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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000001.1:631104..634290- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_56942-T1 ID=ASPNIDRAFT_56942-T1|Name=ASPNIDRAFT_56942-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=3187bp|location=Sequence derived from alignment at ACJE01000001.1:631104..634290- (Aspergillus niger ATCC 1015)
GTAGCAGCAACGCGTCTTCAACTAGCTCCTTCGCTTCTGTATCCCTCATG
GCGCTCTTGTTATTTGAAGCAGCCCACTAACACCTGTACTCAATCGAGGC
CGCGTTGATCCCACACCTACCTCTTACGGTATGTCATCTCACGTTATTTA
CCGTGTTAAGGACCATTCATTGTCGTACTGACCTGGTATCGCATCTTGCA
GCTGTCTTGACCTCTTACTGTCTAGCGCCTTCTTTTACCGCAGTGCCGCT
CCCATTGAAGCCCGCGATTACGCGATCGTTTGCGACCCGTTGCTCTGTAC
AGTATCTACAACTCGGTATTGCTAGAAGACAATGGATCCGGAGGACTCTC
TTGCAGACCCGTTTTCCAGCCAGGGTTTATGGAGAGTCTCCAAGTTTACC
TTACAGTCTCTACAGCCGTTGGAGCGCTTGGGGTGGGACGAAAAATTACC
TGATCTTTCGAGTGCTTTTTTCGAGTCTCATTTGAACATCTTCGACAAAT
TCGGCACGGAAATCCCTAGCATTAATCCTTTCGGTACCGACTTATTGGAT
GGGGATCAGACGCTGGAGTTGGATAACGATACGTCAAGTGAGAACCAAGT
TATTGCGACTACCGATGAGCAGGACATTGAAGACGAGCCGGAGGATATAT
GGGCACTTGGGAATCAAGATATCGAGCAGGAGCGCTGCGATTTGCTGAAA
TCCTGGGAGAAATACCGCGAGCGGACATATCGCGAACCTGTTTCGGCATA
CTTTAGCGAATCCGGTGCGAAAGGCTTTGATGCTGCATTGGCACGGCAAG
CTGCAAAGGTGGGAACACAGACCCAGAGGTTTATGGTCAGGCGAGATGTG
TTCTTCCAGGCGTTGCTCAAGCTTGGGCTTGGGTGGGGCTCTATGTTTTT
CAAATATGATGAACATAAGAAGCAGTTCGAACGAGTGCACAACAATATTC
GGATTTCTGGGATAACATCAGTTGCACTAAATGGGCTAACTGAGGAGCTG
ATTCAATGCGGCACAAACATGCAGAAAATACGGGTTTTTGCTAATAAGGT
GCCAAGTAGGCCAAAGGAACTCTCTGCTCGGTCGGCCTTTGCGAGTGCCG
CGGCTGTGGTTGTCTATACACTCGAGAAGCAGCTTGTCGGACAATTCGCC
AGTGTTACCTCTCTCCTTCAGATCAAGGCGCTGTTTCATGAATGCGGGAA
GGTGGTGACCATCCTAGCGAATGTGATCGAGGCAATTGATGGTGCAGTGT
CCGAGGCACAGATAATATCTGTTGTTTCTGAACGAGCCGCCCACTTCTCG
CAAATATTCGACCATATAGAACCTCTCTTACGCGAGATTGTGAGTCGAGT
GGCCGAGCCCTGGCTGAGGCACGTAGAGACCTGGGTTGGCCTTCGTCCAG
AGACAGCGGCATCAGTAGACCTGGCTTCGAGTGGTAGGAGCTTTGTCGTT
GCGGAGAGCCAGGAGAAATCTAGAAAGGCAACAAAGGCGCCGAGGGTTGA
CTACAAGTATCTGCCTGATAATATGCCCTCTTTCATCCCTGATGACCTGG
CGTCTTTGGTTTTCGAGAGTGGACGAAGCCTGAGGCTCCTTAAAACATAT
CACCCTCAACATCCAGTCGCCAACCATGAGATGTACCGTTCTACTACGCC
CACTTTTGAATGTGCGGGTACGTGGTTCGATATAACAAGAATCGAAAAGA
AGGCCATAGAGTACGAAGCTAGACTACGCTCTGAGATACTCAAATACAAC
CGTGGTGATATGGATAGAGGGCCAGGCAGAATATCTGTTGCCGACGCTTC
TGAATCGACTGGGGAGTCAGATGTGCTCACAGACACTTTTGAACTCTTTG
ACCTCGATAACATGCCGAATCCCACAGGGCTGTTACCAATGGATGGAAGC
TCTAGAGATCAGCTTGGCCATCTAATTGATGGAAACGTCCACTGCAATGC
TGAACAGCCTGCAGCTCATAGCAACTTCGGTCCGGAACTGACCTCATCAT
