You are here

Home

ATCC10864_000012-T1, ATCC10864_000012-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000012-T1
Unique NameATCC10864_000012-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:45495..46934+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000012-T1 ID=ATCC10864_000012-T1|Name=ATCC10864_000012-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1440bp|location=Sequence derived from alignment at MCQH01000006:45495..46934+ (Aspergillus niger ATCC 10864)
ATGCCCGCCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGA
GGTGAGTCCGCGCTGAGCCTATACCCATGTACAGCTCCGGACAATCGACT
GACCCATTGCCAATGTCCATATAGGTTACCGCCGAGGCCATCAAGGTTAG
CAAACCACGCCCAGCTACGAATTGAGCTCCGAAAGTTCCCCAAATACTAA
TTCTGCTCCGCTATAGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACA
TCACCCTCAACCTCCAGGACCACCTGCTGGGCGGTGTACGTCCCATCCAA
ATCCCATCTATAGAAGACCATAAACCGCTGATACAGCTACATAGGCCTCC
ATTGACGCCACAGGCAACCCTCTGACTGACGAGGCCCTGGCCGCGGCCAA
GAATGCCGATGCCGTTCTCCTTGGTGCCATCGGTGGACCGGTACACTCCC
CCGATCTATCCTCCACCCCCATCCTCATCACCACCAACAACAACTAACCC
AACCAACAGAAATGGGGCACCGGCGCCGTCCGCCCGGAGCAGGGTCTCCT
CAAGCTTCGCAAAGAGATGGGCACATTCGGCAACCTGCGTCCCTGCAACT
TCGCGGCCCCCTCCTTGGTCGAACACTCCCCCCTGAAAGCCTCCGTCTGC
GAGGGCGTCGACTTCAACATCATCCGCGAACTGACGGGCGGAATCTACTT
CGGTGACCGCAAGGAAGATGACGGCAGCGGCTACGCCATGGACACGGAGC
CGTACTCGCGCGCCGAGATCGAGCGGATCACGCGCCTCGCGGCCCACCTT
GCTCTGCAGCACAACCCCCCTCTCCCCGTGTGGAGTCTGGATAAGGCCAA
CGTGCTGGCTACGAGTCGGTTGTGGAGGAAGACCGTCACCGAGATCATGG
CGAAGGAGTTCCCACAGTTGAAGATTGAGCACCAGCTTATTGATTCTGCG
GCTATGATTATGGTTAAGAACCCCCGTCAGCTGAACGGCATTATTGTCAC
GAGTAACCTGTTCGGTGATATCATTAGTGATGAGGCTAGTGTTATTCCTG
GTTCTCTGGGATTGTTGCCTAGTGCTAGTTTGAGTGGTATCCCTGATGGT
AAGGGTAGGGTTAATGGTATTTATGAGCCTATTCATGGTATGTTGTTTCC
CTCTTTCTCACTTTTTTTTGGGTCGTGGTGGAAGTGCGGTTTGCTAACTG
GGTTCAGGCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAACCCTGT
CGCTGCTATCCTGTCCGTCGCTATGATGATGCAGTACTCTTTCGGTCGCT
TCGATGAGGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCC
GGTGTCCGTACCGGTGACATTGGCGGTAAGGCTACCACTAGCGAGGTTGG
TGATGCCGTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000006:45495..46934+

