You are here

Home

ATCC10864_001728-T1, ATCC10864_001728-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001728-T1
Unique NameATCC10864_001728-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:221153..222724-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001728-T1 ID=ATCC10864_001728-T1|Name=ATCC10864_001728-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1572bp|location=Sequence derived from alignment at MCQH01000029:221153..222724- (Aspergillus niger ATCC 10864)
ATGGCTGAAGCTGATTCCTTCCTTCACCTCGCTCGCCCTCTGGGCCCCGT
GGCAGTGGGGACTGCACCGACAACCGCCCCTCTGAACGTTGTCATCCAAC
CTCAGGTACGTGTTTTATGGCTGGATCAGGCAGCCCTCTTCGACCGGAGC
CAGAATGCTAATACTATGGGCTAGGCGCTCTTCTCGATCCTGGACCACTC
CCTTCGTCGCAACGCTGACCAGGAGCGTGTCATCGGTACTCTGCTGGGAA
CCAGATCCGAGGATGGAACCGAGGTGGAAATCCGCAGCACTTTCGCTGTT
GGACACACGGAGACGACAGACCAGGTTGAGGTGGACATGGAATACCAGAA
GCAGATGCTTGCGTTGCACCTGAAGGCCAACCCCAAGGAAGTGCTCGTGG
GTTGGTACGCCACCTCGTCCGAGCTGAACACCTTTTCCGCTTTGATCCAG
AACTTCTACAGCGGCCAGGGTGATGGCACATGGCCTCACCCTGCCGTCCA
CTTGACCGTGTCCACCGAGGCTGGCAAGGATATCGAGACCCGCGCCTACA
TCTCCGCCCCCGTTGGTGTGACCGCGGAGAGAGCCGCCGACAGCGCCGCC
TTCATCCCCGTCCCTTACGAGATCCGCTACGGCGAGGCCGAGAAGAGTGG
TCTGGAGGCTATTGCTGCGGCCCGTGATGCCGAGGAGCGCCGTGCCAACA
TCTTCACTGATATCGAGGCTCTGGAGCGTGCGATTGAGGATGTTCTGGGC
ATGATCGACCGGGTTTCCCGCTACGTTGAGTCTGTCATTGACGAGGAGGC
TCCTGCTTCGACGGCCTTGGGCCAGTACCTGCTCAACACCTTGGCTCTGG
CGCCTAAGGTTGAGCCTGCTGACATTGAGCGTGACTTGTATGTTGCCCCC
CTCCCCTCTTCTTCCCTTACCCCCCTAGTTATCAGCCCAATATCAAGTAC
CAAACTAACCGAAATCAACAGCAACAACCACATCCAGGACGTCCTGGTCG
TGTCCTACCTGGCCAACACCATCCGTACACAGATGGAGCTGTCCAACCGG
CTAGCAACCGCCCAGCTGACTCTGGGAGGCGAGTCCGGCAGCGGCGAGTC
GGGCGACAAGCGCGGCGGCCAACGGGGCGGCAAAGGAGGCCGGGGCGGGC
AACAGCGGACTCAAGAACGGGGCGGAGAGGAGGCTCGCGCGTAAGAGGAT
ATCATAGGGTTATTATAACGATACCTTTCCATTTCTCTTTTAACATTTAT
TTCATTTGTGCAAAAATTCTTTTCTTCTTTCAATTTCCCTCGCCACGCAA
CAAAAAGCATGTCCCCTTGATATCTTTCTATTTCCTGGATATATGATATG
TTTCCAGTCCATATCCGTTCCTGTGCCAGCCAAGGAGAACTCGTGTGTGG
GTTGAAGCCTGGTTCCGCATCTGGCATGGCAGGCATCACATCCAACCAAT
ACGCACCCTATCAATGATCACCTGTCTTTCTCAGGAAAGAAACTGCGCAT
AATATTGGACGGATAGGATCATACGAAGAACGAACCAACGAAGCCCAAAA
TGGAAAGGAGGAAAAGAAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000029:221153..222724-

>ATCC10864_001728-T1 ID=ATCC10864_001728-T1|Name=ATCC10864_001728-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5640bp|location=Sequence derived from alignment at MCQH01000029:221153..222724- (Aspergillus niger ATCC 10864)
