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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000019:867348..868989+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_001089-T1 ID=ATCC10864_001089-T1|Name=ATCC10864_001089-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1642bp|location=Sequence derived from alignment at MCQH01000019:867348..868989+ (Aspergillus niger ATCC 10864)
ATGGGTCGGAAATTGGGCCTCTTCCGTGCTATCTATCTGGTGTCTGCCAG
CTGCATGGGCTCTTTTGCCTTTGCATTTGACACCGGTGTTATCAGTATGC
TACGCTCTCTTTGTTGTTCGTAATATGTAACAACGAGCTAACCAGAAATT
GGCCAGGCGGTGTTCTTACTCTGTCTTCTTTCCAGAATGACTTCGGATAC
ACAGTGGCTCAGAAAACCTCCGTCAACTCCAATGCCGTGTCCATCCTCCA
GGCAGGTGCCTTTTTCGGCTGCTTTTTCACGACACCCATCGCATCCTACC
TAGGCCGCCGGCTCGGCCTCATCATCAGTTCCCTTGTATTTACCGTCGGT
ACCATCCTACAGGTCGTTAATTCGCATACTCTGGGGACGTTCTATGCTGG
TCGAGTGATAGCTGGTCTTGGTATCGGCGCCGCCACGGTGCTTATTCCCG
TGTATGCGGCTGAAATGTCTCCCAAGGACCTACGTGGCCGACTCGGTTCC
TGCTTCCAGTTGTTCTTTGCCTTGGGAGTTATGGTCGCCTACTGGGTCAC
GTATGCTGTGTCGATAGACCAGCCGTCCGCAACAAAACAATGGCAAATTG
CGTTGGGCTTGCAGCTTCTCCCTTCGTCTCTTCTTCTGTTCGGTATGTGC
ACGGTTAAGGAGAGCGCTCGGTGGCTCGCCTCCAAGGGCAAGATCGAGAA
GGCTAGAGAGTCCCTGAAATGGGTCAGAGGCGGAGAAGAGACTGAGGAGC
TCCAGCAAGAATTCGATGAGATTTTGGCAGGTATTGAAGAAGAAGCTCGA
GTCAAACAAGGATTCACCTTCCGGGAACTGCTGCTTCCCGCGAATCGCTA
CCGGCTGTTCATCGCCTTTACGATTCAGCTAGCGGCGCAACTTACCGGAA
ATACGTCCCTGGCGTATTACGCCACTCAAATCTTTTCCGCCGTTGGTGCA
GGAAACTCAAGTAAGCTGGTGACAGGCTTTTTCGGTGTGGTCAAAGTGGT
CGGTGTCTCTATCTTCCAGATTTTCGTTATGGATCGCATCGGTCGGCGAT
GGCCGTTCATGATTGGCGCCGCCGCAATGGGATCGTTCATGCTCATCATT
GCCTGCATTTTGGCCACGCATCCGACCAGCTCCAGCGACACCGGAAGCGC
CTCGCCAGCTGGAATCGCCATGATTATCATGACATACTGTGAAGCATTCA
GTTACAACATGTCCTGGGGCCCTCTTCCCTGGCTGTACGTGGGAGAGATT
TTTTCGAGCCGCACTCGTGAAATTGGCGTGACCGTTGGCGCAGCGTCACA
ATGGCTTTTCAATTTCATGATGTCGCAGGTCACGCCGCATGCAATTGACA
ACATCGGATGGAGGATGTTTCTAATGTTTGCGATTTTCAACTACGCGATA
GTTGTATATTCTTATGTATTTCTTAAGGAGGTGCGTCCTACGCCCCAAAC
TGCATTATTAAGGAATTTGCTAACAAGGAGCAGACCTCCAAATACTCTCT
CGAGGAAATGCAAGGCGTCTTTGGTGGCAGCGACCCTGCCAAGGATGATA
AACTTACGACTACTGAAACGGCAGATAAGACACATACCAGCGAGGTTGAG
GACAATCAAGGGACCAGCAGTGCAACGCCAAAAGAAGGATAA back to topCoding sequence (CDS) from alignment at MCQH01000019:867348..868989+ >ATCC10864_001089-T1 ID=ATCC10864_001089-T1|Name=ATCC10864_001089-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4581bp|location=Sequence derived from alignment at MCQH01000019:867348..868989+ (Aspergillus niger ATCC 10864)
ATGGGTCGGAAATTGGGCCTCTTCCGTGCTATCTATCTGGTGTCTGCCAG
CTGCATGGGCTCTTTTGCCTTTGCATTTGACACCGGTGTTATCAGCGGTG
