|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000019:1291048..1292959- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_001233-T1 ID=ATCC10864_001233-T1|Name=ATCC10864_001233-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1912bp|location=Sequence derived from alignment at MCQH01000019:1291048..1292959- (Aspergillus niger ATCC 10864) ATGCCTCCGCGCAGTACCCGGAAAGCAGCCTCAACCGCAGTGGCGACTGA
GCCGCCACGCTCCCCCGAACCGGGAGGCAACAAGCGCAAGCCCGACGAAA
CTCAGGAACAAAGCTCCCCGCTACGAAGATCGAAGCGCGTCAAGTCTGTC
GAAGGCCTCGGAACGCAGTCGCCGTCCGGCAAAGCCGCTGCGCGCACAGC
ACCGACCGAATCTGCTGGAAGCCCCAAGGCAACGCCGAGGAAATCTGGTG
GTCAGGTCGTTTCGGTGAAGAAGGAGATTGAGGAGGAAGAGACGATCTCG
GTTGAGGCAGAGGTTGTCGATGAGAACAAAGTCAAGGACGAAGAAGCGGA
TGAGAAGCCGAAGGTAAAGGCCAAGGTTACGAGGAAGAGAAAGACCAAGG
AAGATATCGAGATGGTACCATTGAGGGCGCGCACGCAGGGTCTGCGCATG
TGCGTAGGCGCTCATGTCAGTGCTGCCAAAGGTTGGCATCTACTAGACTC
AATCGTCTTTGATATGATGCTTACGATGCTATGCTACAGGTGTCTTCAAC
GCGGTTCACAACAGCATGCATATTGGGTATGTTCCACTCACCCTCTCAAC
CAGCATCATCTAATCCCTCCCAGTGGCAACGCCTTTGCCCTATTTCTCAA
GTCCCAGCGGAAATGGGACAATCCAGCCCTCCAAGATGACCACCGCGACC
AATTCCGCAACCTCTGCATAGAGCATAAATACGACGGCGCAAAGTGAGCC
TCCCAACCCACACCAACCGAAGAGGAGCCAACCCTAATCTAACTATACCA
GACACATCCTCCCCCACGGCTCCTACCTCGTGAACCTGGCCCAAGAAGAC
AAAGCCAAGGCTAAGCAAGCATATGACGCATTCCTGGACGACCTTCGCCG
CTGCGAAGCCCTAGGAATAACCCTCTACAACTTCCAGTACATCCCCCTCC
CCTACACACCCCATCCTACCAACCCGTACTAACCCCCAAAAACCAGCCCC
GGCAGCGCCAACCAAACCTCCCATGCCTCCGCCATAACCCGCCTCGCCGC
GGCCCTAACCTCCGCCCTCGCCGCCACCAGCACCGTCACGCCGGTGCTCG
AGACCATGTGCGGCCACGGCAGCACAATAGGCGGCTACCTGCACGAATTC
CGAGACATCCTCTCCCAAATCCCTAAAGAATACCATCACCGAATCGGCAT
CTGCATCGACACCTGCCACAGCTTCGCAGCGGGGTACGACCTCGCCTCGC
CCTCGGGATTCGCCTCCTTCATGCAAGAATTCTCCGACGTAATCGGGATC
CAATACCTGCGCGCCCTACACCTGAACGACTCGAAAGCACCACGAGGCAG
TAAACGCGACCTACACGCTAACATCGGCACGGGATTTCTGGGCCTGCGCG
CATTCCATAATGTTATGAACGAGCCGCGGTTCCAAGGGTTACCGATGATT
TTGGAGACGCCGATTGATAGGCCTGAGAGTGAAATCAAAGGTAATGAGGA
GGGGGAGGAGTCACCCAAGGCTGATAAGAAGAAGAAACCGGCTGGGGCTT