GATCATACGAAGAACGAACCAACGAAGCCCAAAATGGAAAGGAGGAAAAG
AAATAATCCATATCCGTTCCTGTGCCAGCCAAGGAGAACTCCAACAACCA
CATCCAGGACGTCCTGGTCGTGTCCTACCTGGCCAACACCATCCGTACAC
AGATGGAGCTGTCCAACCGGCTAGCAACCGCCCAGCTGACTCTGGGAGGC
GAGTCCGGCAGCGGCGAGTCGGGCGACAAGCGCGGCGGCCAACGGGGCGG
CAAAGGAGGCCGGGGCGGGCAACAGCGGACTCAAGAACGGGGCGGAGAGG
AGGCTCGCGCGCGCTCTTCTCGATCCTGGACCACTCCCTTCGTCGCAACG
CTGACCAGGAGCGTGTCATCGGTACTCTGCTGGGAACCAGATCCGAGGAT
GGAACCGAGGTGGAAATCCGCAGCACTTTCGCTGTTGGACACACGGAGAC
GACAGACCAGGTTGAGGTGGACATGGAATACCAGAAGCAGATGCTTGCGT
TGCACCTGAAGGCCAACCCCAAGGAAGTGCTCGTGGGTTGGTACGCCACC
TCGTCCGAGCTGAACACCTTTTCCGCTTTGATCCAGAACTTCTACAGCGG
CCAGGGTGATGGCACATGGCCTCACCCTGCCGTCCACTTGACCGTGTCCA
CCGAGGCTGGCAAGGATATCGAGACCCGCGCCTACATCTCCGCCCCCGTT
GGTGTGACCGCGGAGAGAGCCGCCGACAGCGCCGCCTTCATCCCCGTCCC
TTACGAGATCCGCTACGGCGAGGCCGAGAAGAGTGGTCTGGAGGCTATTG
CTGCGGCCCGTGATGCCGAGGAGCGCCGTGCCAACATCTTCACTGATATC
GAGGCTCTGGAGCGTGCGATTGAGGATGTTCTGGGCATGATCGACCGGGT
TTCCCGCTACGTTGAGTCTGTCATTGACGAGGAGGCTCCTGCTTCGACGG
CCTTGGGCCAGTACCTGCTCAACACCTTGGCTCTGGCGCCTAAGGTTGAG
CCTGCTGACATTGAGCGTGACTTATGGCTGAAGCTGATTCCTTCCTTCAC
CTCGCTCGCCCTCTGGGCCCCGTGGCAGTGGGGACTGCACCGACAACCGC
CCCTCTGAACGTTGTCATCCAACCTCAGGATCATACGAAGAACGAACCAA
CGAAGCCCAAAATGGAAAGGAGGAAAAGAAATAATCCATATCCGTTCCTG
TGCCAGCCAAGGAGAACTCCAACAACCACATCCAGGACGTCCTGGTCGTG
TCCTACCTGGCCAACACCATCCGTACACAGATGGAGCTGTCCAACCGGCT
AGCAACCGCCCAGCTGACTCTGGGAGGCGAGTCCGGCAGCGGCGAGTCGG
GCGACAAGCGCGGCGGCCAACGGGGCGGCAAAGGAGGCCGGGGCGGGCAA
CAGCGGACTCAAGAACGGGGCGGAGAGGAGGCTCGCGCGCGCTCTTCTCG
ATCCTGGACCACTCCCTTCGTCGCAACGCTGACCAGGAGCGTGTCATCGG
TACTCTGCTGGGAACCAGATCCGAGGATGGAACCGAGGTGGAAATCCGCA
GCACTTTCGCTGTTGGACACACGGAGACGACAGACCAGGTTGAGGTGGAC
ATGGAATACCAGAAGCAGATGCTTGCGTTGCACCTGAAGGCCAACCCCAA
GGAAGTGCTCGTGGGTTGGTACGCCACCTCGTCCGAGCTGAACACCTTTT
CCGCTTTGATCCAGAACTTCTACAGCGGCCAGGGTGATGGCACATGGCCT
CACCCTGCCGTCCACTTGACCGTGTCCACCGAGGCTGGCAAGGATATCGA
GACCCGCGCCTACATCTCCGCCCCCGTTGGTGTGACCGCGGAGAGAGCCG
CCGACAGCGCCGCCTTCATCCCCGTCCCTTACGAGATCCGCTACGGCGAG
GCCGAGAAGAGTGGTCTGGAGGCTATTGCTGCGGCCCGTGATGCCGAGGA
GCGCCGTGCCAACATCTTCACTGATATCGAGGCTCTGGAGCGTGCGATTG
AGGATGTTCTGGGCATGATCGACCGGGTTTCCCGCTACGTTGAGTCTGTC
ATTGACGAGGAGGCTCCTGCTTCGACGGCCTTGGGCCAGTACCTGCTCAA
CACCTTGGCTCTGGCGCCTAAGGTTGAGCCTGCTGACATTGAGCGTGACT
TATGGCTGAAGCTGATTCCTTCCTTCACCTCGCTCGCCCTCTGGGCCCCG