TTCTTACTCTGTCTTCTTTCCAGAATGACTTCGGATACACAGTGGCTCAG
AAAACCTCCGTCAACTCCAATGCCGTGTCCATCCTCCAGGCAGGTGCCTT
TTTCGGCTGCTTTTTCACGACACCCATCGCATCCTACCTAGGCCGCCGGC
TCGGCCTCATCATCAGTTCCCTTGTATTTACCGTCGGTACCATCCTACAG
GTCGTTAATTCGCATACTCTGGGGACGTTCTATGCTGGTCGAGTGATAGC
TGGTCTTGGTATCGGCGCCGCCACGGTGCTTATTCCCGTGTATGCGGCTG
AAATGTCTCCCAAGGACCTACGTGGCCGACTCGGTTCCTGCTTCCAGTTG
TTCTTTGCCTTGGGAGTTATGGTCGCCTACTGGGTCACGTATGCTGTGTC
GATAGACCAGCCGTCCGCAACAAAACAATGGCAAATTGCGTTGGGCTTGC
AGCTTCTCCCTTCGTCTCTTCTTCTGTTCGGTATGTGCACGGTTAAGGAG
AGCGCTCGGTGGCTCGCCTCCAAGGGCAAGATCGAGAAGGCTAGAGAGTC
CCTGAAATGGGTCAGAGGCGGAGAAGAGACTGAGGAGCTCCAGCAAGAAT
TCGATGAGATTTTGGCAGGTATTGAAGAAGAAGCTCGAGTCAAACAAGGA
TTCACCTTCCGGGAACTGCTGCTTCCCGCGAATCGCTACCGGCTGTTCAT
CGCCTTTACGATTCAGCTAGCGGCGCAACTTACCGGAAATACGTCCCTGG
CGTATTACGCCACTCAAATCTTTTCCGCCGTTGGTGCAGGAAACTCAAGT
AAGCTGGTGACAGGCTTTTTCGGTGTGGTCAAAGTGGTCGGTGTCTCTAT
CTTCCAGATTTTCGTTATGGATCGCATCGGTCGGCGATGGCCGTTCATGA
TTGGCGCCGCCGCAATGGGATCGTTCATGCTCATCATTGCCTGCATTTTG
GCCACGCATCCGACCAGCTCCAGCGACACCGGAAGCGCCTCGCCAGCTGG
AATCGCCATGATTATCATGACATACTGTGAAGCATTCAGTTACAACATGT
CCTGGGGCCCTCTTCCCTGGCTGTACGTGGGAGAGATTTTTTCGAGCCGC
ACTCGTGAAATTGGCGTGACCGTTGGCGCAGCGTCACAATGGCTTTTCAA
TTTCATGATGTCGCAGGTCACGCCGCATGCAATTGACAACATCGGATGGA
GGATGTTTCTAATGTTTGCGATTTTCAACTACGCGATAGTTGTATATTCT
TATGTATTTCTTAAGGAGACCTCCAAATACTCTCTCGAGGAAATGCAAGG
CGTCTTTGGTGGCAGCGACCCTGCCAAGGATGATAAACTTACGACTACTG
AAACGGCAGATAAGACACATACCAGCGAGGTTGAGGACAATCAAGGGACC
AGCAGTGCAACGCCAAAAGAAGGATAAATGGGTCGGAAATTGGGCCTCTT
CCGTGCTATCTATCTGGTGTCTGCCAGCTGCATGGGCTCTTTTGCCTTTG
CATTTGACACCGGTGTTATCAGCGGTGTTCTTACTCTGTCTTCTTTCCAG
AATGACTTCGGATACACAGTGGCTCAGAAAACCTCCGTCAACTCCAATGC
CGTGTCCATCCTCCAGGCAGGTGCCTTTTTCGGCTGCTTTTTCACGACAC
CCATCGCATCCTACCTAGGCCGCCGGCTCGGCCTCATCATCAGTTCCCTT
GTATTTACCGTCGGTACCATCCTACAGGTCGTTAATTCGCATACTCTGGG
GACGTTCTATGCTGGTCGAGTGATAGCTGGTCTTGGTATCGGCGCCGCCA
CGGTGCTTATTCCCGTGTATGCGGCTGAAATGTCTCCCAAGGACCTACGT
GGCCGACTCGGTTCCTGCTTCCAGTTGTTCTTTGCCTTGGGAGTTATGGT
CGCCTACTGGGTCACGTATGCTGTGTCGATAGACCAGCCGTCCGCAACAA
AACAATGGCAAATTGCGTTGGGCTTGCAGCTTCTCCCTTCGTCTCTTCTT
CTGTTCGGTATGTGCACGGTTAAGGAGAGCGCTCGGTGGCTCGCCTCCAA
GGGCAAGATCGAGAAGGCTAGAGAGTCCCTGAAATGGGTCAGAGGCGGAG
AAGAGACTGAGGAGCTCCAGCAAGAATTCGATGAGATTTTGGCAGGTATT
GAAGAAGAAGCTCGAGTCAAACAAGGATTCACCTTCCGGGAACTGCTGCT
TCCCGCGAATCGCTACCGGCTGTTCATCGCCTTTACGATTCAGCTAGCGG
CGCAACTTACCGGAAATACGTCCCTGGCGTATTACGCCACTCAAATCTTT
TCCGCCGTTGGTGCAGGAAACTCAAGTAAGCTGGTGACAGGCTTTTTCGG
TGTGGTCAAAGTGGTCGGTGTCTCTATCTTCCAGATTTTCGTTATGGATC
