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ATCC10864_000227-T1, ATCC10864_000227-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000227-T1
Unique NameATCC10864_000227-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:636676..637684-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000227-T1 ID=ATCC10864_000227-T1|Name=ATCC10864_000227-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1009bp|location=Sequence derived from alignment at MCQH01000006:636676..637684- (Aspergillus niger ATCC 10864)
ATGAGCGAACCAACCACAAGTACGGAAACTCCGCAGGATGGCATCAACCG CCAGCTCAGCTGGTATGAGCCCGAGTTGGCGCAGGTCAAGGAGCCTGCAC GTACCATTCTTGCCGAATACAGCAAGATTCCGGAGGAGAAGATCATTGAT CACGTCAAACAAGTGGTAAGAGTATGCCCTTGATACAATCAAACGTATAC TGAATAACGCTGGGTGCAACAGCGAGATCGCGCATTCGCCGTAGTAAGTC TATACTCCCCGCAAACTAGTGACCATCCTTTACTGATCAGACAAGTTCCC CTATCCATGTATCGGATCTTTCCGGTTCCTCGACATATCCATCTGCAACT CATCTGCATACTCTGAAATCCTGTCCCGCTTGAAGGACACCTCCGACATC TACCTGGACTTAGGCTGCGCCATGGGCCAAGACATCAGACACCTTGTACT TCCCCCCCACAGCCAACAACCCCAGGACAGATACTGATCCAAGCAGGTCC ACCAAGGAGCCCCTCAATCCCAAATCTATGGCTCAGACCTCTACTCCAAA TTCATCGACTTGGGATACGAGCTCTTCGCGGACCGCGACACTCTCTCATG CGAATTCATCACCAGCGACATCTTCGACGACAGCAGTGAACTATTCCAGC GTCTTGGGGAGAAGGTAGACATGATCAACGCGGCCTCATTTTTCCACCTC TTCGACTGGGATACCCAGGTAAAGCTGGCTAAGCAGGTCATGAAGCTGAT GAAGCCCAAGCCCGGGTCTATTGTGGTTGGTCGCCATGTGGGTGATTATA ATGCCGGGGAGTTGGAGGCCAAAGAATTGGGCTCGAACATTTGGCGCCAT GATTTGGATTCGTGGAGGAGGTTGTGGGAGCAGGTGGGGAGGGAGACGGG AACGGAGTGGAAGGTCGATGTTACGGGCGAGGAGTGGAAGGGGATTACGA AGGTGGCGCATAATGGGGAGACGACGTTTAAGATGCAGTTTCTTGTGAGG AGGGTTTAA
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Coding sequence (CDS) from alignment at MCQH01000006:636676..637684-

>ATCC10864_000227-T1 ID=ATCC10864_000227-T1|Name=ATCC10864_000227-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3396bp|location=Sequence derived from alignment at MCQH01000006:636676..637684- (Aspergillus niger ATCC 10864)
GTCCACCAAGGAGCCCCTCAATCCCAAATCTATGGCTCAGACCTCTACTC
CAAATTCATCGACTTGGGATACGAGCTCTTCGCGGACCGCGACACTCTCT
CATGCGAATTCATCACCAGCGACATCTTCGACGACAGCAGTGAACTATTC
CAGCGTCTTGGGGAGAAGGTAGACATGATCAACGCGGCCTCATTTTTCCA
CCTCTTCGACTGGGATACCCAGGTAAAGCTGGCTAAGCAGGTCATGAAGC
TGATGAAGCCCAAGCCCGGGTCTATTGTGGTTGGTCGCCATGTGGGTGAT
TATAATGCCGGGGAGTTGGAGGCCAAAGAATTGGGCTCGAACATTTGGCG
CCATGATTTGGATTCGTGGAGGAGGTTGTGGGAGCAGGTGGGGAGGGAGA
CGGGAACGGAGTGGAAGGTCGATGTTACGGGCGAGGAGTGGAAGGGGATT
ACGAAGGTGGCGCATAATGGGGAGACGACGTTTAAGATGCAGTTTCTTGT
GAGGAGGGTTTAATTCCCCTATCCATGTATCGGATCTTTCCGGTTCCTCG
ACATATCCATCTGCAACTCATCTGCATACTCTGAAATCCTGTCCCGCTTG
AAGGACACCTCCGACATCTACCTGGACTTAGGCTGCGCCATGGGCCAAGA
CATCAGACACCTTCGAGATCGCGCATTCGCCGTAATGAGCGAACCAACCA
CAAGTACGGAAACTCCGCAGGATGGCATCAACCGCCAGCTCAGCTGGTAT
GAGCCCGAGTTGGCGCAGGTCAAGGAGCCTGCACGTACCATTCTTGCCGA
ATACAGCAAGATTCCGGAGGAGAAGATCATTGATCACGTCAAACAAGTGG
TCCACCAAGGAGCCCCTCAATCCCAAATCTATGGCTCAGACCTCTACTCC
AAATTCATCGACTTGGGATACGAGCTCTTCGCGGACCGCGACACTCTCTC
ATGCGAATTCATCACCAGCGACATCTTCGACGACAGCAGTGAACTATTCC
AGCGTCTTGGGGAGAAGGTAGACATGATCAACGCGGCCTCATTTTTCCAC
CTCTTCGACTGGGATACCCAGGTAAAGCTGGCTAAGCAGGTCATGAAGCT
GATGAAGCCCAAGCCCGGGTCTATTGTGGTTGGTCGCCATGTGGGTGATT