CTGCGAAGATGGTACCGGATCATAATGTCTGGGCGGGCGAGATCGCGCTG
CTTGAGTCGCTGATTGGGATGGATCCTGAGGGAGAGGAGTTCCGGGCCTT
GGAGGCGAGGTTGTCTGAGGAAGGGCGGGAGATGCGCGAGAAGCAGATGG
AGCAGTATGAGCGGAAGTTGGAGGCGGAGGCGAAGAAGAAGGAGAAGGCG
AAGGCGAAGGAGGAGAAAGGGCAGAAGACGCTGATGGAGATGATGAATGG
GGGCGGGAAGCCGAAGGGGAAGAATACGAGGGCGAAGAAGGGAAAGGCAG
TGGAGAAGGATGAGAGTGATGAGGGGAGTGATGAGGAGGGGTGTCAGAGT
TGTTCGGAGTAG back to topCoding sequence (CDS) from alignment at MCQH01000019:1291048..1292959- >ATCC10864_001233-T1 ID=ATCC10864_001233-T1|Name=ATCC10864_001233-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=8445bp|location=Sequence derived from alignment at MCQH01000019:1291048..1292959- (Aspergillus niger ATCC 10864) CCCCGGCAGCGCCAACCAAACCTCCCATGCCTCCGCCATAACCCGCCTCG CCGCGGCCCTAACCTCCGCCCTCGCCGCCACCAGCACCGTCACGCCGGTG CTCGAGACCATGTGCGGCCACGGCAGCACAATAGGCGGCTACCTGCACGA ATTCCGAGACATCCTCTCCCAAATCCCTAAAGAATACCATCACCGAATCG GCATCTGCATCGACACCTGCCACAGCTTCGCAGCGGGGTACGACCTCGCC TCGCCCTCGGGATTCGCCTCCTTCATGCAAGAATTCTCCGACGTAATCGG GATCCAATACCTGCGCGCCCTACACCTGAACGACTCGAAAGCACCACGAG GCAGTAAACGCGACCTACACGCTAACATCGGCACGGGATTTCTGGGCCTG CGCGCATTCCATAATGTTATGAACGAGCCGCGGTTCCAAGGGTTACCGAT GATTTTGGAGACGCCGATTGATAGGCCTGAGAGTGAAATCAAAGGTAATG AGGAGGGGGAGGAGTCACCCAAGGCTGATAAGAAGAAGAAACCGGCTGGG GCTTCTGCGAAGATGGTACCGGATCATAATGTCTGGGCGGGCGAGATCGC GCTGCTTGAGTCGCTGATTGGGATGGATCCTGAGGGAGAGGAGTTCCGGG CCTTGGAGGCGAGGTTGTCTGAGGAAGGGCGGGAGATGCGCGAGAAGCAG ATGGAGCAGTATGAGCGGAAGTTGGAGGCGGAGGCGAAGAAGAAGGAGAA GGCGAAGGCGAAGGAGGAGAAAGGGCAGAAGACGCTGATGGAGATGATGA ATGGGGGCGGGAAGCCGAAGGGGAAGAATACGAGGGCGAAGAAGGGAAAG GCAGTGGAGAAGGATGAGAGTGATGAGGGGAGTGATGAGGAGGGGTGTCA GAGTTGTTCGGAGTAGACACATCCTCCCCCACGGCTCCTACCTCGTGAAC CTGGCCCAAGAAGACAAAGCCAAGGCTAAGCAAGCATATGACGCATTCCT GGACGACCTTCGCCGCTGCGAAGCCCTAGGAATAACCCTCTACAACTTCC ATGGCAACGCCTTTGCCCTATTTCTCAAGTCCCAGCGGAAATGGGACAAT CCAGCCCTCCAAGATGACCACCGCGACCAATTCCGCAACCTCTGCATAGA GCATAAATACGACGGCGCAAAGTGTCTTCAACGCGGTTCACAACAGCATG CATATTGGATGCCTCCGCGCAGTACCCGGAAAGCAGCCTCAACCGCAGTG