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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000006:103771..104396- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_000035-T1 ID=ATCC10864_000035-T1|Name=ATCC10864_000035-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=626bp|location=Sequence derived from alignment at MCQH01000006:103771..104396- (Aspergillus niger ATCC 10864)
ATGGTGCGCCCACCCCCTTTCCTTCCTCCCCCCTCAATATACACAACAAC
ACCACCACCACCACCAACAATATACTAACAATGGATATTAAATGAATACA
GTCGGACGGAGAAGAGACCCAATCCAACCCCGTTGTCGCCGCCGATGAGG
TCGAGGTTTCGGCCGACGCTGGCGCCGGTGGCCAGATGTCCGTCCTGGAT
GCCCTGAAGGGAGTTCTCCGTATCTCTCTCATCCACGACGGACTTGCCCG
TGGTCTGCGCGAGGCCGCTAAGGCCCTGGACCGTCGTCAGGCTCACATGT
GTGTCCTGAACGAGGGCTGCGAGGAGGAGGCCTACAAGAAGCTTGTTGTG
GCTCTTTGCTCCGAGCACAAGATCCCCCTCATCAAGGTCCCCGATGGAAA
GATGCTTGGCGAGTGGGTTGGTCTTTGTAAGTACCCTTTGGTTCCTTTGA
AGATTTGACCGTGTGGGTGATGTGTTTTGCTAATTGGGGTTTGTGGTATA
GGCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCTTG
CGTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCTCC
TTAACTACTTCCAGACTGAGCAGTAA back to topCoding sequence (CDS) from alignment at MCQH01000006:103771..104396- >ATCC10864_000035-T1 ID=ATCC10864_000035-T1|Name=ATCC10864_000035-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1359bp|location=Sequence derived from alignment at MCQH01000006:103771..104396- (Aspergillus niger ATCC 10864)
GCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCTTGC
GTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCTCCT
TAACTACTTCCAGACTGAGCAGTAATCGGACGGAGAAGAGACCCAATCCA
ACCCCGTTGTCGCCGCCGATGAGGTCGAGGTTTCGGCCGACGCTGGCGCC
GGTGGCCAGATGTCCGTCCTGGATGCCCTGAAGGGAGTTCTCCGTATCTC
TCTCATCCACGACGGACTTGCCCGTGGTCTGCGCGAGGCCGCTAAGGCCC
TGGACCGTCGTCAGGCTCACATGTGTGTCCTGAACGAGGGCTGCGAGGAG
GAGGCCTACAAGAAGCTTGTTGTGGCTCTTTGCTCCGAGCACAAGATCCC
CCTCATCAAGGTCCCCGATGGAAAGATGCTTGGCGAGTGGGTTGGTCTTT
ATGGCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCT
TGCGTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCT
CCTTAACTACTTCCAGACTGAGCAGTAATCGGACGGAGAAGAGACCCAAT
CCAACCCCGTTGTCGCCGCCGATGAGGTCGAGGTTTCGGCCGACGCTGGC
GCCGGTGGCCAGATGTCCGTCCTGGATGCCCTGAAGGGAGTTCTCCGTAT
CTCTCTCATCCACGACGGACTTGCCCGTGGTCTGCGCGAGGCCGCTAAGG
CCCTGGACCGTCGTCAGGCTCACATGTGTGTCCTGAACGAGGGCTGCGAG
GAGGAGGCCTACAAGAAGCTTGTTGTGGCTCTTTGCTCCGAGCACAAGAT
CCCCCTCATCAAGGTCCCCGATGGAAAGATGCTTGGCGAGTGGGTTGGTC
TTTATGGCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGC
TCTTGCGTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGT
CCTCCTTAACTACTTCCAGACTGAGCAGTAATCGGACGGAGAAGAGACCC
AATCCAACCCCGTTGTCGCCGCCGATGAGGTCGAGGTTTCGGCCGACGCT
GGCGCCGGTGGCCAGATGTCCGTCCTGGATGCCCTGAAGGGAGTTCTCCG
TATCTCTCTCATCCACGACGGACTTGCCCGTGGTCTGCGCGAGGCCGCTA
AGGCCCTGGACCGTCGTCAGGCTCACATGTGTGTCCTGAACGAGGGCTGC
GAGGAGGAGGCCTACAAGAAGCTTGTTGTGGCTCTTTGCTCCGAGCACAA
GATCCCCCTCATCAAGGTCCCCGATGGAAAGATGCTTGGCGAGTGGGTTG
GTCTTTATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF01248 |
| InterPro | IPR000530 |
| InterPro | IPR029064 |
| InterPro | IPR004038 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265CN0 |
| Product | 40S ribosomal protein S12 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000006 | supercontig | MCQH01000006:103771..104396 - |
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