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ATCC10864_001188-T1, ATCC10864_001188-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001188-T1
Unique NameATCC10864_001188-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1161343..1162464-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001188-T1 ID=ATCC10864_001188-T1|Name=ATCC10864_001188-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1122bp|location=Sequence derived from alignment at MCQH01000019:1161343..1162464- (Aspergillus niger ATCC 10864)
ATGGCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAAC
CCTGGGAATTGCCCCTCTAGTTTTCTATCTCGTCCTTGATAGATTTGGCC
CTTTGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAG
ACCGTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGG
GAAGCATCACTGGAATCCATTCGTGCAGAAGCTGTCTCCAAGGCTTAAGG
ATGAGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATT
CACCTGTGTTTGATGCTAGTTGACGATGTATGTATACCGTGGGCCTATAT
AAATACACTCTAACATCAAGCAGATAACCGACAATAGCGACTACCGAAAA
GGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAGAGACAGCAAACCG
CGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCGGTTCC
CCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAGATCCTCGAGGGC
CAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGGGTAGCCTTTCGAC
CGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATTGAAAA
CAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATGGAGGACCAATCG
ATGGACGGGACGATGACTACTCTTGCGTATGGCTCGCTTGGTTTATTGCA
TATCACACCAAGTCTAGCTGAAGCTGAAGCTGACCTTGAGATAGGTGGTG
CTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAATATGCTA
AGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATCGAGAGCTCTCATAT
CCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGGGTCGCCAGTGC
ATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCGTGATTC
AGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGAGT
GCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAACGAGAAGATGAA
TCTAAAGAGCCAGCAGACATAG
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Coding sequence (CDS) from alignment at MCQH01000019:1161343..1162464-

>ATCC10864_001188-T1 ID=ATCC10864_001188-T1|Name=ATCC10864_001188-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3024bp|location=Sequence derived from alignment at MCQH01000019:1161343..1162464- (Aspergillus niger ATCC 10864)
GTGGTGCTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAAT
ATGCTAAGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATCGAGAGCTC
TCATATCCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGGGTCGC
CAGTGCATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCG
TGATTCAGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGCTCAAGTCG
GCGAGTGCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAACGAGAA
GATGAATCTAAAGAGCCAGCAGACATAGATAACCGACAATAGCGACTACC
GAAAAGGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAGAGACAGCA
AACCGCGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCG
GTTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAGATCCTCG
AGGGCCAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGGGTAGCCTT
TCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATT
GAAAACAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATGGAGGACC
AATCGATGGACGGGACGATGACTACTCTTGCATGGCGGCACTGCCGGACG
TTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCTGGGAATTGCCCCTCTA
GTTTTCTATCTCGTCCTTGATAGATTTGGCCCTTTGTGGCCAAACTCCAA
AACTTTCTTGATTGGAAAGAAGAAGCCGGAGACCGTGACATCCTTTGAGT
GCCCATATGCCTACATCCGGCAGATCTATGGGAAGCATCACTGGAATCCA
TTCGTGCAGAAGCTGTCTCCAAGGCTTAAGGATGAGGATCCAGCCAAATA
TAAGATGGTTCTAGAGATAATGGATGCAATTCACCTGTGTTTGATGCTAG
TTGACGATGTGGTGCTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTC
ATCCGAATATGCTAAGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATC
GAGAGCTCTCATATCCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCAT
TGGGTCGCCAGTGCATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGC
ACTTGCCGTGATTCAGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGC
TCAAGTCGGCGAGTGCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGG
AACGAGAAGATGAATCTAAAGAGCCAGCAGACATAGATAACCGACAATAG
CGACTACCGAAAAGGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAG
AGACAGCAAACCGCGCTTACTACCGAGTCACCCAAATTCTCAATGAGACT
GTGCAGCGGTTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGA
GATCCTCGAGGGCCAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGG
GTAGCCTTTCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATG
GCGTCATTGAAAACAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGAT
GGAGGACCAATCGATGGACGGGACGATGACTACTCTTGCATGGCGGCACT
GCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCTGGGAATTG
CCCCTCTAGTTTTCTATCTCGTCCTTGATAGATTTGGCCCTTTGTGGCCA
AACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAGACCGTGACATC
CTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGGGAAGCATCACT
GGAATCCATTCGTGCAGAAGCTGTCTCCAAGGCTTAAGGATGAGGATCCA
GCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATTCACCTGTGTTT
GATGCTAGTTGACGATGTGGTGCTCTCAGCTGCAGAACGATTGCAAAAAT
GTCTACTCATCCGAATATGCTAAGGCCAAGGGAGCACTTGCAGAAGATCT
GCGTAATCGAGAGCTCTCATATCCAATCATTCTCGCGCTGGAAGCCCCCG
AAGGGCATTGGGTCGCCAGTGCATTGGAGACCAGCTCACCGCGCAATATC
CGCAAGGCACTTGCCGTGATTCAGAGCGAGAGAGTGCGCAATGCTTGTTT
CAGGGAGCTCAAGTCGGCGAGTGCTTCGGTCCAGGACTGGTTGGCTATCT
GGGGACGGAACGAGAAGATGAATCTAAAGAGCCAGCAGACATAGATAACC
GACAATAGCGACTACCGAAAAGGCAAGCCAGCAGCTCACCGGATATATGG
CCCTTCAGAGACAGCAAACCGCGCTTACTACCGAGTCACCCAAATTCTCA
ATGAGACTGTGCAGCGGTTCCCCAAGTTAGCCAAGTTCCTGCTACAAAAT
CTGGAAGAGATCCTCGAGGGCCAAGACCTGTCACTGATCTGGCGACGAGA
TGGGCTGGGTAGCCTTTCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACC
GCAAAATGGCGTCATTGAAAACAGGGGCGCTATTCCGGCTGCTGGGGCAA
TTGGTGATGGAGGACCAATCGATGGACGGGACGATGACTACTCTTGCATG
GCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAACCCT
GGGAATTGCCCCTCTAGTTTTCTATCTCGTCCTTGATAGATTTGGCCCTT
TGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAGACC
GTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGGGAA
GCATCACTGGAATCCATTCGTGCAGAAGCTGTCTCCAAGGCTTAAGGATG
AGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATTCAC
CTGTGTTTGATGCTAGTTGACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001188ATCC10864_001188Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001188-T1ATCC10864_001188-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001188-T1.cdsATCC10864_001188-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001188-T1.exon3ATCC10864_001188-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001188-T1.exon2ATCC10864_001188-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001188-T1.exon1ATCC10864_001188-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000092
InterProIPR008949
PFAMPF00348
Properties
Property NameValue
NoteSMCOG1182:Polyprenyl synthetase
NoteantiSMASH:Cluster_1000019.5
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1161343..1162464 -
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