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ATCC10864_001451-T1, ATCC10864_001451-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001451-T1
Unique NameATCC10864_001451-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:464906..466027+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001451-T1 ID=ATCC10864_001451-T1|Name=ATCC10864_001451-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1122bp|location=Sequence derived from alignment at MCQH01000027:464906..466027+ (Aspergillus niger ATCC 10864)
ATGGCTGAGACGACAAATGATACAGCTGCAACTGCAGCTGCAGCTGCGGA
CCCCCAACCGCCGGTTGTCACATTCAAAAAGCGCGGCGCAAAGGCGAGTC
AGAACATCCGCAAAAGACCAGCACCGCCTCCCGTATCGCAAGACGACGAT
TCTTCCGACTTTTCCTCCTCTGAAGACGAATCGGGTCACAGAATAAAGCG
CAGAAAGAACAAGGGTGCTGGGGTTGTCTCTGCTTCATCTGCGACTACCA
AGCCTGTCGATCGGGAACCTGCGGCCACCGCCACCGGGGATGGCAAAGTC
CAGCTTGCGGATACGAACGACGCCACAAAACACGTCGACTGGTTTGACGA
GGATTCTAAGGATGCGCGCTCATCGAAACCGCAATCTGCCTCGAATGAGC
CGCAGATGCCGGATGGCACATATAGGGGACTGGCGAACCAGACGTCATTC
ATCAAGAAGAATCCGAATGCGCCGAACAGGTCATTCGGACCGATCAAGGC
AGCGACCAATATCCGTACTATAACAGTGACGGACTACTCTCCAGATGTGT
GCAAGGACTACAAGCAGACTGGATTCTGTGGTTTCGGTGATAATTGGTGA
GTGCCGTCGCCCCTTTCACCCGACATACACATTTGCCACTCAATAGGGAG
CAGCTTATCTAATTGAAGCATACGCTAACTATTATTGTACAGTAAATTCC
TTCACGATCGAAGCGACTACAAACAAGGATGGGAACTGGATCGAGAGTGG
GAGACCGTCACCAAGGGCAAACAATTGAAGGGAACAGTGGTTGCGAGTGC
CGATCGGACAACGACGGAGAATAAAGACGACGATGAAGAGGCCATGCTGG
AAGACATCCCGTTTGCCTGTTTTATCTGCAAGGGGCCATACAGGGAGCCG
ATCGTCACGAAATGCGGTCACTACTTCTGCGAGCAGTGTGCTCTGCAAAG
ATACAGGAAGGACCCAAGCTGCGCAGCCTGTGGATCCGCCACGAATGGGT
TATTCAGTTCGGCCAAGAGATTGAAGAAGCTGCTAGAGCGCAAGAGGGAA
CTTGCGGCGAAGAGGAGACAAGAGGCTATCGAAGCTGGTGAGGAAGTGAG
TGACGAGGAAGACGAAGAATGA
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Coding sequence (CDS) from alignment at MCQH01000027:464906..466027+

>ATCC10864_001451-T1 ID=ATCC10864_001451-T1|Name=ATCC10864_001451-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2052bp|location=Sequence derived from alignment at MCQH01000027:464906..466027+ (Aspergillus niger ATCC 10864)
ATGGCTGAGACGACAAATGATACAGCTGCAACTGCAGCTGCAGCTGCGGA
CCCCCAACCGCCGGTTGTCACATTCAAAAAGCGCGGCGCAAAGGCGAGTC
AGAACATCCGCAAAAGACCAGCACCGCCTCCCGTATCGCAAGACGACGAT
TCTTCCGACTTTTCCTCCTCTGAAGACGAATCGGGTCACAGAATAAAGCG
CAGAAAGAACAAGGGTGCTGGGGTTGTCTCTGCTTCATCTGCGACTACCA
AGCCTGTCGATCGGGAACCTGCGGCCACCGCCACCGGGGATGGCAAAGTC
CAGCTTGCGGATACGAACGACGCCACAAAACACGTCGACTGGTTTGACGA
GGATTCTAAGGATGCGCGCTCATCGAAACCGCAATCTGCCTCGAATGAGC