TGGCAGTGGGGACTGCACCGACAACCGCCCCTCTGAACGTTGTCATCCAA
CCTCAGGATCATACGAAGAACGAACCAACGAAGCCCAAAATGGAAAGGAG
GAAAAGAAATAATCCATATCCGTTCCTGTGCCAGCCAAGGAGAACTCCAA
CAACCACATCCAGGACGTCCTGGTCGTGTCCTACCTGGCCAACACCATCC
GTACACAGATGGAGCTGTCCAACCGGCTAGCAACCGCCCAGCTGACTCTG
GGAGGCGAGTCCGGCAGCGGCGAGTCGGGCGACAAGCGCGGCGGCCAACG
GGGCGGCAAAGGAGGCCGGGGCGGGCAACAGCGGACTCAAGAACGGGGCG
GAGAGGAGGCTCGCGCGCGCTCTTCTCGATCCTGGACCACTCCCTTCGTC
GCAACGCTGACCAGGAGCGTGTCATCGGTACTCTGCTGGGAACCAGATCC
GAGGATGGAACCGAGGTGGAAATCCGCAGCACTTTCGCTGTTGGACACAC
GGAGACGACAGACCAGGTTGAGGTGGACATGGAATACCAGAAGCAGATGC
TTGCGTTGCACCTGAAGGCCAACCCCAAGGAAGTGCTCGTGGGTTGGTAC
GCCACCTCGTCCGAGCTGAACACCTTTTCCGCTTTGATCCAGAACTTCTA
CAGCGGCCAGGGTGATGGCACATGGCCTCACCCTGCCGTCCACTTGACCG
TGTCCACCGAGGCTGGCAAGGATATCGAGACCCGCGCCTACATCTCCGCC
CCCGTTGGTGTGACCGCGGAGAGAGCCGCCGACAGCGCCGCCTTCATCCC
CGTCCCTTACGAGATCCGCTACGGCGAGGCCGAGAAGAGTGGTCTGGAGG
CTATTGCTGCGGCCCGTGATGCCGAGGAGCGCCGTGCCAACATCTTCACT
GATATCGAGGCTCTGGAGCGTGCGATTGAGGATGTTCTGGGCATGATCGA
CCGGGTTTCCCGCTACGTTGAGTCTGTCATTGACGAGGAGGCTCCTGCTT
CGACGGCCTTGGGCCAGTACCTGCTCAACACCTTGGCTCTGGCGCCTAAG
GTTGAGCCTGCTGACATTGAGCGTGACTTATGGCTGAAGCTGATTCCTTC
CTTCACCTCGCTCGCCCTCTGGGCCCCGTGGCAGTGGGGACTGCACCGAC
AACCGCCCCTCTGAACGTTGTCATCCAACCTCAGGATCATACGAAGAACG
AACCAACGAAGCCCAAAATGGAAAGGAGGAAAAGAAATAATCCATATCCG
TTCCTGTGCCAGCCAAGGAGAACTCCAACAACCACATCCAGGACGTCCTG
GTCGTGTCCTACCTGGCCAACACCATCCGTACACAGATGGAGCTGTCCAA
CCGGCTAGCAACCGCCCAGCTGACTCTGGGAGGCGAGTCCGGCAGCGGCG
AGTCGGGCGACAAGCGCGGCGGCCAACGGGGCGGCAAAGGAGGCCGGGGC
GGGCAACAGCGGACTCAAGAACGGGGCGGAGAGGAGGCTCGCGCGCGCTC
TTCTCGATCCTGGACCACTCCCTTCGTCGCAACGCTGACCAGGAGCGTGT
CATCGGTACTCTGCTGGGAACCAGATCCGAGGATGGAACCGAGGTGGAAA
TCCGCAGCACTTTCGCTGTTGGACACACGGAGACGACAGACCAGGTTGAG
GTGGACATGGAATACCAGAAGCAGATGCTTGCGTTGCACCTGAAGGCCAA
CCCCAAGGAAGTGCTCGTGGGTTGGTACGCCACCTCGTCCGAGCTGAACA
CCTTTTCCGCTTTGATCCAGAACTTCTACAGCGGCCAGGGTGATGGCACA
TGGCCTCACCCTGCCGTCCACTTGACCGTGTCCACCGAGGCTGGCAAGGA
TATCGAGACCCGCGCCTACATCTCCGCCCCCGTTGGTGTGACCGCGGAGA
GAGCCGCCGACAGCGCCGCCTTCATCCCCGTCCCTTACGAGATCCGCTAC
GGCGAGGCCGAGAAGAGTGGTCTGGAGGCTATTGCTGCGGCCCGTGATGC
CGAGGAGCGCCGTGCCAACATCTTCACTGATATCGAGGCTCTGGAGCGTG
CGATTGAGGATGTTCTGGGCATGATCGACCGGGTTTCCCGCTACGTTGAG
TCTGTCATTGACGAGGAGGCTCCTGCTTCGACGGCCTTGGGCCAGTACCT
GCTCAACACCTTGGCTCTGGCGCCTAAGGTTGAGCCTGCTGACATTGAGC
GTGACTTATGGCTGAAGCTGATTCCTTCCTTCACCTCGCTCGCCCTCTGG
GCCCCGTGGCAGTGGGGACTGCACCGACAACCGCCCCTCTGAACGTTGTC
