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ATCC10864_000859-T1, ATCC10864_000859-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000859-T1
Unique NameATCC10864_000859-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:193211..194044+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000859-T1 ID=ATCC10864_000859-T1|Name=ATCC10864_000859-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=834bp|location=Sequence derived from alignment at MCQH01000019:193211..194044+ (Aspergillus niger ATCC 10864)
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTACGGACTTGCC
TTGTTTACCTGATTTATTCTTTGACATGCGAAGCAAGGGATAACTAACAA
CTCATCACTTAGGTATCTACGGACAATGGTTTGTACCGCTCTTCTCTGTT
CCCTTTCTCGCCCGCTGCTGCTCAACTGTGCGCCTTTGCAACATTTGCGA
AAACAAATCATGGTTGCCTGGATCTTCAGCGCTTGGCGCTGTCATGAAAG
GACCTCCATCAGTTGCCGCCTTGGGCAACCGTGTACTCTGAATGATTGCG
CATAAATTTTGGGGGACTGCGACAACAATGGAGCAATAATTATGGCGTCT
ACCGGACTAGTTTGCTAATCGATATCTGACGTAGGACGGGCGTGATCTGC
ATCGTCTTGTGCTTGGCTCTCGGTATCGCCAACATCTTCTCGTTCGACGT
CGTGATCATCATCTTTAGTGTTCTGTGCCTGTGAGTACTCACCTGAATTT
CTTACACTGGTCTCAGACGCTTACAATACACAGCATCTCTGGTTTGATCC
TCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAATATGCCCCACATCACCG
AAGTTCGATGCATTTATCCGACGCTTCACCACAAACTGGATGCGCGCTGC
AATGTATACAGTGATGAGTGTTGTGCAATGGCTTAGTCTTATCAAGTCCG
CTACCAGTTTGATTGCGGCTGCCGTCTTCCTACTCATTGCCGGTTTATTC
TATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCGTCGGCAGCAAGACTTT
GGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
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Coding sequence (CDS) from alignment at MCQH01000019:193211..194044+

>ATCC10864_000859-T1 ID=ATCC10864_000859-T1|Name=ATCC10864_000859-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1800bp|location=Sequence derived from alignment at MCQH01000019:193211..194044+ (Aspergillus niger ATCC 10864)
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTATCTACGGACA
ATGGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCA
ACATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTC
ATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAAT
ATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACAA
ACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCTT
AGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTACT
CATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCG
TCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTATCTACGGACA
ATGGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCA
ACATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTC
ATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAAT
ATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACAA
ACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCTT
AGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTACT
CATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCG
TCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTATCTACGGACA
ATGGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCA
ACATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTC
ATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAAT
ATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACAA
ACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCTT
AGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTACT
CATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCG
TCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
ATGACTCTCGCCGAGGAGCTCCGCTCGAGAAACTTCAGTATCTACGGACA
ATGGACGGGCGTGATCTGCATCGTCTTGTGCTTGGCTCTCGGTATCGCCA
ACATCTTCTCGTTCGACGTCGTGATCATCATCTTTAGTGTTCTGTGCCTC
ATCTCTGGTTTGATCCTCATCTTCGCCGAAGTGCCCTTCCTCCTCAGAAT
ATGCCCCACATCACCGAAGTTCGATGCATTTATCCGACGCTTCACCACAA
ACTGGATGCGCGCTGCAATGTATACAGTGATGAGTGTTGTGCAATGGCTT
AGTCTTATCAAGTCCGCTACCAGTTTGATTGCGGCTGCCGTCTTCCTACT
CATTGCCGGTTTATTCTATGCGCTGGCGGGTCTCAAGAGCCAGGAATTCG
TCGGCAGCAAGACTTTGGGCGGCCAAGGTCTTGCGCAGATGATCGTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TVP18ATCC10864_000859Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000859-T1.exon1ATCC10864_000859-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000859-T1.exon2ATCC10864_000859-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000859-T1.exon3ATCC10864_000859-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000859-T1.exon4ATCC10864_000859-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000859-T1.cdsATCC10864_000859-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000859-T1ATCC10864_000859-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR019365
PFAMPF10233
Properties
Property NameValue
ProductGolgi apparatus membrane protein tvp18
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:193211..194044 +
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