You are here

Home

ATCC10864_000737-T1, ATCC10864_000737-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000737-T1
Unique NameATCC10864_000737-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000015:550897..552425+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000737-T1 ID=ATCC10864_000737-T1|Name=ATCC10864_000737-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1529bp|location=Sequence derived from alignment at MCQH01000015:550897..552425+ (Aspergillus niger ATCC 10864)
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCA
TGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATT
CATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATC
ATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATG
CGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCA
TACCATCGGCGCGTCTGATCTGTCCGGTGTTCCGGTCTACACCTATGATG
ACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTC
AGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAAT
TGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGC
GCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGG
TCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATA
CATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCT
TCGATCACAATACTGGCAAGTACCCCATTCTCGACAATCATTGACAACTG
CTAATAATCGACATCCAGATCACGCATCGTACCCTCAGACTGTGCTTGAT
GAAGCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGGA
TGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTCA
AGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAG
GCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCAT
GGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGTG
GTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGC
TATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCAT
GCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCGG
GTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGC
ACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGTC
GACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTGA
CTACTTGGGTCCTTCCGGCCTTGTCTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000015:550897..552425+

>ATCC10864_000737-T1 ID=ATCC10864_000737-T1|Name=ATCC10864_000737-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2952bp|location=Sequence derived from alignment at MCQH01000015:550897..552425+ (Aspergillus niger ATCC 10864)
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCA
TGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATT
CATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATC
ATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATG
CGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCA
TACCATCGGCGCGTCTGATCTGTCCGGTGTTCCGGTCTACACCTATGATG
ACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTC
AGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAAT
TGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGC
GCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGG
TCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATA
CATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCT
TCGATCACAATACTGATCACGCATCGTACCCTCAGACTGTGCTTGATGAA
GCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGGATGT
TGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTCAAGC
AATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAGGCT
GCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCATGGC
GTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGTGGTG
GATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGCTAT
ACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCATGCC
TCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCGGGTG
GCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGCACA
GTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGTCGAC
GGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTGACTA
CTTGGGTCCTTCCGGCCTTGTCTTGAATGAGTTGGATGTTGTGGTATACT
ATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTTGAGAAACGCGCCAC
CGATGCATCTGCGTACTGCTCCGATTCATCGGGTACCTACAAGCTCTCGT
CGATCACGGCCCCAGTTCAGGGAAGTGGCAGCCCGGGCTCAGCATCCACC
TGGAAGCTAAGTATTGACGATACATCATCCGGTCACAAGCAGGCAATCAC
TGGCTTCGGGGCTGCTGTGACCGATGCGACCGTCACGTCTTTTAACACCT
TGTCGAGCTCTACCCTCCAACAGCTCCTCAATGAGTTGATGACTTCCGAT
GGAGCTAATTTCTCTCTCATGCGCCATACCATCGGCGCGTCTGATCTGTC
CGGTGTTCCGGTCTACACCTATGATGACAACGGAAACGAAGCAGACCCCT
CACTTTCCGGCTTCGGTCTCGGCGACCGTGGCACTGCTATGGCGGAAATG
TTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAGGTGCTTGGGTCCCC
GTGGAGTGCGCCCGGATGGATGAAATTGAATGGCGTGATTGATGGCAACG
CGACTGATAACAACCTTAACGATGGCTACCTTACCAGTGGTGGCACGGGA
AGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTCGTGAAATACATCCA
AGCGTACGAAGCATTAGGAGCTACGGTCGATGCCATTACGATTCAGAATG
AGCCGTTAAATAGTCAATCTGGATATCCCACCATGTATGTTTACGACTAT
GAGTCTGCGCAGCTGATCCAAAAATACATTGGACCGGCTCTTGCCGACGC
TGGACTGAGCACGGAAATCTGGGCCTTCGATCACAATACTGATCACGCAT
CGTACCCTCAGACTGTGCTTGATGAAGCAAGTCAATACGTCGACACGGTA
GCCTGGCACTGTTATGCAAAGGATGTTGACTGGACTGTTCTCAGCCAGTT
CTACAGCGCCAACCCTGGGGTCAAGCAATATATGACCGAATGCTGGACAC
CAGCTTCCGGATCATGGCACCAGGCTGCTGATTTTACCATGGGCCCTCTG
CAGAACTATGCGTCGGGGGTCATGGCGTGGACTCTGGGCACGAACACTGA
CGACGGTCCGCATTTGACCAGTGGTGGATGCGACGCCTGTCAGGGCTTGG
TCACCATCAACGATGATGACAGCTATACTCTTAATACTGCCTACTACATG
ATGGCACAGTTTAGCAAGTTCATGCCTCCTGGCGCGACCGTGTTGAACGG
AACGGGGAGCTATACCTACTCGGGTGGCGATGGCGTACAGTCGGTGGCGT
CCCTGAACCCTGATGGAACGCGCACAGTCATTATTGAGAATATATTCAGT
AACGATATTTACTTGACTCTGTCGACGGAGAGCGGAGAGGAGTGGAGTGG
AAATATCCCCAGTGAATCGGTGACTACTTGGGTCCTTCCGGCCTTGTCTT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006665sphingolipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004348glucosylceramidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NEG1ATCC10864_000737Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000737-T1.exon1ATCC10864_000737-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000737-T1.exon2ATCC10864_000737-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000737-T1.cdsATCC10864_000737-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000737-T1ATCC10864_000737-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013780
InterProIPR033452
PFAMPF02055
InterProIPR033453
InterProIPR017853
PFAMPF17189
InterProIPR001139
Properties
Property NameValue
NoteCAZy:GH30
NoteSECRETED:SignalP(1-18)
Product6-beta-D-glucanase neg1
ProductEndo-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000015supercontigMCQH01000015:550897..552425 +
Powered by Drupal