GCATCGGTCGGCGATGGCCGTTCATGATTGGCGCCGCCGCAATGGGATCG
TTCATGCTCATCATTGCCTGCATTTTGGCCACGCATCCGACCAGCTCCAG
CGACACCGGAAGCGCCTCGCCAGCTGGAATCGCCATGATTATCATGACAT
ACTGTGAAGCATTCAGTTACAACATGTCCTGGGGCCCTCTTCCCTGGCTG
TACGTGGGAGAGATTTTTTCGAGCCGCACTCGTGAAATTGGCGTGACCGT
TGGCGCAGCGTCACAATGGCTTTTCAATTTCATGATGTCGCAGGTCACGC
CGCATGCAATTGACAACATCGGATGGAGGATGTTTCTAATGTTTGCGATT
TTCAACTACGCGATAGTTGTATATTCTTATGTATTTCTTAAGGAGACCTC
CAAATACTCTCTCGAGGAAATGCAAGGCGTCTTTGGTGGCAGCGACCCTG
CCAAGGATGATAAACTTACGACTACTGAAACGGCAGATAAGACACATACC
AGCGAGGTTGAGGACAATCAAGGGACCAGCAGTGCAACGCCAAAAGAAGG
ATAAATGGGTCGGAAATTGGGCCTCTTCCGTGCTATCTATCTGGTGTCTG
CCAGCTGCATGGGCTCTTTTGCCTTTGCATTTGACACCGGTGTTATCAGC
GGTGTTCTTACTCTGTCTTCTTTCCAGAATGACTTCGGATACACAGTGGC
TCAGAAAACCTCCGTCAACTCCAATGCCGTGTCCATCCTCCAGGCAGGTG
CCTTTTTCGGCTGCTTTTTCACGACACCCATCGCATCCTACCTAGGCCGC
CGGCTCGGCCTCATCATCAGTTCCCTTGTATTTACCGTCGGTACCATCCT
ACAGGTCGTTAATTCGCATACTCTGGGGACGTTCTATGCTGGTCGAGTGA
TAGCTGGTCTTGGTATCGGCGCCGCCACGGTGCTTATTCCCGTGTATGCG
GCTGAAATGTCTCCCAAGGACCTACGTGGCCGACTCGGTTCCTGCTTCCA
GTTGTTCTTTGCCTTGGGAGTTATGGTCGCCTACTGGGTCACGTATGCTG
TGTCGATAGACCAGCCGTCCGCAACAAAACAATGGCAAATTGCGTTGGGC
TTGCAGCTTCTCCCTTCGTCTCTTCTTCTGTTCGGTATGTGCACGGTTAA
GGAGAGCGCTCGGTGGCTCGCCTCCAAGGGCAAGATCGAGAAGGCTAGAG
AGTCCCTGAAATGGGTCAGAGGCGGAGAAGAGACTGAGGAGCTCCAGCAA
GAATTCGATGAGATTTTGGCAGGTATTGAAGAAGAAGCTCGAGTCAAACA
AGGATTCACCTTCCGGGAACTGCTGCTTCCCGCGAATCGCTACCGGCTGT
TCATCGCCTTTACGATTCAGCTAGCGGCGCAACTTACCGGAAATACGTCC
CTGGCGTATTACGCCACTCAAATCTTTTCCGCCGTTGGTGCAGGAAACTC
AAGTAAGCTGGTGACAGGCTTTTTCGGTGTGGTCAAAGTGGTCGGTGTCT
CTATCTTCCAGATTTTCGTTATGGATCGCATCGGTCGGCGATGGCCGTTC
ATGATTGGCGCCGCCGCAATGGGATCGTTCATGCTCATCATTGCCTGCAT
TTTGGCCACGCATCCGACCAGCTCCAGCGACACCGGAAGCGCCTCGCCAG
CTGGAATCGCCATGATTATCATGACATACTGTGAAGCATTCAGTTACAAC
ATGTCCTGGGGCCCTCTTCCCTGGCTGTACGTGGGAGAGATTTTTTCGAG
CCGCACTCGTGAAATTGGCGTGACCGTTGGCGCAGCGTCACAATGGCTTT
TCAATTTCATGATGTCGCAGGTCACGCCGCATGCAATTGACAACATCGGA
TGGAGGATGTTTCTAATGTTTGCGATTTTCAACTACGCGATAGTTGTATA
TTCTTATGTATTTCTTAAGGAGACCTCCAAATACTCTCTCGAGGAAATGC
AAGGCGTCTTTGGTGGCAGCGACCCTGCCAAGGATGATAAACTTACGACT
ACTGAAACGGCAGATAAGACACATACCAGCGAGGTTGAGGACAATCAAGG
GACCAGCAGTGCAACGCCAAAAGAAGGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF07690 |
| InterPro | IPR036259 |
| PFAM | PF00083 |
| InterPro | IPR020846 |
| InterPro | IPR005828 |
| InterPro | IPR003663 |
| InterPro | IPR005829 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000019 | supercontig | MCQH01000019:867348..868989 + |
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