You are here

Home

ATCC10864_000258-T1, ATCC10864_000258-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000258-T1
Unique NameATCC10864_000258-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:721477..722676-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000258-T1 ID=ATCC10864_000258-T1|Name=ATCC10864_000258-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1200bp|location=Sequence derived from alignment at MCQH01000006:721477..722676- (Aspergillus niger ATCC 10864)
ATGTCGCTCCGCAAAAGGTCTTGCTTATCATGTGTTGCAGCCAAACGTCG
GTGCGACCTGGAAAGACCCAGTTGCGCCCGCTGTCGGAAGAAGAGCGCTG
CGTGTCGGTACCCATACCCGCCTCCACAGAATGCAGAGGATCAGATCACA
GCACCCGAGGACCGCCAACATACCCGTAATGCCATCAACTCTGGTATCTT
GGAAGCAAGCGATATCATGCTTGTAGATAGCCGCATAGACCGATCTACGG
ATCTCTATCCTAGAGAGGAATATTTCGACCCACTCCTATGGTTGCCGGAC
GGTCCGACGAGCCCGGCTCAGGCCTGGGCCATACAACCGGACGAGTGGTT
GTCTCTCGCAAGGGCATTAGATGGATCATCATCCGCATTACTGCCCCGAC
TGGAACGCAGAGTCTTGGAGTTTTGGCCTCGGGTTAACGATACGCAAACC
TGGCGCTTTTGCATCCGAACGTTTCTAGGCTATGTCGATCATTTCTTGAA
CACCGGCACACTGCCTCTCGTTGAGTCACTGTCAACCCGTCAAGGGGATC
TTTCGCCTATCCTGCTGGAAGCCTATGGAGTTTGTGCCGCATATCGCACC
TGTCAGCGTGCAACCCAGCCTTTCTACCTCCAGTTGTTAAAGACAGGAAT
CAATAATGCGGGCACGAGAGACTTGTCGCAAGCGGAACTACAGCATCAAT
TGGATCACCTAAATGCTTTAATTCTTTATTATGTTCTTTTCCTTGCGGGT
GGTGTCAGTGATCAGTCCATGTTTATCCAGCTGGACTACACGTTAGCGCA
GACAACAGCCAATCTAGAACGGAGAGAATTAGAACTTCGGCAGACATCTT
TCGCGAACTACGTGGAGAATCGAGTGCTTTGTGAAAATGCCCGGCGACTC
ATCTTGGTGTCTTACCTGGTGCGTGCTGTCCATGCCGTGGTCCACTTTCA
AAGATGCGACTTCATCAAATATCTGGCTGGTCTACCGGTCTCCACTCAGT
CAAACGCGGATATGTACATAGAGAGGAATTCTAGTGAAGGACAAACCCCT
GCGCAACTGACATCTGGGGTTATGTCCTATGATGAATTCGTGAGTGTCTG
GGAGCAAGGGGGGCTGCTTCATGTGGATGATTTCAGATTCCTTTTGCTGG
TGGCGTGCAAAGGGTTGGACATGGTGCAAGGGAAAGTACTTGGTAGCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000006:721477..722676-

>ATCC10864_000258-T1 ID=ATCC10864_000258-T1|Name=ATCC10864_000258-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1200bp|location=Sequence derived from alignment at MCQH01000006:721477..722676- (Aspergillus niger ATCC 10864)
ATGTCGCTCCGCAAAAGGTCTTGCTTATCATGTGTTGCAGCCAAACGTCG
GTGCGACCTGGAAAGACCCAGTTGCGCCCGCTGTCGGAAGAAGAGCGCTG
CGTGTCGGTACCCATACCCGCCTCCACAGAATGCAGAGGATCAGATCACA
GCACCCGAGGACCGCCAACATACCCGTAATGCCATCAACTCTGGTATCTT
GGAAGCAAGCGATATCATGCTTGTAGATAGCCGCATAGACCGATCTACGG
ATCTCTATCCTAGAGAGGAATATTTCGACCCACTCCTATGGTTGCCGGAC
GGTCCGACGAGCCCGGCTCAGGCCTGGGCCATACAACCGGACGAGTGGTT
GTCTCTCGCAAGGGCATTAGATGGATCATCATCCGCATTACTGCCCCGAC
TGGAACGCAGAGTCTTGGAGTTTTGGCCTCGGGTTAACGATACGCAAACC
TGGCGCTTTTGCATCCGAACGTTTCTAGGCTATGTCGATCATTTCTTGAA
CACCGGCACACTGCCTCTCGTTGAGTCACTGTCAACCCGTCAAGGGGATC
TTTCGCCTATCCTGCTGGAAGCCTATGGAGTTTGTGCCGCATATCGCACC
TGTCAGCGTGCAACCCAGCCTTTCTACCTCCAGTTGTTAAAGACAGGAAT
CAATAATGCGGGCACGAGAGACTTGTCGCAAGCGGAACTACAGCATCAAT
TGGATCACCTAAATGCTTTAATTCTTTATTATGTTCTTTTCCTTGCGGGT
GGTGTCAGTGATCAGTCCATGTTTATCCAGCTGGACTACACGTTAGCGCA
GACAACAGCCAATCTAGAACGGAGAGAATTAGAACTTCGGCAGACATCTT
TCGCGAACTACGTGGAGAATCGAGTGCTTTGTGAAAATGCCCGGCGACTC
ATCTTGGTGTCTTACCTGGTGCGTGCTGTCCATGCCGTGGTCCACTTTCA
AAGATGCGACTTCATCAAATATCTGGCTGGTCTACCGGTCTCCACTCAGT
CAAACGCGGATATGTACATAGAGAGGAATTCTAGTGAAGGACAAACCCCT
GCGCAACTGACATCTGGGGTTATGTCCTATGATGAATTCGTGAGTGTCTG
GGAGCAAGGGGGGCTGCTTCATGTGGATGATTTCAGATTCCTTTTGCTGG
TGGCGTGCAAAGGGTTGGACATGGTGCAAGGGAAAGTACTTGGTAGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000258ATCC10864_000258Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000258-T1.cdsATCC10864_000258-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000258-T1.exon1ATCC10864_000258-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000258-T1ATCC10864_000258-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
PFAMPF00172
InterProIPR036864
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:721477..722676 -
Powered by Drupal