GCGACTGAGCCGCCACGCTCCCCCGAACCGGGAGGCAACAAGCGCAAGCC CGACGAAACTCAGGAACAAAGCTCCCCGCTACGAAGATCGAAGCGCGTCA AGTCTGTCGAAGGCCTCGGAACGCAGTCGCCGTCCGGCAAAGCCGCTGCG CGCACAGCACCGACCGAATCTGCTGGAAGCCCCAAGGCAACGCCGAGGAA ATCTGGTGGTCAGGTCGTTTCGGTGAAGAAGGAGATTGAGGAGGAAGAGA CGATCTCGGTTGAGGCAGAGGTTGTCGATGAGAACAAAGTCAAGGACGAA GAAGCGGATGAGAAGCCGAAGGTAAAGGCCAAGGTTACGAGGAAGAGAAA GACCAAGGAAGATATCGAGATGGTACCATTGAGGGCGCGCACGCAGGGTC TGCGCATGTGCGTAGGCGCTCATGTCAGTGCTGCCAAAGCCCCGGCAGCG CCAACCAAACCTCCCATGCCTCCGCCATAACCCGCCTCGCCGCGGCCCTA ACCTCCGCCCTCGCCGCCACCAGCACCGTCACGCCGGTGCTCGAGACCAT GTGCGGCCACGGCAGCACAATAGGCGGCTACCTGCACGAATTCCGAGACA TCCTCTCCCAAATCCCTAAAGAATACCATCACCGAATCGGCATCTGCATC GACACCTGCCACAGCTTCGCAGCGGGGTACGACCTCGCCTCGCCCTCGGG ATTCGCCTCCTTCATGCAAGAATTCTCCGACGTAATCGGGATCCAATACC TGCGCGCCCTACACCTGAACGACTCGAAAGCACCACGAGGCAGTAAACGC GACCTACACGCTAACATCGGCACGGGATTTCTGGGCCTGCGCGCATTCCA TAATGTTATGAACGAGCCGCGGTTCCAAGGGTTACCGATGATTTTGGAGA CGCCGATTGATAGGCCTGAGAGTGAAATCAAAGGTAATGAGGAGGGGGAG GAGTCACCCAAGGCTGATAAGAAGAAGAAACCGGCTGGGGCTTCTGCGAA GATGGTACCGGATCATAATGTCTGGGCGGGCGAGATCGCGCTGCTTGAGT CGCTGATTGGGATGGATCCTGAGGGAGAGGAGTTCCGGGCCTTGGAGGCG AGGTTGTCTGAGGAAGGGCGGGAGATGCGCGAGAAGCAGATGGAGCAGTA TGAGCGGAAGTTGGAGGCGGAGGCGAAGAAGAAGGAGAAGGCGAAGGCGA AGGAGGAGAAAGGGCAGAAGACGCTGATGGAGATGATGAATGGGGGCGGG AAGCCGAAGGGGAAGAATACGAGGGCGAAGAAGGGAAAGGCAGTGGAGAA GGATGAGAGTGATGAGGGGAGTGATGAGGAGGGGTGTCAGAGTTGTTCGG AGTAGACACATCCTCCCCCACGGCTCCTACCTCGTGAACCTGGCCCAAGA AGACAAAGCCAAGGCTAAGCAAGCATATGACGCATTCCTGGACGACCTTC GCCGCTGCGAAGCCCTAGGAATAACCCTCTACAACTTCCATGGCAACGCC TTTGCCCTATTTCTCAAGTCCCAGCGGAAATGGGACAATCCAGCCCTCCA AGATGACCACCGCGACCAATTCCGCAACCTCTGCATAGAGCATAAATACG ACGGCGCAAAGTGTCTTCAACGCGGTTCACAACAGCATGCATATTGGATG CCTCCGCGCAGTACCCGGAAAGCAGCCTCAACCGCAGTGGCGACTGAGCC GCCACGCTCCCCCGAACCGGGAGGCAACAAGCGCAAGCCCGACGAAACTC AGGAACAAAGCTCCCCGCTACGAAGATCGAAGCGCGTCAAGTCTGTCGAA GGCCTCGGAACGCAGTCGCCGTCCGGCAAAGCCGCTGCGCGCACAGCACC GACCGAATCTGCTGGAAGCCCCAAGGCAACGCCGAGGAAATCTGGTGGTC