAG
CATATGACCTCAAAGCTAACGGCCCCCAAATCGCCTTGCCCCCCACCCCC
CCATTGCGCCCCGGTTCTAGCTTCCACAGCGCCGGACACTCCCCCGCCTC
CTCCATCTCTGCTGCCAGCGATGCTGCTGCGCCCAAGCGCTCCGACTCCT
ACCCTCAAGTGCCCATGGCTCTGCCTAGCCCCTCGGATCGCTCGTCCATC
TCCAGCCAGGGTTCAGTTCAGGGTGTCTCCAGTGCTTCCTACGCTTCTCC
CGCTCCCAGCGTCTCTTCCTACTCCTCTCCCATTGAGCCTTCGGCCTCGT
CCGCCATGTTCTACCAACGCACGGCTCCCTCCACTTCCGCCGCTCCTCTC
CCGACGCCAGCAGCACCGCAACAGATTATCTCCCCTGTGAACCCTGCCTG
GCAGCACCACCACTACTTCCCTCCCTCCAGCACCACGCCCTACCAGCAGA
ACCATGATCGCTATATCTGCCGCACCTGCCACAAGGCCTTCTCGAGACCC
TCCAGCCTGCGCATCCACTCCCACAGCCACACGGGCGAGAAGCCCTTCCG
CTGCACCCACGCCGGTTGTGGGAAGGCCTTCAGCGTGCGCAGCAACATGA
AGCGTCATGAGCGTGGCTGCCACAGTGGTCGGCCCGTCGCAACCGCCATG
GTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56666ASPNIDRAFT_56666Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56666-T1.utr5p1ASPNIDRAFT_56666-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56666-T1.exon1ASPNIDRAFT_56666-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56666-T1.exon2ASPNIDRAFT_56666-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56666-T1.cdsASPNIDRAFT_56666-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56666-T1ASPNIDRAFT_56666-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
ProductZn-finger protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1340340..1341518 +
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