ATAATGCCGGGGAGTTGGAGGCCAAAGAATTGGGCTCGAACATTTGGCGC
CATGATTTGGATTCGTGGAGGAGGTTGTGGGAGCAGGTGGGGAGGGAGAC
GGGAACGGAGTGGAAGGTCGATGTTACGGGCGAGGAGTGGAAGGGGATTA
CGAAGGTGGCGCATAATGGGGAGACGACGTTTAAGATGCAGTTTCTTGTG
AGGAGGGTTTAATTCCCCTATCCATGTATCGGATCTTTCCGGTTCCTCGA
CATATCCATCTGCAACTCATCTGCATACTCTGAAATCCTGTCCCGCTTGA
AGGACACCTCCGACATCTACCTGGACTTAGGCTGCGCCATGGGCCAAGAC
ATCAGACACCTTCGAGATCGCGCATTCGCCGTAATGAGCGAACCAACCAC
AAGTACGGAAACTCCGCAGGATGGCATCAACCGCCAGCTCAGCTGGTATG
AGCCCGAGTTGGCGCAGGTCAAGGAGCCTGCACGTACCATTCTTGCCGAA
TACAGCAAGATTCCGGAGGAGAAGATCATTGATCACGTCAAACAAGTGGT
CCACCAAGGAGCCCCTCAATCCCAAATCTATGGCTCAGACCTCTACTCCA
AATTCATCGACTTGGGATACGAGCTCTTCGCGGACCGCGACACTCTCTCA
TGCGAATTCATCACCAGCGACATCTTCGACGACAGCAGTGAACTATTCCA
GCGTCTTGGGGAGAAGGTAGACATGATCAACGCGGCCTCATTTTTCCACC
TCTTCGACTGGGATACCCAGGTAAAGCTGGCTAAGCAGGTCATGAAGCTG
ATGAAGCCCAAGCCCGGGTCTATTGTGGTTGGTCGCCATGTGGGTGATTA
TAATGCCGGGGAGTTGGAGGCCAAAGAATTGGGCTCGAACATTTGGCGCC
ATGATTTGGATTCGTGGAGGAGGTTGTGGGAGCAGGTGGGGAGGGAGACG
GGAACGGAGTGGAAGGTCGATGTTACGGGCGAGGAGTGGAAGGGGATTAC
GAAGGTGGCGCATAATGGGGAGACGACGTTTAAGATGCAGTTTCTTGTGA
GGAGGGTTTAATTCCCCTATCCATGTATCGGATCTTTCCGGTTCCTCGAC
ATATCCATCTGCAACTCATCTGCATACTCTGAAATCCTGTCCCGCTTGAA
GGACACCTCCGACATCTACCTGGACTTAGGCTGCGCCATGGGCCAAGACA
TCAGACACCTTCGAGATCGCGCATTCGCCGTAATGAGCGAACCAACCACA
AGTACGGAAACTCCGCAGGATGGCATCAACCGCCAGCTCAGCTGGTATGA
GCCCGAGTTGGCGCAGGTCAAGGAGCCTGCACGTACCATTCTTGCCGAAT
ACAGCAAGATTCCGGAGGAGAAGATCATTGATCACGTCAAACAAGTGGTC
CACCAAGGAGCCCCTCAATCCCAAATCTATGGCTCAGACCTCTACTCCAA
ATTCATCGACTTGGGATACGAGCTCTTCGCGGACCGCGACACTCTCTCAT
GCGAATTCATCACCAGCGACATCTTCGACGACAGCAGTGAACTATTCCAG
CGTCTTGGGGAGAAGGTAGACATGATCAACGCGGCCTCATTTTTCCACCT
CTTCGACTGGGATACCCAGGTAAAGCTGGCTAAGCAGGTCATGAAGCTGA
TGAAGCCCAAGCCCGGGTCTATTGTGGTTGGTCGCCATGTGGGTGATTAT
AATGCCGGGGAGTTGGAGGCCAAAGAATTGGGCTCGAACATTTGGCGCCA
TGATTTGGATTCGTGGAGGAGGTTGTGGGAGCAGGTGGGGAGGGAGACGG
GAACGGAGTGGAAGGTCGATGTTACGGGCGAGGAGTGGAAGGGGATTACG
AAGGTGGCGCATAATGGGGAGACGACGTTTAAGATGCAGTTTCTTGTGAG
GAGGGTTTAATTCCCCTATCCATGTATCGGATCTTTCCGGTTCCTCGACA
TATCCATCTGCAACTCATCTGCATACTCTGAAATCCTGTCCCGCTTGAAG
GACACCTCCGACATCTACCTGGACTTAGGCTGCGCCATGGGCCAAGACAT
CAGACACCTTCGAGATCGCGCATTCGCCGTAATGAGCGAACCAACCACAA
GTACGGAAACTCCGCAGGATGGCATCAACCGCCAGCTCAGCTGGTATGAG
CCCGAGTTGGCGCAGGTCAAGGAGCCTGCACGTACCATTCTTGCCGAATA
CAGCAAGATTCCGGAGGAGAAGATCATTGATCACGTCAAACAAGTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000227ATCC10864_000227Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000227-T1ATCC10864_000227-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000227-T1.cdsATCC10864_000227-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000227-T1.exon4ATCC10864_000227-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000227-T1.exon3ATCC10864_000227-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000227-T1.exon2ATCC10864_000227-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000227-T1.exon1ATCC10864_000227-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF13847
PFAMPF08242
InterProIPR029063
PFAMPF13649
PFAMPF08241
InterProIPR041698
Properties
Property NameValue
NoteantiSMASH:Cluster_1000006.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:636676..637684 -