You are here

Home

ATCC10864_000932-T1, ATCC10864_000932-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000932-T1
Unique NameATCC10864_000932-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:406819..408755+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000932-T1 ID=ATCC10864_000932-T1|Name=ATCC10864_000932-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1937bp|location=Sequence derived from alignment at MCQH01000019:406819..408755+ (Aspergillus niger ATCC 10864)
ATGACGACCGCTCTCACCAAAGCCGCGAGACTGAAACCTGAAGTCCGGTT
GGGACAGGCCATCTCCGAGTTCCAAGCGGACTGCTCCTCGCTGGAGAAGG
CAACGCTGCGATCATTCCAGGCTGCTGGAATCCCGCCAGGTATCCGTGAT
GTGATGCAGTTGACTGCAGAGATCAACCGATCGGCTGGCCTCCAAGGACG
ATGTTTCGGATCACGGCTAACCAACATTCTCCAGGCGGTGCAGGAGTTCG
CTGCGCTTGGAGACATTGTCCTGGGCGCTTCGCAGAGCCTCCTAGCCTGT
GGCATCTGGGCATTGGTACGAATGTCACTTCTGGTAAGTATGCTGCAGCA
TGCATGTCACTCGGCGGAAGCCTCTGATGAGGTTCTCAGTCCATCGTCAA
GTACTCGGCCTACTTTGAACAGCTATCGGCCATGCTCATGGCCGTGGGCC
GCTCTGCACCTCGTTATCAACTAATGGGCGCCGTCTATCCAAAGTCACAG
CGTCTCCGAACATCAATGCTGGAATACTTCATCACCGTTGTGCAGCTATG
TCATCATGTCATAAAGTTGAGTCGGAAGACAGCCTTCGGCCAGTGGGCTT
CGACTATGACAACTCCCCTGAAAGGCTACCAATCTGACCTTGAGCTCTGG
GCGGCCGCCATCAAAGAAGAAGTGAATCTGCTTATGGTTCAGCAATTATC
TCTGGAAGCCGAGGATAATTCATGGTTCAGGTCTCAAGTCACTAAACGCT
TTGAATCCCAATCGTACGCAAGAAAACTGAAAGCGCGCCAGCGCGTACTT
GATGCTTGTTCTACGTATGACTATGAACAAGACTGGAAGCGGATCCGCAA
GCTCGGGACTACCACTATGCTGGAGACCTCGGCTGTGTACGCGAATTGGA
AAGCTCAACAATCTCCACAAGGGCTACAATCGCGTACACTCGTGTGTTCA
GGCAAGCTAGGATCGGGAAAGTCCGTCATTCTCGCAAATATGGTGGATGA
CCTCAACTTGGACGTGGGAAGGAAGCCAGTAGTGGCGTACTTCTTCTGCC
AACATGACTCGACGCAAAGCCTGGCCCCGAAAACAGTAATAGGGTCCTTA
GCGCGACAACTGTTGCAATCGGAAAATGACTTCGATGTTGCGCGTGATTT
CTTGGGAGACAAGCGTTCTCTCGAGGTTGACGAGATTCTAAGTTTACTAA
AGCATCTACTGCCGACGCAGTTCGAGGCCGTTTTCATTCTTGACGGATTG
ATGCACTGCGATGCGGAAGCGCGACAAGTCATCTTGACATCTTTACAGGA
GATCCAGAACCTGATCAAGCTGTCATTGTGCGTTTCTGTCAGGCCAGAGC
CCGCCGACTCTCTGCAGGAACTAAAACAGCTCTCGAACCAGCAGTTTCTT
CCCGTTGAGGATAATAAACCCGACATTGATGCTTTCATCAACGCCGAATT
AGAGAGATGTCTCGAATCCGGAAAGCTTGTAATAAACGACCCCGCCCTTA
TTCTTGAGATTCGGGATAGTCTCTCTCAAGGAGCCCAGGGAATGTTCCTG
TGGGCGGCTCTGCAGATAGAAGCCCTGTGTCTTGAGAGAACAGACGCAGA
TATGCGAGAGGCAATTGCCAGTTTACCTAGAGATCTCTCAGCCTTATACA
CTATGATACTAAAAAAATCTAGACTCTCCGACGTCACATATCAATCCAAA
ATTCTGGATCTGGTTGCGATCGCGTGCAGGCCACTGACCACAGAGGAAAT
GAGAGAAGCCCTCAGTGTCGTTCCCTGGGAGACGACCTGGGACCCCGCGA
GGAGATTGAATGACATCCATGCAACATTGGGCTGCTGTGGGAGTCTGCTT
ACTGTAGACGAAGAAAGCTCGAGCATTCGAGTGGTGCATCATAGTGTGAA
