You are here

Home

ATCC10864_000552-T1, ATCC10864_000552-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000552-T1
Unique NameATCC10864_000552-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000015:20252..21391+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000552-T1 ID=ATCC10864_000552-T1|Name=ATCC10864_000552-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1140bp|location=Sequence derived from alignment at MCQH01000015:20252..21391+ (Aspergillus niger ATCC 10864)
ATGTCGCACGAAGCTCTCAACCCTATTCATCCGTCTGTGCTGCCGCATCT
CGACCCTACCTTCATCGAACTCTATAACAAACATGTAGCCAACACCCCAA
GCGGGCCAATTGATCTCACCGTCCTTCGCTCCAAATATTCCGTTCTCTAC
TCCTATGGTACCGGTCCCGCGCCGGAGCCCGCTCGCGTGTACGACGCCAC
TATCCCAGGCCACAACGGGGATTTAATTCCCTGCCGAGTATATGAGCCCG
ACAGCCCGGGACCATGGCCCGTCCACGTTGACTTTCATGGTGGCGGTACG
TCGCCCATCTACCCATTGTTAATTGGCCTGAAGCTAATCTAGATGCTAGG
CTGGGGCCTCGGGGACCTGGATACTGAATCTCACATCTGCAAGCACATCG
CCGTCAAGGCCAAAGTAGCTGTTGTCGACGTCGCCTACCGACTTGTTCCC
GAACACGCCTTCCCCATCGGCATCCAGGATTCATTCGCTGCACTCCAACA
CTTAGCTTCTCCTGCCGGCCGCGCGCAGTTTCCAAGCCTCGACACCACAC
GCATTTCCCTCGGCGGCGTTTCCGCGGGAGGCAACATCGCACTTATCCTT
GCGCACCTGGCACGGGACCATCAACTTCCTCTCCGTCTTGTAGCGGTAGG
TACTCCCGTAATCGACGACATCTCGGTGTACACTACAGCCCACGACTCGC
CGTTCCCGTCCATGCAGGAGATGGAGCACGCCCCAACCCTGAACTGGGCG
CGCTTAAAATGGTTCGATCAGCTCAAGTGGCGCAGTCTCAGCGAGGACGA
GAATGTGCGCCAGAAGCAGATGGCTGAGGTGAAGTGGTATGCCAATGCGC
TGAAGGCGCCAGACTTCACGCGGCTGCCGCGGACCGTTATCTACACGGCG
GGGTGTGATCCGCTGCGTGATGAGGGTGAGGCGTATGCGCGGAAGTTGGT
CGAGGGAGGGTGTGAGGTCACAGTGAGACGGTTTGAGGGTGTCCCTCATC
CGTTCATGCATATGGATAAAGGTACGTTTTTTCCCCTTCAATTTGTTTGG
TGTTTGTGCTGATAGAAGGTAGATCTCTGGCAGGCACGACAGTTTATAGA
TTTGATTGCAGGACATATTAAGGTGGCGTTGCACGAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000015:20252..21391+

