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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000014:91983..93064+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_000536-T1 ID=ATCC10864_000536-T1|Name=ATCC10864_000536-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1082bp|location=Sequence derived from alignment at MCQH01000014:91983..93064+ (Aspergillus niger ATCC 10864)
ATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTACGACATGCCCCTCGT
GGGCTTCGGTCTCTGGAAGGTGAACAACGACACCTGCGCCGACCAGATCT
ACCACGCCATCAAGGAAGGATACCGTCTGTTTGACGGCGCCTGCGGTACT
ACCCTCCCCTCCCCTTATAAATCACTACCAATTCCCAATCTAAACACGCA
AACCAGACTATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCGCGCC
ATTAAAGACGGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCAAGCT
CTGGAACAGCTTCCACGATGGCGACCGCGTCGAGCCCATTTGCCGCAAGC
AGCTCGCTGACTGGGGCATCGACTACTTCGACCTGTACATTGTGCACTTC
CCCATCTCTCTGAAATACGTCGACCCTGCGGTCCGCTACCCGCCGGGCTG
GAAGTCCGAGAAGGACGAACTGGAGTTCGGCAACGCCACGATCCAGGAGA
CCTGGACAGCGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAGCATT
GGTATCAGTAACTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGTATGC
GCGCATTCGTCCTGCCACGCTGCAGATCGAGCATCACCCGTACCTCACGC
AGACAAGATTGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTACGGCG
TATAGTTCTTTTGGTCCGTTGAGTTTCCTCGAGTTGAGTGTGCAGAATGC
GGTGGATTCGCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATTGCCG
AGAAGCACGGAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGACGCAG
AGGGGGATTGCTGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGAAGCA
GAATTTGGATGTTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAGGCTA
TTTCTGGGTTGGATCGCGGGTTGCGGTTCAATGATCCTTTGGGAGTGAGT
TTCCTTCCGCTTTTTATTTGATACGTGGGGATATTTGCTAACTTGATTAT
TACAGTACGGACTCTACGCTCCTATTTTCTAG back to topCoding sequence (CDS) from alignment at MCQH01000014:91983..93064+ >ATCC10864_000536-T1 ID=ATCC10864_000536-T1|Name=ATCC10864_000536-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2880bp|location=Sequence derived from alignment at MCQH01000014:91983..93064+ (Aspergillus niger ATCC 10864)
ATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTACGACATGCCCCTCGT
GGGCTTCGGTCTCTGGAAGGTGAACAACGACACCTGCGCCGACCAGATCT
ACCACGCCATCAAGGAAGGATACCGTCTGTTTGACGGCGCCTGCGACTAT
GGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCGCGCCATTAAAGACGG
TCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCAAGCTCTGGAACAGCT
TCCACGATGGCGACCGCGTCGAGCCCATTTGCCGCAAGCAGCTCGCTGAC
TGGGGCATCGACTACTTCGACCTGTACATTGTGCACTTCCCCATCTCTCT
GAAATACGTCGACCCTGCGGTCCGCTACCCGCCGGGCTGGAAGTCCGAGA
AGGACGAACTGGAGTTCGGCAACGCCACGATCCAGGAGACCTGGACAGCG
ATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAGCATTGGTATCAGTAA
CTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGTATGCGCGCATTCGTC
CTGCCACGCTGCAGATCGAGCATCACCCGTACCTCACGCAGACAAGATTG
GTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTACGGCGTATAGTTCTTT
TGGTCCGTTGAGTTTCCTCGAGTTGAGTGTGCAGAATGCGGTGGATTCGC
CGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATTGCCGAGAAGCACGGA
AGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGACGCAGAGGGGGATTGC
TGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGAAGCAGAATTTGGATG
TTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAGGCTATTTCTGGGTTG
GATCGCGGGTTGCGGTTCAATGATCCTTTGGGATACGGACTCTACGCTCC
TATTTTCTAGATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTACGACA
TGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGACACCTGCGCC
GACCAGATCTACCACGCCATCAAGGAAGGATACCGTCTGTTTGACGGCGC
CTGCGACTATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCGCGCCA
TTAAAGACGGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCAAGCTC
TGGAACAGCTTCCACGATGGCGACCGCGTCGAGCCCATTTGCCGCAAGCA
GCTCGCTGACTGGGGCATCGACTACTTCGACCTGTACATTGTGCACTTCC
CCATCTCTCTGAAATACGTCGACCCTGCGGTCCGCTACCCGCCGGGCTGG
AAGTCCGAGAAGGACGAACTGGAGTTCGGCAACGCCACGATCCAGGAGAC
CTGGACAGCGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAGCATTG
GTATCAGTAACTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGTATGCG
CGCATTCGTCCTGCCACGCTGCAGATCGAGCATCACCCGTACCTCACGCA
GACAAGATTGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTACGGCGT
ATAGTTCTTTTGGTCCGTTGAGTTTCCTCGAGTTGAGTGTGCAGAATGCG
GTGGATTCGCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATTGCCGA
GAAGCACGGAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGACGCAGA
GGGGGATTGCTGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGAAGCAG
AATTTGGATGTTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAGGCTAT
TTCTGGGTTGGATCGCGGGTTGCGGTTCAATGATCCTTTGGGATACGGAC
TCTACGCTCCTATTTTCTAGATGGCCTCTCCCACAGTAAAGCTAAACAGC
GGCTACGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGA
CACCTGCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCGTCTGT
TTGACGGCGCCTGCGACTATGGCAACGAAGTCGAAGCCGGCCAAGGCATC
GCCCGCGCCATTAAAGACGGTCTCGTCAAGCGCGAAGAGCTCTTCATCGT
CTCCAAGCTCTGGAACAGCTTCCACGATGGCGACCGCGTCGAGCCCATTT
GCCGCAAGCAGCTCGCTGACTGGGGCATCGACTACTTCGACCTGTACATT
GTGCACTTCCCCATCTCTCTGAAATACGTCGACCCTGCGGTCCGCTACCC
GCCGGGCTGGAAGTCCGAGAAGGACGAACTGGAGTTCGGCAACGCCACGA
TCCAGGAGACCTGGACAGCGATGGAGTCGCTCGTGGACAAGAAGCTTGCC
CGCAGCATTGGTATCAGTAACTTCTCTGCGCAGCTGGTCATGGATCTGCT
GCGGTATGCGCGCATTCGTCCTGCCACGCTGCAGATCGAGCATCACCCGT
ACCTCACGCAGACAAGATTGGTCGAGTATGCCCAGAAGGAGGGGTTGACG
GTTACGGCGTATAGTTCTTTTGGTCCGTTGAGTTTCCTCGAGTTGAGTGT
GCAGAATGCGGTGGATTCGCCGCCGCTGTTCGAGCATCAGCTTGTTAAGA
GCATTGCCGAGAAGCACGGAAGGACGCCGGCGCAGGTGTTGTTGAGGTGG
GCGACGCAGAGGGGGATTGCTGTTATCCCCAAGAGTAACAACCCTCAGCG
GTTGAAGCAGAATTTGGATGTTACTGGGTGGAATTTGGAGGAGGAGGAGA
TCAAGGCTATTTCTGGGTTGGATCGCGGGTTGCGGTTCAATGATCCTTTG
GGATACGGACTCTACGCTCCTATTTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042843 | D-xylose catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0047834 | D-threo-aldose 1-dehydrogenase activity |
| GO:0032866 | D-xylose:NADP reductase activity |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00248 |
| InterPro | IPR018170 |
| InterPro | IPR044487 |
| InterPro | IPR023210 |
| InterPro | IPR036812 |
| InterPro | IPR020471 |
Properties
| Property Name | Value |
|---|
| Product | NAD(P)H-dependent D-xylose reductase (XR) |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000014 | supercontig | MCQH01000014:91983..93064 + |
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