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ATCC10864_001220-T1, ATCC10864_001220-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001220-T1
Unique NameATCC10864_001220-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1253415..1254151+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001220-T1 ID=ATCC10864_001220-T1|Name=ATCC10864_001220-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=737bp|location=Sequence derived from alignment at MCQH01000019:1253415..1254151+ (Aspergillus niger ATCC 10864)
ATGGATCACTCCAGAGATCCCTGCCCCTGGGTTGCTCTTAGCGACTTCGG
TGGTGCTTTCTGCATGGGTGTACGTCACTGGTTCTAGCAATCGATTGTGC
TTGTTACCAATGGGTCAAAACTAAACATATGTTGTGTCTATAGGCAATTG
GTGGTGCTGTCTGGCACGGTGTGAAGGGTTTCAGAAACAGCCCCTACGGA
GAGCGCCGGATAGGTGCCATCACAGCCATCAAGGCTCGTGCGCCTGTTCT
CGGTGGTAACTTCGGTGTTTGGGGTGGTATGTTCTCGACGTTCGACTGTG
CGATCAAGGGTATCAGAAAGAAGGAAGATCCTTACAATGCTAGTATGTTT
CCCGGTCAATCCGTGAGGGATTGCTATCTTGTTTCTATGCGCTTTGAGAT
TGGGTGTCATAGCTAACGATTCACACTTTGCAGTCATTGCTGGTTTCTTC
ACTGGTGGTGCTTTGGCCGTTCGTGGTGGTGTTAAGGCTGCCAGAAACTC
CGCTATCATGTGCGCTGTCTTCCTGGCTGTCATTGAGGGTGTCGGTATCG
GTTTCCAGAGAATGATGGCCGACAACACAAAACTAGAGGTGAGATCATAT
CCCACATTCGTCTCTGATGTCGTGTGGCCACTCGACCTGCAAAGGCTACA
CCTCATTGCTGAAGCTTATTGAGTACTGACTTGCCACTACTTTAGCTTCC
TCCTGCCCCTCCGTCCGGCGACAAGGCCGTCGCTTAA
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Coding sequence (CDS) from alignment at MCQH01000019:1253415..1254151+

>ATCC10864_001220-T1 ID=ATCC10864_001220-T1|Name=ATCC10864_001220-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1860bp|location=Sequence derived from alignment at MCQH01000019:1253415..1254151+ (Aspergillus niger ATCC 10864)
ATGGATCACTCCAGAGATCCCTGCCCCTGGGTTGCTCTTAGCGACTTCGG
TGGTGCTTTCTGCATGGGTGCAATTGGTGGTGCTGTCTGGCACGGTGTGA
AGGGTTTCAGAAACAGCCCCTACGGAGAGCGCCGGATAGGTGCCATCACA
GCCATCAAGGCTCGTGCGCCTGTTCTCGGTGGTAACTTCGGTGTTTGGGG
TGGTATGTTCTCGACGTTCGACTGTGCGATCAAGGGTATCAGAAAGAAGG
AAGATCCTTACAATGCTATCATTGCTGGTTTCTTCACTGGTGGTGCTTTG
GCCGTTCGTGGTGGTGTTAAGGCTGCCAGAAACTCCGCTATCATGTGCGC
TGTCTTCCTGGCTGTCATTGAGGGTGTCGGTATCGGTTTCCAGAGAATGA
TGGCCGACAACACAAAACTAGAGCTTCCTCCTGCCCCTCCGTCCGGCGAC
AAGGCCGTCGCTTAAATGGATCACTCCAGAGATCCCTGCCCCTGGGTTGC
TCTTAGCGACTTCGGTGGTGCTTTCTGCATGGGTGCAATTGGTGGTGCTG
TCTGGCACGGTGTGAAGGGTTTCAGAAACAGCCCCTACGGAGAGCGCCGG
ATAGGTGCCATCACAGCCATCAAGGCTCGTGCGCCTGTTCTCGGTGGTAA
CTTCGGTGTTTGGGGTGGTATGTTCTCGACGTTCGACTGTGCGATCAAGG
GTATCAGAAAGAAGGAAGATCCTTACAATGCTATCATTGCTGGTTTCTTC
ACTGGTGGTGCTTTGGCCGTTCGTGGTGGTGTTAAGGCTGCCAGAAACTC
CGCTATCATGTGCGCTGTCTTCCTGGCTGTCATTGAGGGTGTCGGTATCG
GTTTCCAGAGAATGATGGCCGACAACACAAAACTAGAGCTTCCTCCTGCC
CCTCCGTCCGGCGACAAGGCCGTCGCTTAAATGGATCACTCCAGAGATCC
CTGCCCCTGGGTTGCTCTTAGCGACTTCGGTGGTGCTTTCTGCATGGGTG
CAATTGGTGGTGCTGTCTGGCACGGTGTGAAGGGTTTCAGAAACAGCCCC
TACGGAGAGCGCCGGATAGGTGCCATCACAGCCATCAAGGCTCGTGCGCC
TGTTCTCGGTGGTAACTTCGGTGTTTGGGGTGGTATGTTCTCGACGTTCG
ACTGTGCGATCAAGGGTATCAGAAAGAAGGAAGATCCTTACAATGCTATC
ATTGCTGGTTTCTTCACTGGTGGTGCTTTGGCCGTTCGTGGTGGTGTTAA
GGCTGCCAGAAACTCCGCTATCATGTGCGCTGTCTTCCTGGCTGTCATTG
AGGGTGTCGGTATCGGTTTCCAGAGAATGATGGCCGACAACACAAAACTA
GAGCTTCCTCCTGCCCCTCCGTCCGGCGACAAGGCCGTCGCTTAAATGGA
TCACTCCAGAGATCCCTGCCCCTGGGTTGCTCTTAGCGACTTCGGTGGTG
CTTTCTGCATGGGTGCAATTGGTGGTGCTGTCTGGCACGGTGTGAAGGGT
TTCAGAAACAGCCCCTACGGAGAGCGCCGGATAGGTGCCATCACAGCCAT
CAAGGCTCGTGCGCCTGTTCTCGGTGGTAACTTCGGTGTTTGGGGTGGTA
TGTTCTCGACGTTCGACTGTGCGATCAAGGGTATCAGAAAGAAGGAAGAT
CCTTACAATGCTATCATTGCTGGTTTCTTCACTGGTGGTGCTTTGGCCGT
TCGTGGTGGTGTTAAGGCTGCCAGAAACTCCGCTATCATGTGCGCTGTCT
TCCTGGCTGTCATTGAGGGTGTCGGTATCGGTTTCCAGAGAATGATGGCC
GACAACACAAAACTAGAGCTTCCTCCTGCCCCTCCGTCCGGCGACAAGGC
CGTCGCTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM17ATCC10864_001220Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001220-T1.exon1ATCC10864_001220-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001220-T1.exon2ATCC10864_001220-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001220-T1.exon3ATCC10864_001220-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001220-T1.exon4ATCC10864_001220-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001220-T1.cdsATCC10864_001220-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001220-T1ATCC10864_001220-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF02466
Properties
Property NameValue
NoteBUSCO:EOG09265E6R
Producttranslocase of the inner membrane
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1253415..1254151 +
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