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ATCC10864_001798-T1, ATCC10864_001798-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001798-T1
Unique NameATCC10864_001798-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:394455..395628-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001798-T1 ID=ATCC10864_001798-T1|Name=ATCC10864_001798-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1174bp|location=Sequence derived from alignment at MCQH01000029:394455..395628- (Aspergillus niger ATCC 10864)
ATGTCGTTTTCAAACCTTGTTTCTGACCTTGCGTTCAGAGACGCTCAGGA
TGACCGAAGTTCTCAAATATCCCATGCACGGTCTCAAGCTACCGCTCGAT
CATATACCAGCACGGCTGCGACCAGCGTTAGCATATCTGGTGATATCTCT
AGCCAGCTTCATTCTGGCTATAGTCATCCACTGAGTAGATCATGGCAAGC
CGAGAAGCAGTTGACCAAGGTTCGTACTACGACATAGTCCTGTACTAGCA
TGGTCTAATTGTGTGCAGGAGATGCTCATATATCCCCTTTTCATTACCGA
TAACCCTGATGAGGAGACGCCTATTCCATCCCTTCCAAATCAGTATCGCC
GAGGACTGAATCGGTTGGTCCCCTTCTTAAGACCATTAGTACAGAAAGGC
CTGCGTTCCGTGATTCTGTTCGGTGTCCCTTTGCATCCATCTGCAAAGGA
TGCGCTGGGAACCGCTGCAGATGACCCGACCGGTCCAGTAGTTCAGGCCA
TCCGCCTTCTTCGTTCGCGCTTTCCTCAACTTTATATCGTGACGGATGTT
TGTCTTTGTGAATACACCTCACATGGTCATTGCGGGATACTACGTGAGGA
TGGGACGCTCGATAACGCACAGTCCGTTGATAGAATCTCAGATGTAGCCC
TCGCCTATGCTGCTGCCGGTGCTCACTGCGTGGCTCCGTCAGATATGAAT
GACGGCAGAGTCCGCGCCATAAAGCTGAAGCTTATTGAAGCTGGCATAGC
TCATCGTGTCCTCCTAATGTCCTACAGTGCAAAATTCAGTGGATGTCTAT
ATGGTCCCTTCCGAGATGCCGCAGGCTCTTGCCCATCCTTCGGAGACCGC
AGGTGTTACCAATTACCCCCAGGTGGCCGGGGGCTTGCTCGGCGAGCGAT
ACAGCGCGATATTGGTGAGGGCGCAGACATCATAATGGTGAAGCCCGCTA
GTAGCTATTTGGATATCATACGGGACGCCAAAGAGCTCGCCAAAGACATG
CCAGTTGCCGCTTACCAAGTTAGCGGAGAGTATGCCATGATACATGCAGG
GGCTAAGGCTGGCGTTTTCGATTTGAAATCAATGGCTTTCGAGAGCACAG
AGGGTATACTACGGGCAGGAGCTGGTATTATTGTGAGCTACTTTGTGCCC
GACTTTCTGGATTGGCTTTCTTAA
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Coding sequence (CDS) from alignment at MCQH01000029:394455..395628-

>ATCC10864_001798-T1 ID=ATCC10864_001798-T1|Name=ATCC10864_001798-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2250bp|location=Sequence derived from alignment at MCQH01000029:394455..395628- (Aspergillus niger ATCC 10864)
GAGATGCTCATATATCCCCTTTTCATTACCGATAACCCTGATGAGGAGAC
GCCTATTCCATCCCTTCCAAATCAGTATCGCCGAGGACTGAATCGGTTGG
TCCCCTTCTTAAGACCATTAGTACAGAAAGGCCTGCGTTCCGTGATTCTG
TTCGGTGTCCCTTTGCATCCATCTGCAAAGGATGCGCTGGGAACCGCTGC
AGATGACCCGACCGGTCCAGTAGTTCAGGCCATCCGCCTTCTTCGTTCGC
GCTTTCCTCAACTTTATATCGTGACGGATGTTTGTCTTTGTGAATACACC
TCACATGGTCATTGCGGGATACTACGTGAGGATGGGACGCTCGATAACGC
ACAGTCCGTTGATAGAATCTCAGATGTAGCCCTCGCCTATGCTGCTGCCG
GTGCTCACTGCGTGGCTCCGTCAGATATGAATGACGGCAGAGTCCGCGCC
ATAAAGCTGAAGCTTATTGAAGCTGGCATAGCTCATCGTGTCCTCCTAAT
