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ATCC10864_001630-T1, ATCC10864_001630-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001630-T1
Unique NameATCC10864_001630-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:1045857..1047215+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001630-T1 ID=ATCC10864_001630-T1|Name=ATCC10864_001630-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1359bp|location=Sequence derived from alignment at MCQH01000027:1045857..1047215+ (Aspergillus niger ATCC 10864)
ATGGATCGCTTCGTCTCCCGGAAGAGGCCCAGGAGCCCTCCACCACCAAC
AACCACTAACGAAGACTCCACCGACCTGAAATTGGCCCTCTTGATGTCAC
TCTTCCCAACCATGACCCTGGATACGCTGATGGAAATCTTGGTTTCGAGC
AATGGCTGCGTGGAAACAGCCTCATGCACTATTAAAGCTCAAACTCAAAG
CCAAATCCAATTTGGCTCTGCCTCTCCGTCCAAGAAACGCGCAAAAATCG
TCCCAGGAACCCCAGCCATCCAAACATGCTTACCATCAACTTCCCCGACC
ACCATCACCAGACCTCTCACAAAGAAAGGCCAAACCCTCCACCTCTATTC
CCCTTCCTCCATCGCCACTCACACTCCCTGCACCCTAATCCACAACTTCC
TCCCCCCATCACTCGCAAACGACCTCCTCACCGAACTCCTGTCCGAATCC
CCACACTTCACCAGACCCCACTTCCAACTGTTCGACCGAACAGTCCAAAG
CCCCCATTCAGCCAGCACTTACGTCTCCACGCCAGAAGACCACCACTCCC
ACACCTCGGAATATACTTACGGCGGCACCTACCGCTCCAACGTCCGGCAA
ATCACCCCGCACATGCGCACCGTCGCCGCCAAAGTCCAACACACTGTAAA
CGAACAGATCAAAGCCCGGGGCCCCAAACTGCCCTTTCAGTCACCACTGG
AATGGACCCCCAACGCCGCATTCGTGAACTGCTACGCTGGTCCCACTGAA
AGCGTAGGCTGGCACTCCGATGAACTGACGTATCTCGGCCCGAGACCCGT
CATCGGGAGCTTGAGTCTAGGCGTGGAGAGGGAGTTTCGCGTCAGGAAGA
TTCTCCCTGTTGACACCGACAATGAGGACGAAAACAATGGTGATGATGGA
GGCCAAATCTCTATCCACCTCCCCCACAACTCCCTCCTCATCATGCATGC
AGAGATGCAAGAAGAATGGAAACATGCCATTGTCCCTGCTAGGACTGTTA
TTCCGCATCCTGTCTCCGGTACGGCGAGGATAAATATCACCTATCGGTGG
TATCGCGAGTCGTTGCATCCGCGGTATACGCCCCGTTGTCGGTGCGGGGA
GCATACGGTTTTGAGGTGTGTGCAAAGGAAGAGGGGAAATCGGGGGAGGT
ATATGTGGATGTGCTATGCTGGGTTTGCGCCGGGGAAGAAGGGGTGTGGG
TTTTTTCAGTGGGCGGAGTTTGATGATGATGGGGAGCCGGTGTGGGGTCA
TCGTGAGAAAGGTAGTAGTGGTGATGAGGGTGCGCCGAGGTTGAGGAATT
TTGTGGAGGATGGAGTATGGAATGGGGATGAGGGTGAGGTTAAGGGTGAA
GTTGTATAG
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Coding sequence (CDS) from alignment at MCQH01000027:1045857..1047215+

>ATCC10864_001630-T1 ID=ATCC10864_001630-T1|Name=ATCC10864_001630-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1359bp|location=Sequence derived from alignment at MCQH01000027:1045857..1047215+ (Aspergillus niger ATCC 10864)
ATGGATCGCTTCGTCTCCCGGAAGAGGCCCAGGAGCCCTCCACCACCAAC
AACCACTAACGAAGACTCCACCGACCTGAAATTGGCCCTCTTGATGTCAC
TCTTCCCAACCATGACCCTGGATACGCTGATGGAAATCTTGGTTTCGAGC
AATGGCTGCGTGGAAACAGCCTCATGCACTATTAAAGCTCAAACTCAAAG
CCAAATCCAATTTGGCTCTGCCTCTCCGTCCAAGAAACGCGCAAAAATCG
TCCCAGGAACCCCAGCCATCCAAACATGCTTACCATCAACTTCCCCGACC
ACCATCACCAGACCTCTCACAAAGAAAGGCCAAACCCTCCACCTCTATTC
CCCTTCCTCCATCGCCACTCACACTCCCTGCACCCTAATCCACAACTTCC
TCCCCCCATCACTCGCAAACGACCTCCTCACCGAACTCCTGTCCGAATCC
CCACACTTCACCAGACCCCACTTCCAACTGTTCGACCGAACAGTCCAAAG
CCCCCATTCAGCCAGCACTTACGTCTCCACGCCAGAAGACCACCACTCCC
ACACCTCGGAATATACTTACGGCGGCACCTACCGCTCCAACGTCCGGCAA
ATCACCCCGCACATGCGCACCGTCGCCGCCAAAGTCCAACACACTGTAAA
CGAACAGATCAAAGCCCGGGGCCCCAAACTGCCCTTTCAGTCACCACTGG
AATGGACCCCCAACGCCGCATTCGTGAACTGCTACGCTGGTCCCACTGAA
AGCGTAGGCTGGCACTCCGATGAACTGACGTATCTCGGCCCGAGACCCGT
CATCGGGAGCTTGAGTCTAGGCGTGGAGAGGGAGTTTCGCGTCAGGAAGA
TTCTCCCTGTTGACACCGACAATGAGGACGAAAACAATGGTGATGATGGA
GGCCAAATCTCTATCCACCTCCCCCACAACTCCCTCCTCATCATGCATGC
AGAGATGCAAGAAGAATGGAAACATGCCATTGTCCCTGCTAGGACTGTTA
TTCCGCATCCTGTCTCCGGTACGGCGAGGATAAATATCACCTATCGGTGG
TATCGCGAGTCGTTGCATCCGCGGTATACGCCCCGTTGTCGGTGCGGGGA
GCATACGGTTTTGAGGTGTGTGCAAAGGAAGAGGGGAAATCGGGGGAGGT
ATATGTGGATGTGCTATGCTGGGTTTGCGCCGGGGAAGAAGGGGTGTGGG
TTTTTTCAGTGGGCGGAGTTTGATGATGATGGGGAGCCGGTGTGGGGTCA
TCGTGAGAAAGGTAGTAGTGGTGATGAGGGTGCGCCGAGGTTGAGGAATT
TTGTGGAGGATGGAGTATGGAATGGGGATGAGGGTGAGGTTAAGGGTGAA
GTTGTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0035552oxidative single-stranded DNA demethylation
GO:0006307DNA dealkylation involved in DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0043130ubiquitin binding
GO:0051213dioxygenase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001630ATCC10864_001630Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001630-T1.exon1ATCC10864_001630-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001630-T1.cdsATCC10864_001630-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001630-T1ATCC10864_001630-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005123
InterProIPR010666
InterProIPR032854
InterProIPR027450
InterProIPR037151
PFAMPF06839
PFAMPF13532
InterProIPR003892
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:1045857..1047215 +
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