CGCAGATGCCGGATGGCACATATAGGGGACTGGCGAACCAGACGTCATTC
ATCAAGAAGAATCCGAATGCGCCGAACAGGTCATTCGGACCGATCAAGGC
AGCGACCAATATCCGTACTATAACAGTGACGGACTACTCTCCAGATGTGT
GCAAGGACTACAAGCAGACTGGATTCTGTGGTTTCGGTGATAATTGTAAA
TTCCTTCACGATCGAAGCGACTACAAACAAGGATGGGAACTGGATCGAGA
GTGGGAGACCGTCACCAAGGGCAAACAATTGAAGGGAACAGTGGTTGCGA
GTGCCGATCGGACAACGACGGAGAATAAAGACGACGATGAAGAGGCCATG
CTGGAAGACATCCCGTTTGCCTGTTTTATCTGCAAGGGGCCATACAGGGA
GCCGATCGTCACGAAATGCGGTCACTACTTCTGCGAGCAGTGTGCTCTGC
AAAGATACAGGAAGGACCCAAGCTGCGCAGCCTGTGGATCCGCCACGAAT
GGGTTATTCAGTTCGGCCAAGAGATTGAAGAAGCTGCTAGAGCGCAAGAG
GGAACTTGCGGCGAAGAGGAGACAAGAGGCTATCGAAGCTGGTGAGGAAG
TGAGTGACGAGGAAGACGAAGAATGAATGGCTGAGACGACAAATGATACA
GCTGCAACTGCAGCTGCAGCTGCGGACCCCCAACCGCCGGTTGTCACATT
CAAAAAGCGCGGCGCAAAGGCGAGTCAGAACATCCGCAAAAGACCAGCAC
CGCCTCCCGTATCGCAAGACGACGATTCTTCCGACTTTTCCTCCTCTGAA
GACGAATCGGGTCACAGAATAAAGCGCAGAAAGAACAAGGGTGCTGGGGT
TGTCTCTGCTTCATCTGCGACTACCAAGCCTGTCGATCGGGAACCTGCGG
CCACCGCCACCGGGGATGGCAAAGTCCAGCTTGCGGATACGAACGACGCC
ACAAAACACGTCGACTGGTTTGACGAGGATTCTAAGGATGCGCGCTCATC
GAAACCGCAATCTGCCTCGAATGAGCCGCAGATGCCGGATGGCACATATA
GGGGACTGGCGAACCAGACGTCATTCATCAAGAAGAATCCGAATGCGCCG
AACAGGTCATTCGGACCGATCAAGGCAGCGACCAATATCCGTACTATAAC
AGTGACGGACTACTCTCCAGATGTGTGCAAGGACTACAAGCAGACTGGAT
TCTGTGGTTTCGGTGATAATTGTAAATTCCTTCACGATCGAAGCGACTAC
AAACAAGGATGGGAACTGGATCGAGAGTGGGAGACCGTCACCAAGGGCAA
ACAATTGAAGGGAACAGTGGTTGCGAGTGCCGATCGGACAACGACGGAGA
ATAAAGACGACGATGAAGAGGCCATGCTGGAAGACATCCCGTTTGCCTGT
TTTATCTGCAAGGGGCCATACAGGGAGCCGATCGTCACGAAATGCGGTCA
CTACTTCTGCGAGCAGTGTGCTCTGCAAAGATACAGGAAGGACCCAAGCT
GCGCAGCCTGTGGATCCGCCACGAATGGGTTATTCAGTTCGGCCAAGAGA
TTGAAGAAGCTGCTAGAGCGCAAGAGGGAACTTGCGGCGAAGAGGAGACA
AGAGGCTATCGAAGCTGGTGAGGAAGTGAGTGACGAGGAAGACGAAGAAT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC24ATCC10864_001451Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001451-T1.exon1ATCC10864_001451-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001451-T1.exon2ATCC10864_001451-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001451-T1.cdsATCC10864_001451-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001451-T1ATCC10864_001451-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001841
PFAMPF13920
InterProIPR017907
InterProIPR000571
InterProIPR039971
PFAMPF00642
PFAMPF00097
InterProIPR036855
InterProIPR013083
PFAMPF13445
PFAMPF13923
Properties
Property NameValue
ProductRNA-splicing factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:464906..466027 +
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