You are here

ATCC10864_001701-T1, ATCC10864_001701-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001701-T1
Unique NameATCC10864_001701-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:166102..166830-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001701-T1 ID=ATCC10864_001701-T1|Name=ATCC10864_001701-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=729bp|location=Sequence derived from alignment at MCQH01000029:166102..166830- (Aspergillus niger ATCC 10864)
ATGGCTGTCGACGCTGCTACCCCCTCTTCGGTGTGTCACCACCATCCCCG TGCAATGATCGTACCTGGATAGCCCGCAATCCGAACGTCATCCGACTCCT CTCGCGTACCTATCCAGACGGACTACTCGTGACAATATACTTACTTTTCG ACTCGCATAGCCCGTTCCGATCCCCGAATTGACCAAGATCGCCACCGAGG TGCGTTCACTCATACCCTCACTTCCACCGACAAAGTACAACTACACCTTC TTTACCCCAGCTAACCACCGACCCCTCACCCCAATATAGGCCTGCGACAC TGCCCTCAAAGAAGTGACCGAATACGAACACACCAAAGTCGGCGACTGGA ACTCCCAAATTATTGTATCTACCCCACAACAACAACAACAACAACAACAA CAACCCCTCCTTGATCAAGCTAACCACTAAATCAAATCCAACAGAACACT ATCCTGAAAGCCCTCATCACCGCCACCGCCCCCTCCACCCCCTCGACTGC CCCTCCTTACCGCTTCACCGTGAACAGCACCATCGTGCAACAAGGCCTCA TCGACAAGTCCGCTGCCGCTGACGGCGCGACCAGCAACACCGGCAAGCGC GGGATGCACTCTGCGTCTGGTGCTTTCTGGGATGTGAACCGCGATGGTAT GTGGACGTTCAAGTATCCGGGTGCTGAGGAACGGGGTCTGGATGTTGTTG TTAGTGTGACGTGGTTTGCGCTGGGTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000029:166102..166830-

>ATCC10864_001701-T1 ID=ATCC10864_001701-T1|Name=ATCC10864_001701-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1716bp|location=Sequence derived from alignment at MCQH01000029:166102..166830- (Aspergillus niger ATCC 10864)
AACACTATCCTGAAAGCCCTCATCACCGCCACCGCCCCCTCCACCCCCTC
GACTGCCCCTCCTTACCGCTTCACCGTGAACAGCACCATCGTGCAACAAG
GCCTCATCGACAAGTCCGCTGCCGCTGACGGCGCGACCAGCAACACCGGC
AAGCGCGGGATGCACTCTGCGTCTGGTGCTTTCTGGGATGTGAACCGCGA
TGGTATGTGGACGTTCAAGTATCCGGGTGCTGAGGAACGGGGTCTGGATG
TTGTTGTTAGTGTGACGTGGTTTGCGCTGGGTTAGGCCTGCGACACTGCC
CTCAAAGAAGTGACCGAATACGAACACACCAAAGTCGGCGACTGGAACTC
CCAAATTATTCCCGTTCCGATCCCCGAATTGACCAAGATCGCCACCGAGA
TGGCTGTCGACGCTGCTACCCCCTCTTCGAACACTATCCTGAAAGCCCTC
ATCACCGCCACCGCCCCCTCCACCCCCTCGACTGCCCCTCCTTACCGCTT
CACCGTGAACAGCACCATCGTGCAACAAGGCCTCATCGACAAGTCCGCTG
CCGCTGACGGCGCGACCAGCAACACCGGCAAGCGCGGGATGCACTCTGCG
TCTGGTGCTTTCTGGGATGTGAACCGCGATGGTATGTGGACGTTCAAGTA
TCCGGGTGCTGAGGAACGGGGTCTGGATGTTGTTGTTAGTGTGACGTGGT
TTGCGCTGGGTTAGGCCTGCGACACTGCCCTCAAAGAAGTGACCGAATAC
GAACACACCAAAGTCGGCGACTGGAACTCCCAAATTATTCCCGTTCCGAT
CCCCGAATTGACCAAGATCGCCACCGAGATGGCTGTCGACGCTGCTACCC
CCTCTTCGAACACTATCCTGAAAGCCCTCATCACCGCCACCGCCCCCTCC
ACCCCCTCGACTGCCCCTCCTTACCGCTTCACCGTGAACAGCACCATCGT
GCAACAAGGCCTCATCGACAAGTCCGCTGCCGCTGACGGCGCGACCAGCA
ACACCGGCAAGCGCGGGATGCACTCTGCGTCTGGTGCTTTCTGGGATGTG
AACCGCGATGGTATGTGGACGTTCAAGTATCCGGGTGCTGAGGAACGGGG
TCTGGATGTTGTTGTTAGTGTGACGTGGTTTGCGCTGGGTTAGGCCTGCG
ACACTGCCCTCAAAGAAGTGACCGAATACGAACACACCAAAGTCGGCGAC
TGGAACTCCCAAATTATTCCCGTTCCGATCCCCGAATTGACCAAGATCGC
CACCGAGATGGCTGTCGACGCTGCTACCCCCTCTTCGAACACTATCCTGA
AAGCCCTCATCACCGCCACCGCCCCCTCCACCCCCTCGACTGCCCCTCCT
TACCGCTTCACCGTGAACAGCACCATCGTGCAACAAGGCCTCATCGACAA
GTCCGCTGCCGCTGACGGCGCGACCAGCAACACCGGCAAGCGCGGGATGC
ACTCTGCGTCTGGTGCTTTCTGGGATGTGAACCGCGATGGTATGTGGACG
TTCAAGTATCCGGGTGCTGAGGAACGGGGTCTGGATGTTGTTGTTAGTGT
GACGTGGTTTGCGCTGGGTTAGGCCTGCGACACTGCCCTCAAAGAAGTGA
CCGAATACGAACACACCAAAGTCGGCGACTGGAACTCCCAAATTATTCCC
GTTCCGATCCCCGAATTGACCAAGATCGCCACCGAGATGGCTGTCGACGC
TGCTACCCCCTCTTCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001701ATCC10864_001701Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001701-T1ATCC10864_001701-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001701-T1.cdsATCC10864_001701-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001701-T1.exon4ATCC10864_001701-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001701-T1.exon3ATCC10864_001701-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001701-T1.exon2ATCC10864_001701-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001701-T1.exon1ATCC10864_001701-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005334
PFAMPF03645
InterProIPR038586
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:166102..166830 -