AGGTCGTTTCGGTGAAGAAGGAGATTGAGGAGGAAGAGACGATCTCGGTT GAGGCAGAGGTTGTCGATGAGAACAAAGTCAAGGACGAAGAAGCGGATGA GAAGCCGAAGGTAAAGGCCAAGGTTACGAGGAAGAGAAAGACCAAGGAAG ATATCGAGATGGTACCATTGAGGGCGCGCACGCAGGGTCTGCGCATGTGC GTAGGCGCTCATGTCAGTGCTGCCAAAGCCCCGGCAGCGCCAACCAAACC TCCCATGCCTCCGCCATAACCCGCCTCGCCGCGGCCCTAACCTCCGCCCT CGCCGCCACCAGCACCGTCACGCCGGTGCTCGAGACCATGTGCGGCCACG GCAGCACAATAGGCGGCTACCTGCACGAATTCCGAGACATCCTCTCCCAA ATCCCTAAAGAATACCATCACCGAATCGGCATCTGCATCGACACCTGCCA CAGCTTCGCAGCGGGGTACGACCTCGCCTCGCCCTCGGGATTCGCCTCCT TCATGCAAGAATTCTCCGACGTAATCGGGATCCAATACCTGCGCGCCCTA CACCTGAACGACTCGAAAGCACCACGAGGCAGTAAACGCGACCTACACGC TAACATCGGCACGGGATTTCTGGGCCTGCGCGCATTCCATAATGTTATGA ACGAGCCGCGGTTCCAAGGGTTACCGATGATTTTGGAGACGCCGATTGAT AGGCCTGAGAGTGAAATCAAAGGTAATGAGGAGGGGGAGGAGTCACCCAA GGCTGATAAGAAGAAGAAACCGGCTGGGGCTTCTGCGAAGATGGTACCGG ATCATAATGTCTGGGCGGGCGAGATCGCGCTGCTTGAGTCGCTGATTGGG ATGGATCCTGAGGGAGAGGAGTTCCGGGCCTTGGAGGCGAGGTTGTCTGA GGAAGGGCGGGAGATGCGCGAGAAGCAGATGGAGCAGTATGAGCGGAAGT TGGAGGCGGAGGCGAAGAAGAAGGAGAAGGCGAAGGCGAAGGAGGAGAAA GGGCAGAAGACGCTGATGGAGATGATGAATGGGGGCGGGAAGCCGAAGGG GAAGAATACGAGGGCGAAGAAGGGAAAGGCAGTGGAGAAGGATGAGAGTG ATGAGGGGAGTGATGAGGAGGGGTGTCAGAGTTGTTCGGAGTAGACACAT CCTCCCCCACGGCTCCTACCTCGTGAACCTGGCCCAAGAAGACAAAGCCA AGGCTAAGCAAGCATATGACGCATTCCTGGACGACCTTCGCCGCTGCGAA GCCCTAGGAATAACCCTCTACAACTTCCATGGCAACGCCTTTGCCCTATT TCTCAAGTCCCAGCGGAAATGGGACAATCCAGCCCTCCAAGATGACCACC GCGACCAATTCCGCAACCTCTGCATAGAGCATAAATACGACGGCGCAAAG TGTCTTCAACGCGGTTCACAACAGCATGCATATTGGATGCCTCCGCGCAG TACCCGGAAAGCAGCCTCAACCGCAGTGGCGACTGAGCCGCCACGCTCCC CCGAACCGGGAGGCAACAAGCGCAAGCCCGACGAAACTCAGGAACAAAGC TCCCCGCTACGAAGATCGAAGCGCGTCAAGTCTGTCGAAGGCCTCGGAAC GCAGTCGCCGTCCGGCAAAGCCGCTGCGCGCACAGCACCGACCGAATCTG CTGGAAGCCCCAAGGCAACGCCGAGGAAATCTGGTGGTCAGGTCGTTTCG GTGAAGAAGGAGATTGAGGAGGAAGAGACGATCTCGGTTGAGGCAGAGGT TGTCGATGAGAACAAAGTCAAGGACGAAGAAGCGGATGAGAAGCCGAAGG TAAAGGCCAAGGTTACGAGGAAGAGAAAGACCAAGGAAGATATCGAGATG GTACCATTGAGGGCGCGCACGCAGGGTCTGCGCATGTGCGTAGGCGCTCA