>ATCC10864_000552-T1 ID=ATCC10864_000552-T1|Name=ATCC10864_000552-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3105bp|location=Sequence derived from alignment at MCQH01000015:20252..21391+ (Aspergillus niger ATCC 10864)
ATGTCGCACGAAGCTCTCAACCCTATTCATCCGTCTGTGCTGCCGCATCT
CGACCCTACCTTCATCGAACTCTATAACAAACATGTAGCCAACACCCCAA
GCGGGCCAATTGATCTCACCGTCCTTCGCTCCAAATATTCCGTTCTCTAC
TCCTATGGTACCGGTCCCGCGCCGGAGCCCGCTCGCGTGTACGACGCCAC
TATCCCAGGCCACAACGGGGATTTAATTCCCTGCCGAGTATATGAGCCCG
ACAGCCCGGGACCATGGCCCGTCCACGTTGACTTTCATGGTGGCGGCTGG
GGCCTCGGGGACCTGGATACTGAATCTCACATCTGCAAGCACATCGCCGT
CAAGGCCAAAGTAGCTGTTGTCGACGTCGCCTACCGACTTGTTCCCGAAC
ACGCCTTCCCCATCGGCATCCAGGATTCATTCGCTGCACTCCAACACTTA
GCTTCTCCTGCCGGCCGCGCGCAGTTTCCAAGCCTCGACACCACACGCAT
TTCCCTCGGCGGCGTTTCCGCGGGAGGCAACATCGCACTTATCCTTGCGC
ACCTGGCACGGGACCATCAACTTCCTCTCCGTCTTGTAGCGGTAGGTACT
CCCGTAATCGACGACATCTCGGTGTACACTACAGCCCACGACTCGCCGTT
CCCGTCCATGCAGGAGATGGAGCACGCCCCAACCCTGAACTGGGCGCGCT
TAAAATGGTTCGATCAGCTCAAGTGGCGCAGTCTCAGCGAGGACGAGAAT
GTGCGCCAGAAGCAGATGGCTGAGGTGAAGTGGTATGCCAATGCGCTGAA
GGCGCCAGACTTCACGCGGCTGCCGCGGACCGTTATCTACACGGCGGGGT
GTGATCCGCTGCGTGATGAGGGTGAGGCGTATGCGCGGAAGTTGGTCGAG
GGAGGGTGTGAGGTCACAGTGAGACGGTTTGAGGGTGTCCCTCATCCGTT
CATGCATATGGATAAAGATCTCTGGCAGGCACGACAGTTTATAGATTTGA
TTGCAGGACATATTAAGGTGGCGTTGCACGAATAAATGTCGCACGAAGCT
CTCAACCCTATTCATCCGTCTGTGCTGCCGCATCTCGACCCTACCTTCAT
CGAACTCTATAACAAACATGTAGCCAACACCCCAAGCGGGCCAATTGATC
TCACCGTCCTTCGCTCCAAATATTCCGTTCTCTACTCCTATGGTACCGGT
CCCGCGCCGGAGCCCGCTCGCGTGTACGACGCCACTATCCCAGGCCACAA
CGGGGATTTAATTCCCTGCCGAGTATATGAGCCCGACAGCCCGGGACCAT
GGCCCGTCCACGTTGACTTTCATGGTGGCGGCTGGGGCCTCGGGGACCTG
GATACTGAATCTCACATCTGCAAGCACATCGCCGTCAAGGCCAAAGTAGC
TGTTGTCGACGTCGCCTACCGACTTGTTCCCGAACACGCCTTCCCCATCG
GCATCCAGGATTCATTCGCTGCACTCCAACACTTAGCTTCTCCTGCCGGC
CGCGCGCAGTTTCCAAGCCTCGACACCACACGCATTTCCCTCGGCGGCGT
TTCCGCGGGAGGCAACATCGCACTTATCCTTGCGCACCTGGCACGGGACC
ATCAACTTCCTCTCCGTCTTGTAGCGGTAGGTACTCCCGTAATCGACGAC
ATCTCGGTGTACACTACAGCCCACGACTCGCCGTTCCCGTCCATGCAGGA
GATGGAGCACGCCCCAACCCTGAACTGGGCGCGCTTAAAATGGTTCGATC
AGCTCAAGTGGCGCAGTCTCAGCGAGGACGAGAATGTGCGCCAGAAGCAG
ATGGCTGAGGTGAAGTGGTATGCCAATGCGCTGAAGGCGCCAGACTTCAC
GCGGCTGCCGCGGACCGTTATCTACACGGCGGGGTGTGATCCGCTGCGTG
ATGAGGGTGAGGCGTATGCGCGGAAGTTGGTCGAGGGAGGGTGTGAGGTC
ACAGTGAGACGGTTTGAGGGTGTCCCTCATCCGTTCATGCATATGGATAA
AGATCTCTGGCAGGCACGACAGTTTATAGATTTGATTGCAGGACATATTA
AGGTGGCGTTGCACGAATAAATGTCGCACGAAGCTCTCAACCCTATTCAT
CCGTCTGTGCTGCCGCATCTCGACCCTACCTTCATCGAACTCTATAACAA
ACATGTAGCCAACACCCCAAGCGGGCCAATTGATCTCACCGTCCTTCGCT
CCAAATATTCCGTTCTCTACTCCTATGGTACCGGTCCCGCGCCGGAGCCC
GCTCGCGTGTACGACGCCACTATCCCAGGCCACAACGGGGATTTAATTCC
CTGCCGAGTATATGAGCCCGACAGCCCGGGACCATGGCCCGTCCACGTTG
ACTTTCATGGTGGCGGCTGGGGCCTCGGGGACCTGGATACTGAATCTCAC
ATCTGCAAGCACATCGCCGTCAAGGCCAAAGTAGCTGTTGTCGACGTCGC
CTACCGACTTGTTCCCGAACACGCCTTCCCCATCGGCATCCAGGATTCAT
TCGCTGCACTCCAACACTTAGCTTCTCCTGCCGGCCGCGCGCAGTTTCCA
AGCCTCGACACCACACGCATTTCCCTCGGCGGCGTTTCCGCGGGAGGCAA
CATCGCACTTATCCTTGCGCACCTGGCACGGGACCATCAACTTCCTCTCC
GTCTTGTAGCGGTAGGTACTCCCGTAATCGACGACATCTCGGTGTACACT
ACAGCCCACGACTCGCCGTTCCCGTCCATGCAGGAGATGGAGCACGCCCC
AACCCTGAACTGGGCGCGCTTAAAATGGTTCGATCAGCTCAAGTGGCGCA
GTCTCAGCGAGGACGAGAATGTGCGCCAGAAGCAGATGGCTGAGGTGAAG
TGGTATGCCAATGCGCTGAAGGCGCCAGACTTCACGCGGCTGCCGCGGAC
CGTTATCTACACGGCGGGGTGTGATCCGCTGCGTGATGAGGGTGAGGCGT
ATGCGCGGAAGTTGGTCGAGGGAGGGTGTGAGGTCACAGTGAGACGGTTT
GAGGGTGTCCCTCATCCGTTCATGCATATGGATAAAGATCTCTGGCAGGC
ACGACAGTTTATAGATTTGATTGCAGGACATATTAAGGTGGCGTTGCACG
AATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000552ATCC10864_000552Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000552-T1.exon1ATCC10864_000552-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000552-T1.exon2ATCC10864_000552-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000552-T1.exon3ATCC10864_000552-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000552-T1.cdsATCC10864_000552-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000552-T1ATCC10864_000552-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013094
InterProIPR029058
PFAMPF07859
Properties
Property NameValue
NoteCAZy:CE10
NoteMEROPS:MER0034665
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000015supercontigMCQH01000015:20252..21391 +
Powered by Drupal