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ASPNIDRAFT_57038-T1, ASPNIDRAFT_57038-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_57038-T1
Unique NameASPNIDRAFT_57038-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:801178..802149-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_57038-T1 ID=ASPNIDRAFT_57038-T1|Name=ASPNIDRAFT_57038-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=972bp|location=Sequence derived from alignment at ACJE01000016.1:801178..802149- (Aspergillus niger ATCC 1015)
CGCCGATCTCCATCTCCAATCAATCCAGACCCCAATACCACCACCACACC
TCACCAATCACCCCCTTCCACCCTCACACACGAACAAAATGTCCTCCCTC
AACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCAACGCCTCATCCA
ACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCAATCAAAGCGATC
CTCTCCCCTCCTGGTATATATACCCCCCCAATGCCCACTCCATCCAGCCC
ACCCGGGTCAACCTTACTGATATGATGATACGGACAGGACATCCCTCCAA
TCCCAAGCAACCATCATCTCCAACAACCTCCTCACCATCTCCGACCACCT
CTCCGATAACCGCGACCTCCTATCCAACATCGTCGCCTACCCCGACGCAT
CTTATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCTCGAGCAAGTCCTG
CGCACGAAACTAGATCCCCGCGTTGAGGATTGGGTAGCGCGCGGTCGTCG
CGCCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCCGGAGCACTGGGAC
AATACCAGACCAGCAGTGGACAGAGATTATTGAGTGATGATGCGATTGCT
GAATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGGAGGCCAGGAAGAG
GAATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAGATGGGGATTGAGA
ATGTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGATGATGAGGAGGAT
GAGAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATGAGATGGAGGTTGT
CGGGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTGGAGTTCGATATTG
CTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCGGGGGCTAAGGTG
GTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTTCATGACTACGGG
GGCTGTGCCGGGACAGCGGTGA
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Coding sequence (CDS) from alignment at ACJE01000016.1:801178..802149-

>ASPNIDRAFT_57038-T1 ID=ASPNIDRAFT_57038-T1|Name=ASPNIDRAFT_57038-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1620bp|location=Sequence derived from alignment at ACJE01000016.1:801178..802149- (Aspergillus niger ATCC 1015)
GACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAACCTCCTCACCA
TCTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAACATCGTCGCC
TACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCT
CGAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAGGATTGGGTAG
CGCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCC
GGAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGATTATTGAGTGA
TGATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGG
AGGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAG
ATGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGA
TGATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATG
AGATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTG
GAGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGC
GGGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGT
TCATGACTACGGGGGCTGTGCCGGGACAGCGGTGAATGTCCTCCCTCAAC
CAAGACCAAATCAAAACCCTCGAACAATCCCGCCAACGCCTCATCCAACT
CACCCATTCCCTCGCCTCTCTCATAACCAGTCTCAATCAAAGCGATCCTC
TCCCCTCCTGGACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAAC
CTCCTCACCATCTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAA
CATCGTCGCCTACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATA
ACGTCGCCCTCGAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAG
GATTGGGTAGCGCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGA
TGCTGGAGCCGGAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGAT
TATTGAGTGATGATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCG
GCGAATGAGGAGGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGA
GGAGCGGGAGATGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGT
TGGAGGATGATGATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGC
GAGGCGGATGAGATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGG
AGCTGGGCTGGAGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTA
ATGCTGGTGCGGGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAG
ATTCTGAGGTTCATGACTACGGGGGCTGTGCCGGGACAGCGGTGAATGTC
CTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCAACGCC
TCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCAATCAA
AGCGATCCTCTCCCCTCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MED8ASPNIDRAFT_57038Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57038-T1ASPNIDRAFT_57038-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57038-T1.cdsASPNIDRAFT_57038-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57038-T1.exon2ASPNIDRAFT_57038-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57038-T1.exon1ASPNIDRAFT_57038-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57038-T1.utr5p1ASPNIDRAFT_57038-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019364
DBxrefPFAM:PF10232
Productmediator of RNA polymerase II transcription subunit 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:801178..802149 -
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