TGTCAGTGCTGCCAAAGCCCCGGCAGCGCCAACCAAACCTCCCATGCCTC CGCCATAACCCGCCTCGCCGCGGCCCTAACCTCCGCCCTCGCCGCCACCA GCACCGTCACGCCGGTGCTCGAGACCATGTGCGGCCACGGCAGCACAATA GGCGGCTACCTGCACGAATTCCGAGACATCCTCTCCCAAATCCCTAAAGA ATACCATCACCGAATCGGCATCTGCATCGACACCTGCCACAGCTTCGCAG CGGGGTACGACCTCGCCTCGCCCTCGGGATTCGCCTCCTTCATGCAAGAA TTCTCCGACGTAATCGGGATCCAATACCTGCGCGCCCTACACCTGAACGA CTCGAAAGCACCACGAGGCAGTAAACGCGACCTACACGCTAACATCGGCA CGGGATTTCTGGGCCTGCGCGCATTCCATAATGTTATGAACGAGCCGCGG TTCCAAGGGTTACCGATGATTTTGGAGACGCCGATTGATAGGCCTGAGAG TGAAATCAAAGGTAATGAGGAGGGGGAGGAGTCACCCAAGGCTGATAAGA AGAAGAAACCGGCTGGGGCTTCTGCGAAGATGGTACCGGATCATAATGTC TGGGCGGGCGAGATCGCGCTGCTTGAGTCGCTGATTGGGATGGATCCTGA GGGAGAGGAGTTCCGGGCCTTGGAGGCGAGGTTGTCTGAGGAAGGGCGGG AGATGCGCGAGAAGCAGATGGAGCAGTATGAGCGGAAGTTGGAGGCGGAG GCGAAGAAGAAGGAGAAGGCGAAGGCGAAGGAGGAGAAAGGGCAGAAGAC GCTGATGGAGATGATGAATGGGGGCGGGAAGCCGAAGGGGAAGAATACGA GGGCGAAGAAGGGAAAGGCAGTGGAGAAGGATGAGAGTGATGAGGGGAGT GATGAGGAGGGGTGTCAGAGTTGTTCGGAGTAGACACATCCTCCCCCACG GCTCCTACCTCGTGAACCTGGCCCAAGAAGACAAAGCCAAGGCTAAGCAA GCATATGACGCATTCCTGGACGACCTTCGCCGCTGCGAAGCCCTAGGAAT AACCCTCTACAACTTCCATGGCAACGCCTTTGCCCTATTTCTCAAGTCCC AGCGGAAATGGGACAATCCAGCCCTCCAAGATGACCACCGCGACCAATTC CGCAACCTCTGCATAGAGCATAAATACGACGGCGCAAAGTGTCTTCAACG CGGTTCACAACAGCATGCATATTGGATGCCTCCGCGCAGTACCCGGAAAG CAGCCTCAACCGCAGTGGCGACTGAGCCGCCACGCTCCCCCGAACCGGGA GGCAACAAGCGCAAGCCCGACGAAACTCAGGAACAAAGCTCCCCGCTACG AAGATCGAAGCGCGTCAAGTCTGTCGAAGGCCTCGGAACGCAGTCGCCGT CCGGCAAAGCCGCTGCGCGCACAGCACCGACCGAATCTGCTGGAAGCCCC AAGGCAACGCCGAGGAAATCTGGTGGTCAGGTCGTTTCGGTGAAGAAGGA GATTGAGGAGGAAGAGACGATCTCGGTTGAGGCAGAGGTTGTCGATGAGA ACAAAGTCAAGGACGAAGAAGCGGATGAGAAGCCGAAGGTAAAGGCCAAG GTTACGAGGAAGAGAAAGACCAAGGAAGATATCGAGATGGTACCATTGAG GGCGCGCACGCAGGGTCTGCGCATGTGCGTAGGCGCTCATGTCAGTGCTG CCAAAGCCCCGGCAGCGCCAACCAAACCTCCCATGCCTCCGCCATAACCC GCCTCGCCGCGGCCCTAACCTCCGCCCTCGCCGCCACCAGCACCGTCACG CCGGTGCTCGAGACCATGTGCGGCCACGGCAGCACAATAGGCGGCTACCT GCACGAATTCCGAGACATCCTCTCCCAAATCCCTAAAGAATACCATCACC