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ATCC10864_000049-T1, ATCC10864_000049-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000049-T1
Unique NameATCC10864_000049-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:142510..143627-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000049-T1 ID=ATCC10864_000049-T1|Name=ATCC10864_000049-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1118bp|location=Sequence derived from alignment at MCQH01000006:142510..143627- (Aspergillus niger ATCC 10864)
ATGGGTGGTGTCACCGTTCGCGATGTCGACGTAAGTCATGTCATGTCAAC
TTTTGGAGATTGGTTGGTCGGTGCGGAATGGATGGGATATATGGCATGGC
ATGGTATGGCACGGCACGATCAGGACAAAATGAGAAGAAAAGAACGACAG
GAATGGGAAATACACATGGTATCGGCATTCAACGGAGCAGAAATCGACAT
TTTGATATCGAATTTGGGCGCATGCAGCAAAGCAAGCAAGGCTGGGTACA
TATACTCTGGGCATGAGATGTGATGAGTTTATGGGCTTGGAATGGGAATA
CGCAATGCACGACTACCACGATTGTGTACTCCAGCCATATATTATGGAAT
ATGGGAATTCTGGATGAAATGGATGTTATGGAGTCAGGAACGAACTGGAA
TTCCTGCCGCCGCGACACGCAGAGAAATGTCCAGATTTGCCGATACGTGC
CGTGCCATGCTATATGCCATATCATGCCTGAATGCGCACCTGCCAGACAA
TCTTCAATACACGATGCCTGTGGACGGATCAGCTAACAGGTTTCCTTTTC
CATGGTTATAGGCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAAG
CGTCAGGGAAAGCTCCCCATTCCTGGTTCGTGCACACCGGATTTCATCGA
AAAGTCGTAACAATCAGATCAAAACTAATACGGTTATTAGGATGGGTTGA
CACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACT
GGTACGACAACTGCCATTGATCCAATACTTCGAAAAAAAAAAAAAAAAAA
ACAGCGTGATTAATAGAAATCTGCAATAGGTACTACGTCCGCGCCGCTGC
CGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGGCCGTCTCC
GCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCGCCCACCAC
GTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCCCTCGAGAA
GATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCGCATCACCC
AGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCGTTGACGAG
GAGGAGGACGAGGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000006:142510..143627-

>ATCC10864_000049-T1 ID=ATCC10864_000049-T1|Name=ATCC10864_000049-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1776bp|location=Sequence derived from alignment at MCQH01000006:142510..143627- (Aspergillus niger ATCC 10864)
GTACTACGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGA
CCGTCGGTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGC
GGCTCCCGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAA
GGTCATCCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGA
AGGGTGGCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATC
GCCAAGACCACCGTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGAC
ACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTG
GCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAA
GCTCCCCATTCCTGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTA
CGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCG
GTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCC
CGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCAT
CCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTG
GCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAG
ACCACCGTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTC
AAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAG
AAGTTCATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCC
CATTCCTGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTACGTCCG
CGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTG
GCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCC
GCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTC
CCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCC
GCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACC
GTTGACGAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTCAAGACC
TCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAGAAGTTC
ATCGCTGCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCC
TGATGGGTGGTGTCACCGTTCGCGATGTCGACGTACTACGTCCGCGCCGC
TGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGGCCGTC
TCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCGCCCAC
CACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCCCTCGA
GAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCGCATCA
CCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCGTTGAC
GAGGAGGAGGACGAGGAGTAAGATGGGTTGACACTGTCAAGACCTCCTGC
TCTAACGAGCTCCCTCCCCAGGACGCCGACTGGCGCAGAAGTTCATCGCT
GCTTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGATGG
GTGGTGTCACCGTTCGCGATGTCGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS19ATCC10864_000049Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000049-T1ATCC10864_000049-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000049-T1.cdsATCC10864_000049-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000049-T1.exon4ATCC10864_000049-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000049-T1.exon3ATCC10864_000049-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000049-T1.exon2ATCC10864_000049-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000049-T1.exon1ATCC10864_000049-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036390
InterProIPR036388
InterProIPR001266
PFAMPF01090
Properties
Property NameValue
Product40S ribosomal protein S19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:142510..143627 -
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