You are here

Home

ATCC10864_001162-T1, ATCC10864_001162-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001162-T1
Unique NameATCC10864_001162-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1059715..1061414-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001162-T1 ID=ATCC10864_001162-T1|Name=ATCC10864_001162-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1700bp|location=Sequence derived from alignment at MCQH01000019:1059715..1061414- (Aspergillus niger ATCC 10864)
ATGTCGACTCCTACCAGTCCCGTGGAGCACAAGCTCCCTCAGCGTTCGGG
GACCGTCACTAGCGCCATGACTCGTCGGACTTCCATGAGTGATGACGAGG
CCATTCCCGGCTCCGATAGCAACGAGGTATGCGATGGGAATAGATTCTCT
GCAATTCTAAGGTAGATGGCTGATGATCTTGCGACTATTCAGACCACGAA
CCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACATGTGTGGATATTTGG
AAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAGTCGCAAGCCAAGGAT
TTCGAGAAGGTTTTGAAGGTGCGCTTGGCTACACTGGGCTCCTCTCAAAG
GGTTGAGCGCCTGTTATACTGATACAATGGATTCCTTGCGTGCAGACTGT
GAACGAACCTCTGCGGGAGAGTCATCATTTCTCCCAGAGCGCCGGCGGCG
TTTCTTCTTGGTTTGAGAACATCCGCGCCAACACTCAGGTAATATTCCCA
GTTACACACACAATGACGACATCGGCTCACAGCTGGCTCTAGGGCATGGT
GAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTCCGTGCTTCCGA
CCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGAAGGAATTGCAG
AATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCTCGTGGCGTCAC
TCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTACACTTGACGCTG
CGTCCCATAACAAGATCGACACCGCCCATGATCCTTACATTCTCCGTCGA
GGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAGAACAACAACCG
TCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTTCGAGGCTCATG
TCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCGTCTACATGGGC
GGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATTCTGTCCTCGGC
GCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCATGACCAGAAACG
ACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCCTCTCCAACATC
ACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTGATCGAGGGTAC
TCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAGCAGCGGCTTCT
ACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGGACAACGACGAT
CTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTGCCCGACTGCAT
CATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGGCAAGGACGTCT
CCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCGAGCTGAGCTTC
AAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACCGTCATCAAGGA
CGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCACCTCGCCAACCA
GCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATGTCGAGAAGGAG
TCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCGGCCACTCCGGC
TGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCTTCCCACCGCTT
CTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGGATAAGGCGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000019:1059715..1061414-

>ATCC10864_001162-T1 ID=ATCC10864_001162-T1|Name=ATCC10864_001162-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6012bp|location=Sequence derived from alignment at MCQH01000019:1059715..1061414- (Aspergillus niger ATCC 10864)
GGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTCCGT
GCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGAAGG
AATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCTCGT
GGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTACACT
TGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTACATTC
TCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAGAAC
AACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTTCGA
GGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCGTCT
ACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATTCTG
TCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCATGAC
CAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCCTCT
CCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTGATC
GAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAGCAG
CGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGGACA
ACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTGCCC
GACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGGCAA
GGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCGAGC
TGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACCGTC
ATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCACCTC
GCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATGTCG
AGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCGGCC
ACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCTTCC
CACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGGATA
AGGCGTGAACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCCCAG
AGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACACTCA
GACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACATGTGTG
GATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAGTCGCAA
GCCAAGGATTTCGAGAAGGTTTTGAAGATGTCGACTCCTACCAGTCCCGT
GGAGCACAAGCTCCCTCAGCGTTCGGGGACCGTCACTAGCGCCATGACTC
GTCGGACTTCCATGAGTGATGACGAGGCCATTCCCGGCTCCGATAGCAAC
GAGGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTC
CGTGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGA
AGGAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCT
CGTGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTAC
ACTTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTACA
TTCTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAG
AACAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTT
CGAGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCG
TCTACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATT
CTGTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCAT
GACCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCC
TCTCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTG
ATCGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAG
CAGCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGG
ACAACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTG
CCCGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGG
CAAGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCG
AGCTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACC
GTCATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCAC
CTCGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATG
TCGAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCG
GCCACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCT
TCCCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGG
ATAAGGCGTGAACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCC
CAGAGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACAC
TCAGACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACATGT
GTGGATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAGTCG
CAAGCCAAGGATTTCGAGAAGGTTTTGAAGATGTCGACTCCTACCAGTCC
CGTGGAGCACAAGCTCCCTCAGCGTTCGGGGACCGTCACTAGCGCCATGA
CTCGTCGGACTTCCATGAGTGATGACGAGGCCATTCCCGGCTCCGATAGC
AACGAGGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGG
TTCCGTGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGT
CGAAGGAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAG
GCTCGTGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGC
TACACTTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTT
ACATTCTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAG
GAGAACAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCA
GTTCGAGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCG
TCGTCTACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGAC
ATTCTGTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTT
CATGACCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCT
CCCTCTCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCC
TTGATCGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTA
CAGCAGCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCA
AGGACAACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTAC
CTGCCCGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAA
GGGCAAGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACA
CCGAGCTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGG
ACCGTCATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGC
CACCTCGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCT
ATGTCGAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCG
CCGGCCACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCAC
TCTTCCCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGG
AGGATAAGGCGTGAACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTC
TCCCAGAGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAA
CACTCAGACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACA
TGTGTGGATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAG
TCGCAAGCCAAGGATTTCGAGAAGGTTTTGAAGATGTCGACTCCTACCAG
TCCCGTGGAGCACAAGCTCCCTCAGCGTTCGGGGACCGTCACTAGCGCCA
TGACTCGTCGGACTTCCATGAGTGATGACGAGGCCATTCCCGGCTCCGAT
AGCAACGAGGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAA
GGGTTCCGTGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCA
AGTCGAAGGAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGAC
AAGGCTCGTGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACAC
GGCTACACTTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATC
CTTACATTCTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATC
GAGGAGAACAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCA
GCAGTTCGAGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGT
TCGTCGTCTACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACG
GACATTCTGTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAA
CTTCATGACCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGC
GCTCCCTCTCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAG
CCCTTGATCGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGG
CTACAGCAGCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGT
TCAAGGACAACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTC
TACCTGCCCGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGT
CAAGGGCAAGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAA
ACACCGAGCTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGG
TGGACCGTCATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCAC
CGCCACCTCGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCG
CCTATGTCGAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAG
TCGCCGGCCACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGG
CACTCTTCCCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTA
CGGAGGATAAGGCGTGAACTGTGAACGAACCTCTGCGGGAGAGTCATCAT
TTCTCCCAGAGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGC
CAACACTCAGACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGC
ACATGTGTGGATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCC
AAGTCGCAAGCCAAGGATTTCGAGAAGGTTTTGAAGATGTCGACTCCTAC
CAGTCCCGTGGAGCACAAGCTCCCTCAGCGTTCGGGGACCGTCACTAGCG
CCATGACTCGTCGGACTTCCATGAGTGATGACGAGGCCATTCCCGGCTCC
GATAGCAACGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001162ATCC10864_001162Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001162-T1ATCC10864_001162-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001162-T1.cdsATCC10864_001162-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001162-T1.exon4ATCC10864_001162-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001162-T1.exon3ATCC10864_001162-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001162-T1.exon2ATCC10864_001162-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001162-T1.exon1ATCC10864_001162-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001849
InterProIPR027267
InterProIPR011993
InterProIPR043453
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1059715..1061414 -
Powered by Drupal