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ATCC10864_000846-T1, ATCC10864_000846-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000846-T1
Unique NameATCC10864_000846-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:161550..162510+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000846-T1 ID=ATCC10864_000846-T1|Name=ATCC10864_000846-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=961bp|location=Sequence derived from alignment at MCQH01000019:161550..162510+ (Aspergillus niger ATCC 10864)
ATGGCCGGTAAGTTCACTCTTGCGCCGCCGCTCTCCTCGATGCGACACCC
CATCTACCTCGTCTGGTGTTTTGCTGCCCCTCCCTGAGGCTCTTAGGCCC
CCTCCACGGCGAACATACAACCACCTTCACATACAATCATGACAGTGAAA
GCTAACGCAATGCCTTAATCATCTAGACTTCCAGAGCATCGCACGTACGT
ATTGTTACCTCCATTCTGGCCCCCGTCCCCCGTCGACCAGGGGATGACCT
GCATGCATCGTCGCATCAGGCAGACCCCTCCGATTCCATCTGCGTCGCAG
ATACCCGAGTCTACCCAATAGACTGCCCATAACATGGCCTAACATATGTC
GCTACGAACAGAGCAATTTGTGCAATTCTACTACCAGACCTTTGACGCGG
ACCGTCAGCAGCTGGCCGGTCTCTACGTATGTTGAATCACCCCGCATTCC
ACCATTTGCAGGCCCGAGGAACTAACCTATATACCCCCAAATCGATAGCG
CGATAACTCTATGCTCACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCC
CCATCATGGAGAAGCTGACGGTTAGTATTATCATCAGCCTTCACTGAGAC
CCATTATCGGCTTACTGACCTATGCAACGTAATCATACAGAGTCTTCCTT
TCCAGAAGGTCCAGCACCAGATCTCCACTCTCGATGCTCAGCCCTCTGTT
AACGGCAGCATCATCGTCATGGTTACCGGTGCCCTTATCGTACGTGCCCT
GCTTTTGTTGGCGGAAGATGCCTTCAATTCCTTCGCGCAAAATGAACCGA
GGTTGGCTTGCTGTTCGTTTGGCTTACTTTTCGCTTTTCTTTTCTTCTTA
TAGGTCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACCTTCACTCT
CAACCCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTTCCGTCTCA
TCATGGGTTAA
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Coding sequence (CDS) from alignment at MCQH01000019:161550..162510+

>ATCC10864_000846-T1 ID=ATCC10864_000846-T1|Name=ATCC10864_000846-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2214bp|location=Sequence derived from alignment at MCQH01000019:161550..162510+ (Aspergillus niger ATCC 10864)
ATGGCCGACTTCCAGAGCATCGCACAGCAATTTGTGCAATTCTACTACCA
GACCTTTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTACCGCGATAACT
CTATGCTCACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATG
GAGAAGCTGACGAGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTCCAC
TCTCGATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCATGGTTACCG
GTGCCCTTATCGTCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACC
TTCACTCTCAACCCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTT
CCGTCTCATCATGGGTTAAATGGCCGACTTCCAGAGCATCGCACAGCAAT
TTGTGCAATTCTACTACCAGACCTTTGACGCGGACCGTCAGCAGCTGGCC
GGTCTCTACCGCGATAACTCTATGCTCACCTTCGAGACTGCCTCCCAGAT
GGGTGTTGCCCCCATCATGGAGAAGCTGACGAGTCTTCCTTTCCAGAAGG
TCCAGCACCAGATCTCCACTCTCGATGCTCAGCCCTCTGTTAACGGCAGC
ATCATCGTCATGGTTACCGGTGCCCTTATCGTCGACGAGGAGCCCCGCCC
CATGAACTACACCCAGACCTTCACTCTCAACCCCGAGGCTGGCAGCTACT
ACGTCTTCAACGACATCTTCCGTCTCATCATGGGTTAAATGGCCGACTTC
CAGAGCATCGCACAGCAATTTGTGCAATTCTACTACCAGACCTTTGACGC
GGACCGTCAGCAGCTGGCCGGTCTCTACCGCGATAACTCTATGCTCACCT
TCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATGGAGAAGCTGACG
AGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTCCACTCTCGATGCTCA
GCCCTCTGTTAACGGCAGCATCATCGTCATGGTTACCGGTGCCCTTATCG
TCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACCTTCACTCTCAAC
CCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTTCCGTCTCATCAT
GGGTTAAATGGCCGACTTCCAGAGCATCGCACAGCAATTTGTGCAATTCT
ACTACCAGACCTTTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTACCGC
GATAACTCTATGCTCACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCC
CATCATGGAGAAGCTGACGAGTCTTCCTTTCCAGAAGGTCCAGCACCAGA
TCTCCACTCTCGATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCATG
GTTACCGGTGCCCTTATCGTCGACGAGGAGCCCCGCCCCATGAACTACAC
CCAGACCTTCACTCTCAACCCCGAGGCTGGCAGCTACTACGTCTTCAACG
ACATCTTCCGTCTCATCATGGGTTAAATGGCCGACTTCCAGAGCATCGCA
CAGCAATTTGTGCAATTCTACTACCAGACCTTTGACGCGGACCGTCAGCA
GCTGGCCGGTCTCTACCGCGATAACTCTATGCTCACCTTCGAGACTGCCT
CCCAGATGGGTGTTGCCCCCATCATGGAGAAGCTGACGAGTCTTCCTTTC
CAGAAGGTCCAGCACCAGATCTCCACTCTCGATGCTCAGCCCTCTGTTAA
CGGCAGCATCATCGTCATGGTTACCGGTGCCCTTATCGTCGACGAGGAGC
CCCGCCCCATGAACTACACCCAGACCTTCACTCTCAACCCCGAGGCTGGC
AGCTACTACGTCTTCAACGACATCTTCCGTCTCATCATGGGTTAAATGGC
CGACTTCCAGAGCATCGCACAGCAATTTGTGCAATTCTACTACCAGACCT
TTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTACCGCGATAACTCTATG
CTCACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATGGAGAA
GCTGACGAGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTCCACTCTCG
ATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCATGGTTACCGGTGCC
CTTATCGTCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACCTTCAC
TCTCAACCCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTTCCGTC
TCATCATGGGTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NTF2ATCC10864_000846Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000846-T1ATCC10864_000846-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000846-T1.exon1ATCC10864_000846-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000846-T1.exon2ATCC10864_000846-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000846-T1.exon3ATCC10864_000846-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000846-T1.exon4ATCC10864_000846-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000846-T1.exon5ATCC10864_000846-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_000846-T1.exon6ATCC10864_000846-T1.exon6Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000846-T1.cdsATCC10864_000846-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF02136
InterProIPR002075
InterProIPR018222
InterProIPR032710
Properties
Property NameValue
NoteBUSCO:EOG09265BCT
ProductNuclear transport factor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:161550..162510 +
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