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ATCC10864_000077-T1, ATCC10864_000077-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000077-T1
Unique NameATCC10864_000077-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:206847..207534+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000077-T1 ID=ATCC10864_000077-T1|Name=ATCC10864_000077-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=688bp|location=Sequence derived from alignment at MCQH01000006:206847..207534+ (Aspergillus niger ATCC 10864)
ATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAAT
GGTATGATCTGGCTCTATCCTCCCTCTTGTCTCGCCGATTTCTGTCGTGT
GCGTGGACGAGCTCTTGTGAGCCGCATGGGAGCTCGCCATGGATTGCGAC
AGCGTGATGGAACCCAACCAGCTAACGAACCCGGTTCGCTCCCGCAGTGA
CTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTC
CCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGC
TACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAA
GAAGTAATGCTGTCTTTTCCAGCTCCGCCATGCTGCAGCCCAACTAACAC
AACCGTCCTTTCTGCAGGATCTACGAGAACCAGCACCTCCTGGATGCGAC
CGAGATCTTCCGCAAGCTGAACGTCCACAAGAAGGTTAGACTGCACTGTC
CCAATCCCGCTACCAGGGCGGACCGACCGCTGACGCAAACTGCAGGAATC
TTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACA
GCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGA
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Coding sequence (CDS) from alignment at MCQH01000006:206847..207534+

>ATCC10864_000077-T1 ID=ATCC10864_000077-T1|Name=ATCC10864_000077-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1668bp|location=Sequence derived from alignment at MCQH01000006:206847..207534+ (Aspergillus niger ATCC 10864)
ATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAAT
GTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATT
GTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAA
TGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATG
CTAAGAAGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTC
CGCAAGCTGAACGTCCACAAGAAGGAATCTTTCATCAAGCTGGGCTTCCA
CCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTCGCCTTGATCC
GCGACGAGTCTCACTGAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCG
GTGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCAT
GTACAGCGATCTGGAATGTGACTACATCAACCCCATTGATCTGTGCAACC
GCCTCAACGCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACC
TTCCTGTTCATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCC
TCTGTTGGCGTTCAATGCTAAGAAGATCTACGAGAACCAGCACCTCCTGG
ATGCGACCGAGATCTTCCGCAAGCTGAACGTCCACAAGAAGGAATCTTTC
ATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCAT
GATCGTCGCCTTGATCCGCGACGAGTCTCACTGAATGTCCGGTGAAGCCT
GGCTCTATCTGCTGGCGGTGTTGATTAACGCCGTCAACCTGTTCCTGCAG
GTCTTCTTTACTATCATGTACAGCGATCTGGAATGTGACTACATCAACCC
CATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTCCCGAAGCCGCCG
TTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGCTACTGGGTCGCC
ATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAAGAAGATCTACGA
GAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAACGTCC
ACAAGAAGGAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTC
TTCTACCTCTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTG
AATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCG
TCAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAA
TGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACAT
TGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCA
ATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAAT
GCTAAGAAGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATCTT
CCGCAAGCTGAACGTCCACAAGAAGGAATCTTTCATCAAGCTGGGCTTCC
ACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTCGCCTTGATC
CGCGACGAGTCTCACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERV14ATCC10864_000077Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000077-T1.exon1ATCC10864_000077-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000077-T1.exon2ATCC10864_000077-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000077-T1.exon3ATCC10864_000077-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000077-T1.exon4ATCC10864_000077-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000077-T1.cdsATCC10864_000077-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000077-T1ATCC10864_000077-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR003377
InterProIPR033466
PFAMPF03311
Properties
Property NameValue
ProductCOPII-coated vesicle protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:206847..207534 +
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