ATTACCTATCTTTGGCGCCTCTCCTCTGCTCTCAGGCACTATTGATCGAT
TTCTCTTGTCTCCATCTACTATTTAAAGAGCATCATCTTCGAACCCACCT
CAACCTCCAATGGCGGTTCCAGCTCCTTGGTGATGGTTATTTCACCTCTC
GTCTCTCTGATTCCCTTTTTGATCCCGACATGGAAAGCGGAGAGCGCAAA
GCTGGTGTAGTGAGGAGTGACGTCCACGCTGGATTACGCCTGGGAAGCCG
AGATACATGGCCTCCAGCCAGTTCAGAATTACGGCTGGTACTGATGGGTC
TACTTAATGAATGCCATGATGCGGAAAAACGCTTGGACCCGTCGATGGAC
TCTAAACTGTGGAATGAAAAGGAGCTACCTGGTGGCCTTAGCTTCTCTAT
CCGTGACCTAACGGATGAGGAGGTTGTGAAATGCAAAGACCCAAATGCCA
TTGAGGCGCTTGATTTCCTTCGTCTCCAGTACAAACCCTTGCCTGTGCTG
GAGACAATATTGACTTCGAATTCTCTTGAAAAATATGACCGTCTCTTCAA
GCATTTGCTCCGACTGCTACGCATGGTATCAGTTGTTAGGAGTCTCATTC
GAGATTCAACTGCGAGAGACTCCCTATCAGGTGATACGCGGAATGTGCTC
CAGAAATTCCGGGTGGATGCGCAGCATTTTGTGCTAGCCGTAAGCGACTA
CTGCTTCCATGTCGGGATTGGAGCTACATGGCGACGATTTCAGGAGACCC
TATCGAATATTGAATCTTGTCTTGACCGACATGATATAAATGGTACGATT
GAAGCGGCCAGCTCAGTCCCTAGACTGCGCGACTACCATGAAGACGTCTT
AGATCAGATGCTTTATGCCCTTTTTCTCAGCAAAAAGCATACTGAGGTCG
CAAATCTCCTTGATGAAATCTTTGGAACAATTCTCACCTTTGCTCCGCTC
TCGCAGCTGGACGGGATTAATGGAGTACGCCACGAGGCGGAGCCTGCTGT
TCGTCGATTGTACAATCTCTTTAGGAAACAAAACTCTGCCTTTGTCGGCT
ATTTACGCCGCATAGAAGGCATCAAATCTACGTCGAGGTCTTTTGATCGG
TGGGATACGACGTTTACTGCCAAGGAGGAGCCTGCAACAGTCTTCGACCA
TCTGCTGGCCCGTTTAGACACGAAAAGGTACTACTAA back to topCoding sequence (CDS) from alignment at ACJE01000001.1:631104..634290- >ASPNIDRAFT_56942-T1 ID=ASPNIDRAFT_56942-T1|Name=ASPNIDRAFT_56942-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2856bp|location=Sequence derived from alignment at ACJE01000001.1:631104..634290- (Aspergillus niger ATCC 1015)
ATGGATCCGGAGGACTCTCTTGCAGACCCGTTTTCCAGCCAGGGTTTATG
GAGAGTCTCCAAGTTTACCTTACAGTCTCTACAGCCGTTGGAGCGCTTGG
GGTGGGACGAAAAATTACCTGATCTTTCGAGTGCTTTTTTCGAGTCTCAT
TTGAACATCTTCGACAAATTCGGCACGGAAATCCCTAGCATTAATCCTTT
CGGTACCGACTTATTGGATGGGGATCAGACGCTGGAGTTGGATAACGATA
CGTCAAGTGAGAACCAAGTTATTGCGACTACCGATGAGCAGGACATTGAA
GACGAGCCGGAGGATATATGGGCACTTGGGAATCAAGATATCGAGCAGGA
GCGCTGCGATTTGCTGAAATCCTGGGAGAAATACCGCGAGCGGACATATC
GCGAACCTGTTTCGGCATACTTTAGCGAATCCGGTGCGAAAGGCTTTGAT
GCTGCATTGGCACGGCAAGCTGCAAAGGTGGGAACACAGACCCAGAGGTT
TATGGTCAGGCGAGATGTGTTCTTCCAGGCGTTGCTCAAGCTTGGGCTTG
GGTGGGGCTCTATGTTTTTCAAATATGATGAACATAAGAAGCAGTTCGAA
CGAGTGCACAACAATATTCGGATTTCTGGGATAACATCAGTTGCACTAAA
TGGGCTAACTGAGGAGCTGATTCAATGCGGCACAAACATGCAGAAAATAC
GGGTTTTTGCTAATAAGGTGCCAAGTAGGCCAAAGGAACTCTCTGCTCGG
TCGGCCTTTGCGAGTGCCGCGGCTGTGGTTGTCTATACACTCGAGAAGCA
GCTTGTCGGACAATTCGCCAGTGTTACCTCTCTCCTTCAGATCAAGGCGC
TGTTTCATGAATGCGGGAAGGTGGTGACCATCCTAGCGAATGTGATCGAG