AAAAATTATTATTCGACCACACCGGAGGAGGGCTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000019:406819..408755+

>ATCC10864_000932-T1 ID=ATCC10864_000932-T1|Name=ATCC10864_000932-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3762bp|location=Sequence derived from alignment at MCQH01000019:406819..408755+ (Aspergillus niger ATCC 10864)
ATGACGACCGCTCTCACCAAAGCCGCGAGACTGAAACCTGAAGTCCGGTT
GGGACAGGCCATCTCCGAGTTCCAAGCGGACTGCTCCTCGCTGGAGAAGG
CAACGCTGCGATCATTCCAGGCTGCTGGAATCCCGCCAGGTATCCGTGAT
GTGATGCAGTTGACTGCAGAGATCAACCGATCGGCTGGCCTCCAAGGACG
ATGTTTCGGATCACGGCTAACCAACATTCTCCAGGCGGTGCAGGAGTTCG
CTGCGCTTGGAGACATTGTCCTGGGCGCTTCGCAGAGCCTCCTAGCCTGT
GGCATCTGGGCATTGGTACGAATGTCACTTCTGTCCATCGTCAAGTACTC
GGCCTACTTTGAACAGCTATCGGCCATGCTCATGGCCGTGGGCCGCTCTG
CACCTCGTTATCAACTAATGGGCGCCGTCTATCCAAAGTCACAGCGTCTC
CGAACATCAATGCTGGAATACTTCATCACCGTTGTGCAGCTATGTCATCA
TGTCATAAAGTTGAGTCGGAAGACAGCCTTCGGCCAGTGGGCTTCGACTA
TGACAACTCCCCTGAAAGGCTACCAATCTGACCTTGAGCTCTGGGCGGCC
GCCATCAAAGAAGAAGTGAATCTGCTTATGGTTCAGCAATTATCTCTGGA
AGCCGAGGATAATTCATGGTTCAGGTCTCAAGTCACTAAACGCTTTGAAT
CCCAATCGTACGCAAGAAAACTGAAAGCGCGCCAGCGCGTACTTGATGCT
TGTTCTACGTATGACTATGAACAAGACTGGAAGCGGATCCGCAAGCTCGG
GACTACCACTATGCTGGAGACCTCGGCTGTGTACGCGAATTGGAAAGCTC
AACAATCTCCACAAGGGCTACAATCGCGTACACTCGTGTGTTCAGGCAAG
CTAGGATCGGGAAAGTCCGTCATTCTCGCAAATATGGTGGATGACCTCAA
CTTGGACGTGGGAAGGAAGCCAGTAGTGGCGTACTTCTTCTGCCAACATG
ACTCGACGCAAAGCCTGGCCCCGAAAACAGTAATAGGGTCCTTAGCGCGA
CAACTGTTGCAATCGGAAAATGACTTCGATGTTGCGCGTGATTTCTTGGG
AGACAAGCGTTCTCTCGAGGTTGACGAGATTCTAAGTTTACTAAAGCATC
TACTGCCGACGCAGTTCGAGGCCGTTTTCATTCTTGACGGATTGATGCAC
TGCGATGCGGAAGCGCGACAAGTCATCTTGACATCTTTACAGGAGATCCA
GAACCTGATCAAGCTGTCATTGTGCGTTTCTGTCAGGCCAGAGCCCGCCG
ACTCTCTGCAGGAACTAAAACAGCTCTCGAACCAGCAGTTTCTTCCCGTT
GAGGATAATAAACCCGACATTGATGCTTTCATCAACGCCGAATTAGAGAG
ATGTCTCGAATCCGGAAAGCTTGTAATAAACGACCCCGCCCTTATTCTTG
AGATTCGGGATAGTCTCTCTCAAGGAGCCCAGGGAATGTTCCTGTGGGCG
GCTCTGCAGATAGAAGCCCTGTGTCTTGAGAGAACAGACGCAGATATGCG
AGAGGCAATTGCCAGTTTACCTAGAGATCTCTCAGCCTTATACACTATGA
TACTAAAAAAATCTAGACTCTCCGACGTCACATATCAATCCAAAATTCTG
GATCTGGTTGCGATCGCGTGCAGGCCACTGACCACAGAGGAAATGAGAGA
AGCCCTCAGTGTCGTTCCCTGGGAGACGACCTGGGACCCCGCGAGGAGAT
TGAATGACATCCATGCAACATTGGGCTGCTGTGGGAGTCTGCTTACTGTA
GACGAAGAAAGCTCGAGCATTCGAGTGGTGCATCATAGTGTGAAAAAAAT
TATTATTCGACCACACCGGAGGAGGGCTTAAATGACGACCGCTCTCACCA
AAGCCGCGAGACTGAAACCTGAAGTCCGGTTGGGACAGGCCATCTCCGAG
TTCCAAGCGGACTGCTCCTCGCTGGAGAAGGCAACGCTGCGATCATTCCA