GAATCGGCATCTGCATCGACACCTGCCACAGCTTCGCAGCGGGGTACGAC CTCGCCTCGCCCTCGGGATTCGCCTCCTTCATGCAAGAATTCTCCGACGT AATCGGGATCCAATACCTGCGCGCCCTACACCTGAACGACTCGAAAGCAC CACGAGGCAGTAAACGCGACCTACACGCTAACATCGGCACGGGATTTCTG GGCCTGCGCGCATTCCATAATGTTATGAACGAGCCGCGGTTCCAAGGGTT ACCGATGATTTTGGAGACGCCGATTGATAGGCCTGAGAGTGAAATCAAAG GTAATGAGGAGGGGGAGGAGTCACCCAAGGCTGATAAGAAGAAGAAACCG GCTGGGGCTTCTGCGAAGATGGTACCGGATCATAATGTCTGGGCGGGCGA GATCGCGCTGCTTGAGTCGCTGATTGGGATGGATCCTGAGGGAGAGGAGT TCCGGGCCTTGGAGGCGAGGTTGTCTGAGGAAGGGCGGGAGATGCGCGAG AAGCAGATGGAGCAGTATGAGCGGAAGTTGGAGGCGGAGGCGAAGAAGAA GGAGAAGGCGAAGGCGAAGGAGGAGAAAGGGCAGAAGACGCTGATGGAGA TGATGAATGGGGGCGGGAAGCCGAAGGGGAAGAATACGAGGGCGAAGAAG GGAAAGGCAGTGGAGAAGGATGAGAGTGATGAGGGGAGTGATGAGGAGGG GTGTCAGAGTTGTTCGGAGTAGACACATCCTCCCCCACGGCTCCTACCTC GTGAACCTGGCCCAAGAAGACAAAGCCAAGGCTAAGCAAGCATATGACGC ATTCCTGGACGACCTTCGCCGCTGCGAAGCCCTAGGAATAACCCTCTACA ACTTCCATGGCAACGCCTTTGCCCTATTTCTCAAGTCCCAGCGGAAATGG GACAATCCAGCCCTCCAAGATGACCACCGCGACCAATTCCGCAACCTCTG CATAGAGCATAAATACGACGGCGCAAAGTGTCTTCAACGCGGTTCACAAC AGCATGCATATTGGATGCCTCCGCGCAGTACCCGGAAAGCAGCCTCAACC GCAGTGGCGACTGAGCCGCCACGCTCCCCCGAACCGGGAGGCAACAAGCG CAAGCCCGACGAAACTCAGGAACAAAGCTCCCCGCTACGAAGATCGAAGC GCGTCAAGTCTGTCGAAGGCCTCGGAACGCAGTCGCCGTCCGGCAAAGCC GCTGCGCGCACAGCACCGACCGAATCTGCTGGAAGCCCCAAGGCAACGCC GAGGAAATCTGGTGGTCAGGTCGTTTCGGTGAAGAAGGAGATTGAGGAGG AAGAGACGATCTCGGTTGAGGCAGAGGTTGTCGATGAGAACAAAGTCAAG GACGAAGAAGCGGATGAGAAGCCGAAGGTAAAGGCCAAGGTTACGAGGAA GAGAAAGACCAAGGAAGATATCGAGATGGTACCATTGAGGGCGCGCACGC AGGGTCTGCGCATGTGCGTAGGCGCTCATGTCAGTGCTGCCAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
| GO:0006281 | DNA repair |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
| InterPro | IPR001719 |
| InterPro | IPR018246 |
| PFAM | PF01261 |
| InterPro | IPR036237 |
| InterPro | IPR013022 |
Properties
| Property Name | Value |
| Note | BUSCO:EOG09262XMN |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| MCQH01000019 | supercontig | MCQH01000019:1291048..1292959 - |
|