GCAATTGATGGTGCAGTGTCCGAGGCACAGATAATATCTGTTGTTTCTGA
ACGAGCCGCCCACTTCTCGCAAATATTCGACCATATAGAACCTCTCTTAC
GCGAGATTGTGAGTCGAGTGGCCGAGCCCTGGCTGAGGCACGTAGAGACC
TGGGTTGGCCTTCGTCCAGAGACAGCGGCATCAGTAGACCTGGCTTCGAG
TGGTAGGAGCTTTGTCGTTGCGGAGAGCCAGGAGAAATCTAGAAAGGCAA
CAAAGGCGCCGAGGGTTGACTACAAGTATCTGCCTGATAATATGCCCTCT
TTCATCCCTGATGACCTGGCGTCTTTGGTTTTCGAGAGTGGACGAAGCCT
GAGGCTCCTTAAAACATATCACCCTCAACATCCAGTCGCCAACCATGAGA
TGTACCGTTCTACTACGCCCACTTTTGAATGTGCGGGTACGTGGTTCGAT
ATAACAAGAATCGAAAAGAAGGCCATAGAGTACGAAGCTAGACTACGCTC
TGAGATACTCAAATACAACCGTGGTGATATGGATAGAGGGCCAGGCAGAA
TATCTGTTGCCGACGCTTCTGAATCGACTGGGGAGTCAGATGTGCTCACA
GACACTTTTGAACTCTTTGACCTCGATAACATGCCGAATCCCACAGGGCT
GTTACCAATGGATGGAAGCTCTAGAGATCAGCTTGGCCATCTAATTGATG
GAAACGTCCACTGCAATGCTGAACAGCCTGCAGCTCATAGCAACTTCGGT
CCGGAACTGACCTCATCATATTACCTATCTTTGGCGCCTCTCCTCTGCTC
TCAGGCACTATTGATCGATTTCTCTTGTCTCCATCTACTATTTAAAGAGC
ATCATCTTCGAACCCACCTCAACCTCCAATGGCGGTTCCAGCTCCTTGGT
GATGGTTATTTCACCTCTCGTCTCTCTGATTCCCTTTTTGATCCCGACAT
GGAAAGCGGAGAGCGCAAAGCTGGTGTAGTGAGGAGTGACGTCCACGCTG
GATTACGCCTGGGAAGCCGAGATACATGGCCTCCAGCCAGTTCAGAATTA
CGGCTGGTACTGATGGGTCTACTTAATGAATGCCATGATGCGGAAAAACG
CTTGGACCCGTCGATGGACTCTAAACTGTGGAATGAAAAGGAGCTACCTG
GTGGCCTTAGCTTCTCTATCCGTGACCTAACGGATGAGGAGGTTGTGAAA
TGCAAAGACCCAAATGCCATTGAGGCGCTTGATTTCCTTCGTCTCCAGTA
CAAACCCTTGCCTGTGCTGGAGACAATATTGACTTCGAATTCTCTTGAAA
AATATGACCGTCTCTTCAAGCATTTGCTCCGACTGCTACGCATGGTATCA
GTTGTTAGGAGTCTCATTCGAGATTCAACTGCGAGAGACTCCCTATCAGG
TGATACGCGGAATGTGCTCCAGAAATTCCGGGTGGATGCGCAGCATTTTG
TGCTAGCCGTAAGCGACTACTGCTTCCATGTCGGGATTGGAGCTACATGG
CGACGATTTCAGGAGACCCTATCGAATATTGAATCTTGTCTTGACCGACA
TGATATAAATGGTACGATTGAAGCGGCCAGCTCAGTCCCTAGACTGCGCG
ACTACCATGAAGACGTCTTAGATCAGATGCTTTATGCCCTTTTTCTCAGC
AAAAAGCATACTGAGGTCGCAAATCTCCTTGATGAAATCTTTGGAACAAT
TCTCACCTTTGCTCCGCTCTCGCAGCTGGACGGGATTAATGGAGTACGCC
ACGAGGCGGAGCCTGCTGTTCGTCGATTGTACAATCTCTTTAGGAAACAA
AACTCTGCCTTTGTCGGCTATTTACGCCGCATAGAAGGCATCAAATCTAC
GTCGAGGTCTTTTGATCGGTGGGATACGACGTTTACTGCCAAGGAGGAGC
CTGCAACAGTCTTCGACCATCTGCTGGCCCGTTTAGACACGAAAAGGTAC
TACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043015 | gamma-tubulin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR042241 |
| DBxref | InterPro:IPR041470 |
| DBxref | InterPro:IPR040457 |
| DBxref | PFAM:PF17681 |
| DBxref | PFAM:PF04130 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000001.1 | supercontig | ACJE01000001.1:631104..634290 - |
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