>ATCC10864_000012-T1 ID=ATCC10864_000012-T1|Name=ATCC10864_000012-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6588bp|location=Sequence derived from alignment at MCQH01000006:45495..46934+ (Aspergillus niger ATCC 10864)
ATGCCCGCCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGA
GGTTACCGCCGAGGCCATCAAGGTCCTCCGCGTCATCGAGAAGAGCCGCG
ATGACATCACCCTCAACCTCCAGGACCACCTGCTGGGCGGTGCCTCCATT
GACGCCACAGGCAACCCTCTGACTGACGAGGCCCTGGCCGCGGCCAAGAA
TGCCGATGCCGTTCTCCTTGGTGCCATCGGTGGACCGAAATGGGGCACCG
GCGCCGTCCGCCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGC
ACATTCGGCAACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGA
ACACTCCCCCCTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCA
TCCGCGAACTGACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGAC
GGCAGCGGCTACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGA
GCGGATCACGCGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTC
TCCCCGTGTGGAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTG
TGGAGGAAGACCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAA
GATTGAGCACCAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACC
CCCGTCAGCTGAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATC
ATTAGTGATGAGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAG
TGCTAGTTTGAGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTT
ATGAGCCTATTCATGGCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTC
AACCCTGTCGCTGCTATCCTGTCCGTCGCTATGATGATGCAGTACTCTTT
CGGTCGCTTCGATGAGGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCC
TTGAGTCCGGTGTCCGTACCGGTGACATTGGCGGTAAGGCTACCACTAGC
GAGGTTGGTGATGCCGTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAGAT
GCCCGCCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGG
TTACCGCCGAGGCCATCAAGGTCCTCCGCGTCATCGAGAAGAGCCGCGAT
GACATCACCCTCAACCTCCAGGACCACCTGCTGGGCGGTGCCTCCATTGA
CGCCACAGGCAACCCTCTGACTGACGAGGCCCTGGCCGCGGCCAAGAATG
CCGATGCCGTTCTCCTTGGTGCCATCGGTGGACCGAAATGGGGCACCGGC
GCCGTCCGCCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCAC
ATTCGGCAACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAAC
ACTCCCCCCTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATC
CGCGAACTGACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGG
CAGCGGCTACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGC
GGATCACGCGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTC
CCCGTGTGGAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTG
GAGGAAGACCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGA
TTGAGCACCAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCC
CGTCAGCTGAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCAT
TAGTGATGAGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTG
CTAGTTTGAGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTAT
GAGCCTATTCATGGCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAA
CCCTGTCGCTGCTATCCTGTCCGTCGCTATGATGATGCAGTACTCTTTCG
GTCGCTTCGATGAGGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTT
GAGTCCGGTGTCCGTACCGGTGACATTGGCGGTAAGGCTACCACTAGCGA
GGTTGGTGATGCCGTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAGATGC
CCGCCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGTT
ACCGCCGAGGCCATCAAGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGA
CATCACCCTCAACCTCCAGGACCACCTGCTGGGCGGTGCCTCCATTGACG
CCACAGGCAACCCTCTGACTGACGAGGCCCTGGCCGCGGCCAAGAATGCC
GATGCCGTTCTCCTTGGTGCCATCGGTGGACCGAAATGGGGCACCGGCGC
CGTCCGCCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACAT
TCGGCAACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACAC
TCCCCCCTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCG
CGAACTGACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCA
GCGGCTACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGG
ATCACGCGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCC
CGTGTGGAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGA
GGAAGACCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATT
GAGCACCAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCG
TCAGCTGAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTA
GTGATGAGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCT
AGTTTGAGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGA
GCCTATTCATGGCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAACC
CTGTCGCTGCTATCCTGTCCGTCGCTATGATGATGCAGTACTCTTTCGGT
CGCTTCGATGAGGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGA
GTCCGGTGTCCGTACCGGTGACATTGGCGGTAAGGCTACCACTAGCGAGG
TTGGTGATGCCGTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAGATGCCC
GCCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGTTAC
CGCCGAGGCCATCAAGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACA
TCACCCTCAACCTCCAGGACCACCTGCTGGGCGGTGCCTCCATTGACGCC
ACAGGCAACCCTCTGACTGACGAGGCCCTGGCCGCGGCCAAGAATGCCGA
TGCCGTTCTCCTTGGTGCCATCGGTGGACCGAAATGGGGCACCGGCGCCG
TCCGCCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACATTC
GGCAACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACACTC
CCCCCTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCGCG
AACTGACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCAGC
GGCTACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGGAT
CACGCGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCCCG
TGTGGAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGAGG
AAGACCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATTGA
GCACCAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCGTC
AGCTGAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTAGT
GATGAGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCTAG
TTTGAGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGAGC
CTATTCATGGCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAACCCT
GTCGCTGCTATCCTGTCCGTCGCTATGATGATGCAGTACTCTTTCGGTCG
CTTCGATGAGGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGT
CCGGTGTCCGTACCGGTGACATTGGCGGTAAGGCTACCACTAGCGAGGTT
GGTGATGCCGTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAGATGCCCGC
CTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGTTACCG
CCGAGGCCATCAAGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACATC
ACCCTCAACCTCCAGGACCACCTGCTGGGCGGTGCCTCCATTGACGCCAC
AGGCAACCCTCTGACTGACGAGGCCCTGGCCGCGGCCAAGAATGCCGATG
CCGTTCTCCTTGGTGCCATCGGTGGACCGAAATGGGGCACCGGCGCCGTC
CGCCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACATTCGG
CAACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACACTCCC
CCCTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCGCGAA
CTGACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCAGCGG
CTACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGGATCA
CGCGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCCCGTG
TGGAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGAGGAA
GACCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATTGAGC
ACCAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCGTCAG
CTGAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTAGTGA
TGAGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCTAGTT
TGAGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGAGCCT
ATTCATGGCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAACCCTGT
CGCTGCTATCCTGTCCGTCGCTATGATGATGCAGTACTCTTTCGGTCGCT
TCGATGAGGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCC
GGTGTCCGTACCGGTGACATTGGCGGTAAGGCTACCACTAGCGAGGTTGG
TGATGCCGTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAGATGCCCGCCT
ACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGTTACCGCC
GAGGCCATCAAGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACATCAC
CCTCAACCTCCAGGACCACCTGCTGGGCGGTGCCTCCATTGACGCCACAG
GCAACCCTCTGACTGACGAGGCCCTGGCCGCGGCCAAGAATGCCGATGCC
GTTCTCCTTGGTGCCATCGGTGGACCGAAATGGGGCACCGGCGCCGTCCG
CCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACATTCGGCA
ACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACACTCCCCC
CTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCGCGAACT
GACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCAGCGGCT
ACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGGATCACG
CGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCCCGTGTG
GAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGAGGAAGA
CCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATTGAGCAC
CAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCGTCAGCT
GAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTAGTGATG
AGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCTAGTTTG
AGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGAGCCTAT
TCATGGCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAACCCTGTCG
CTGCTATCCTGTCCGTCGCTATGATGATGCAGTACTCTTTCGGTCGCTTC
GATGAGGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCCGG
TGTCCGTACCGGTGACATTGGCGGTAAGGCTACCACTAGCGAGGTTGGTG
ATGCCGTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009098leucine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:00038623-isopropylmalate dehydrogenase activity
GO:0000287magnesium ion binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LEU2AATCC10864_000012Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000012-T1ATCC10864_000012-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000012-T1.exon1ATCC10864_000012-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000012-T1.exon2ATCC10864_000012-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000012-T1.exon3ATCC10864_000012-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000012-T1.exon4ATCC10864_000012-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000012-T1.exon5ATCC10864_000012-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_000012-T1.exon6ATCC10864_000012-T1.exon6Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000012-T1.cdsATCC10864_000012-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004429
PFAMPF00180
InterProIPR024084
InterProIPR019818
Properties
Property NameValue
Product3-isopropylmalate dehydrogenase A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:45495..46934 +
Powered by Drupal