GGCTGCTGGAATCCCGCCAGGTATCCGTGATGTGATGCAGTTGACTGCAG
AGATCAACCGATCGGCTGGCCTCCAAGGACGATGTTTCGGATCACGGCTA
ACCAACATTCTCCAGGCGGTGCAGGAGTTCGCTGCGCTTGGAGACATTGT
CCTGGGCGCTTCGCAGAGCCTCCTAGCCTGTGGCATCTGGGCATTGGTAC
GAATGTCACTTCTGTCCATCGTCAAGTACTCGGCCTACTTTGAACAGCTA
TCGGCCATGCTCATGGCCGTGGGCCGCTCTGCACCTCGTTATCAACTAAT
GGGCGCCGTCTATCCAAAGTCACAGCGTCTCCGAACATCAATGCTGGAAT
ACTTCATCACCGTTGTGCAGCTATGTCATCATGTCATAAAGTTGAGTCGG
AAGACAGCCTTCGGCCAGTGGGCTTCGACTATGACAACTCCCCTGAAAGG
CTACCAATCTGACCTTGAGCTCTGGGCGGCCGCCATCAAAGAAGAAGTGA
ATCTGCTTATGGTTCAGCAATTATCTCTGGAAGCCGAGGATAATTCATGG
TTCAGGTCTCAAGTCACTAAACGCTTTGAATCCCAATCGTACGCAAGAAA
ACTGAAAGCGCGCCAGCGCGTACTTGATGCTTGTTCTACGTATGACTATG
AACAAGACTGGAAGCGGATCCGCAAGCTCGGGACTACCACTATGCTGGAG
ACCTCGGCTGTGTACGCGAATTGGAAAGCTCAACAATCTCCACAAGGGCT
ACAATCGCGTACACTCGTGTGTTCAGGCAAGCTAGGATCGGGAAAGTCCG
TCATTCTCGCAAATATGGTGGATGACCTCAACTTGGACGTGGGAAGGAAG
CCAGTAGTGGCGTACTTCTTCTGCCAACATGACTCGACGCAAAGCCTGGC
CCCGAAAACAGTAATAGGGTCCTTAGCGCGACAACTGTTGCAATCGGAAA
ATGACTTCGATGTTGCGCGTGATTTCTTGGGAGACAAGCGTTCTCTCGAG
GTTGACGAGATTCTAAGTTTACTAAAGCATCTACTGCCGACGCAGTTCGA
GGCCGTTTTCATTCTTGACGGATTGATGCACTGCGATGCGGAAGCGCGAC
AAGTCATCTTGACATCTTTACAGGAGATCCAGAACCTGATCAAGCTGTCA
TTGTGCGTTTCTGTCAGGCCAGAGCCCGCCGACTCTCTGCAGGAACTAAA
ACAGCTCTCGAACCAGCAGTTTCTTCCCGTTGAGGATAATAAACCCGACA
TTGATGCTTTCATCAACGCCGAATTAGAGAGATGTCTCGAATCCGGAAAG
CTTGTAATAAACGACCCCGCCCTTATTCTTGAGATTCGGGATAGTCTCTC
TCAAGGAGCCCAGGGAATGTTCCTGTGGGCGGCTCTGCAGATAGAAGCCC
TGTGTCTTGAGAGAACAGACGCAGATATGCGAGAGGCAATTGCCAGTTTA
CCTAGAGATCTCTCAGCCTTATACACTATGATACTAAAAAAATCTAGACT
CTCCGACGTCACATATCAATCCAAAATTCTGGATCTGGTTGCGATCGCGT
GCAGGCCACTGACCACAGAGGAAATGAGAGAAGCCCTCAGTGTCGTTCCC
TGGGAGACGACCTGGGACCCCGCGAGGAGATTGAATGACATCCATGCAAC
ATTGGGCTGCTGTGGGAGTCTGCTTACTGTAGACGAAGAAAGCTCGAGCA
TTCGAGTGGTGCATCATAGTGTGAAAAAAATTATTATTCGACCACACCGG
AGGAGGGCTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000932ATCC10864_000932Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000932-T1.exon1ATCC10864_000932-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000932-T1.exon2ATCC10864_000932-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000932-T1.cdsATCC10864_000932-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000932-T1ATCC10864_000932-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007111
PFAMPF05729
Properties
Property NameValue
NoteantiSMASH:Cluster_1000019.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:406819..408755 +
Powered by Drupal