ATCCAACCTCAGGATCATACGAAGAACGAACCAACGAAGCCCAAAATGGA
AAGGAGGAAAAGAAATAATCCATATCCGTTCCTGTGCCAGCCAAGGAGAA
CTCCAACAACCACATCCAGGACGTCCTGGTCGTGTCCTACCTGGCCAACA
CCATCCGTACACAGATGGAGCTGTCCAACCGGCTAGCAACCGCCCAGCTG
ACTCTGGGAGGCGAGTCCGGCAGCGGCGAGTCGGGCGACAAGCGCGGCGG
CCAACGGGGCGGCAAAGGAGGCCGGGGCGGGCAACAGCGGACTCAAGAAC
GGGGCGGAGAGGAGGCTCGCGCGCGCTCTTCTCGATCCTGGACCACTCCC
TTCGTCGCAACGCTGACCAGGAGCGTGTCATCGGTACTCTGCTGGGAACC
AGATCCGAGGATGGAACCGAGGTGGAAATCCGCAGCACTTTCGCTGTTGG
ACACACGGAGACGACAGACCAGGTTGAGGTGGACATGGAATACCAGAAGC
AGATGCTTGCGTTGCACCTGAAGGCCAACCCCAAGGAAGTGCTCGTGGGT
TGGTACGCCACCTCGTCCGAGCTGAACACCTTTTCCGCTTTGATCCAGAA
CTTCTACAGCGGCCAGGGTGATGGCACATGGCCTCACCCTGCCGTCCACT
TGACCGTGTCCACCGAGGCTGGCAAGGATATCGAGACCCGCGCCTACATC
TCCGCCCCCGTTGGTGTGACCGCGGAGAGAGCCGCCGACAGCGCCGCCTT
CATCCCCGTCCCTTACGAGATCCGCTACGGCGAGGCCGAGAAGAGTGGTC
TGGAGGCTATTGCTGCGGCCCGTGATGCCGAGGAGCGCCGTGCCAACATC
TTCACTGATATCGAGGCTCTGGAGCGTGCGATTGAGGATGTTCTGGGCAT
GATCGACCGGGTTTCCCGCTACGTTGAGTCTGTCATTGACGAGGAGGCTC
CTGCTTCGACGGCCTTGGGCCAGTACCTGCTCAACACCTTGGCTCTGGCG
CCTAAGGTTGAGCCTGCTGACATTGAGCGTGACTTATGGCTGAAGCTGAT
TCCTTCCTTCACCTCGCTCGCCCTCTGGGCCCCGTGGCAGTGGGGACTGC
ACCGACAACCGCCCCTCTGAACGTTGTCATCCAACCTCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008237metallopeptidase activity
GO:0003743translation initiation factor activity
GO:0031369translation initiation factor binding
GO:0070122isopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001728ATCC10864_001728Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001728-T1ATCC10864_001728-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001728-T1.cdsATCC10864_001728-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001728-T1.exon5ATCC10864_001728-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_001728-T1.exon4ATCC10864_001728-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001728-T1.exon3ATCC10864_001728-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001728-T1.exon2ATCC10864_001728-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001728-T1.exon1ATCC10864_001728-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000555
InterProIPR037518
InterProIPR024969
PFAMPF01398
PFAMPF13012
InterProIPR027531
Properties
Property NameValue
NoteMEROPS:MER0030133
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:221153..222724 -
Powered by Drupal