GTCCTACAGTGCAAAATTCAGTGGATGTCTATATGGTCCCTTCCGAGATG
CCGCAGGCTCTTGCCCATCCTTCGGAGACCGCAGGTGTTACCAATTACCC
CCAGGTGGCCGGGGGCTTGCTCGGCGAGCGATACAGCGCGATATTGGTGA
GGGCGCAGACATCATAATGGTGAAGCCCGCTAGTAGCTATTTGGATATCA
TACGGGACGCCAAAGAGCTCGCCAAAGACATGCCAGTTGCCGCTTACCAA
GTTAGCGGAGAGTATGCCATGATACATGCAGGGGCTAAGGCTGGCGTTTT
CGATTTGAAATCAATGGCTTTCGAGAGCACAGAGGGTATACTACGGGCAG
GAGCTGGTATTATTGTGAGCTACTTTGTGCCCGACTTTCTGGATTGGCTT
TCTTAAATGTCGTTTTCAAACCTTGTTTCTGACCTTGCGTTCAGAGACGC
TCAGGATGACCGAAGTTCTCAAATATCCCATGCACGGTCTCAAGCTACCG
CTCGATCATATACCAGCACGGCTGCGACCAGCGTTAGCATATCTGGTGAT
ATCTCTAGCCAGCTTCATTCTGGCTATAGTCATCCACTGAGTAGATCATG
GCAAGCCGAGAAGCAGTTGACCAAGGAGATGCTCATATATCCCCTTTTCA
TTACCGATAACCCTGATGAGGAGACGCCTATTCCATCCCTTCCAAATCAG
TATCGCCGAGGACTGAATCGGTTGGTCCCCTTCTTAAGACCATTAGTACA
GAAAGGCCTGCGTTCCGTGATTCTGTTCGGTGTCCCTTTGCATCCATCTG
CAAAGGATGCGCTGGGAACCGCTGCAGATGACCCGACCGGTCCAGTAGTT
CAGGCCATCCGCCTTCTTCGTTCGCGCTTTCCTCAACTTTATATCGTGAC
GGATGTTTGTCTTTGTGAATACACCTCACATGGTCATTGCGGGATACTAC
GTGAGGATGGGACGCTCGATAACGCACAGTCCGTTGATAGAATCTCAGAT
GTAGCCCTCGCCTATGCTGCTGCCGGTGCTCACTGCGTGGCTCCGTCAGA
TATGAATGACGGCAGAGTCCGCGCCATAAAGCTGAAGCTTATTGAAGCTG
GCATAGCTCATCGTGTCCTCCTAATGTCCTACAGTGCAAAATTCAGTGGA
TGTCTATATGGTCCCTTCCGAGATGCCGCAGGCTCTTGCCCATCCTTCGG
AGACCGCAGGTGTTACCAATTACCCCCAGGTGGCCGGGGGCTTGCTCGGC
GAGCGATACAGCGCGATATTGGTGAGGGCGCAGACATCATAATGGTGAAG
CCCGCTAGTAGCTATTTGGATATCATACGGGACGCCAAAGAGCTCGCCAA
AGACATGCCAGTTGCCGCTTACCAAGTTAGCGGAGAGTATGCCATGATAC
ATGCAGGGGCTAAGGCTGGCGTTTTCGATTTGAAATCAATGGCTTTCGAG
AGCACAGAGGGTATACTACGGGCAGGAGCTGGTATTATTGTGAGCTACTT
TGTGCCCGACTTTCTGGATTGGCTTTCTTAAATGTCGTTTTCAAACCTTG
TTTCTGACCTTGCGTTCAGAGACGCTCAGGATGACCGAAGTTCTCAAATA
TCCCATGCACGGTCTCAAGCTACCGCTCGATCATATACCAGCACGGCTGC
GACCAGCGTTAGCATATCTGGTGATATCTCTAGCCAGCTTCATTCTGGCT
ATAGTCATCCACTGAGTAGATCATGGCAAGCCGAGAAGCAGTTGACCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004655porphobilinogen synthase activity
GO:0003824catalytic activity
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HEM2ATCC10864_001798Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001798-T1ATCC10864_001798-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001798-T1.cdsATCC10864_001798-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001798-T1.exon2ATCC10864_001798-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001798-T1.exon1ATCC10864_001798-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013785
InterProIPR030656
InterProIPR001731
PFAMPF00490
Properties
Property NameValue
NoteBUSCO:EOG092630N3
ProductAminolevulinate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:394455..395628 -
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