You are here

Home

ATCC10864_001421-T1, ATCC10864_001421-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001421-T1
Unique NameATCC10864_001421-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:358892..359288-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001421-T1 ID=ATCC10864_001421-T1|Name=ATCC10864_001421-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=397bp|location=Sequence derived from alignment at MCQH01000027:358892..359288- (Aspergillus niger ATCC 10864)
ATGCCTCACCAATACATCGTTCGTTTGTCGGATGTTGTTCCTGCCCCTGG
GTAAATGCTAACGATTTTCATTTTTAGGTCAGCCTCAACAAGGAGTCTCC
CCCTGAGGAGCTTGAGAAGTGAGTCTTACCACGCTTCACTCATGCAAAGA
TTAGCTCTAATATTTGTATGTGATCAGGGCCAAGAAGACTGCCACCGACA
ACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAAGGGATTCGTGTAT
GTACCCTCTCCGCTGTCACGCAGCTTTTCGTATTCCTCAACTAATTCTTG
ATAATTTAGTGTCCAATACGATGATGAGCAAGTCTCTACCCTCGAGTCCT
CCGACCACATCCACGTCGAGAAAGACAGCGAAGTCTCAATCCAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000027:358892..359288-

>ATCC10864_001421-T1 ID=ATCC10864_001421-T1|Name=ATCC10864_001421-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=864bp|location=Sequence derived from alignment at MCQH01000027:358892..359288- (Aspergillus niger ATCC 10864)
TGTCCAATACGATGATGAGCAAGTCTCTACCCTCGAGTCCTCCGACCACA
TCCACGTCGAGAAAGACAGCGAAGTCTCAATCCAGTAAGGCCAAGAAGAC
TGCCACCGACAACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAAGG
GATTCGTGTCAGCCTCAACAAGGAGTCTCCCCCTGAGGAGCTTGAGAAAT
GCCTCACCAATACATCTGTCCAATACGATGATGAGCAAGTCTCTACCCTC
GAGTCCTCCGACCACATCCACGTCGAGAAAGACAGCGAAGTCTCAATCCA
GTAAGGCCAAGAAGACTGCCACCGACAACGGAGGCAAGATCGTGAAGGAA
TTTGCGCTGGTCAAGGGATTCGTGTCAGCCTCAACAAGGAGTCTCCCCCT
GAGGAGCTTGAGAAATGCCTCACCAATACATCTGTCCAATACGATGATGA
GCAAGTCTCTACCCTCGAGTCCTCCGACCACATCCACGTCGAGAAAGACA
GCGAAGTCTCAATCCAGTAAGGCCAAGAAGACTGCCACCGACAACGGAGG
CAAGATCGTGAAGGAATTTGCGCTGGTCAAGGGATTCGTGTCAGCCTCAA
CAAGGAGTCTCCCCCTGAGGAGCTTGAGAAATGCCTCACCAATACATCTG
TCCAATACGATGATGAGCAAGTCTCTACCCTCGAGTCCTCCGACCACATC
CACGTCGAGAAAGACAGCGAAGTCTCAATCCAGTAAGGCCAAGAAGACTG
CCACCGACAACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAAGGGA
TTCGTGTCAGCCTCAACAAGGAGTCTCCCCCTGAGGAGCTTGAGAAATGC
CTCACCAATACATC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001421ATCC10864_001421Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001421-T1ATCC10864_001421-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001421-T1.cdsATCC10864_001421-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001421-T1.exon4ATCC10864_001421-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001421-T1.exon3ATCC10864_001421-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001421-T1.exon2ATCC10864_001421-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001421-T1.exon1ATCC10864_001421-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR037045
InterProIPR010259
PFAMPF05922
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:358892..359288 -
Powered by Drupal